RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 TRAV13-2A0A0B4J235 113 aa14.24□□□□□ -0.13
SOX17-201ENST00000297316 NHLRC4P0CG21 123 aaPredicted RBP14.23□□□□□ -0.13
SOX17-201ENST00000297316 DNAH1Q9P2D7 4330 aa14.22□□□□□ -0.13
SOX17-201ENST00000297316 PLECQ15149 4684 aaKnown RBP14.22□□□□□ -0.13
SOX17-201ENST00000297316 IGKV2D-24A0A075B6R9 120 aa14.21□□□□□ -0.13
SOX17-201ENST00000297316 GAGE2BQ13066 116 aa14.21□□□□□ -0.13
SOX17-201ENST00000297316 GAGE2EQ4V326 116 aa14.21□□□□□ -0.13
SOX17-201ENST00000297316 ANAPC13Q9BS18 74 aa14.21□□□□□ -0.13
SOX17-201ENST00000297316 GAGE2DQ9UEU5 116 aa14.21□□□□□ -0.13
SOX17-201ENST00000297316 DNAH7Q8WXX0 4024 aa14.21□□□□□ -0.13
SOX17-201ENST00000297316 COX17Q14061 63 aa14.21□□□□□ -0.13
SOX17-201ENST00000297316 PRR3P79522 188 aaKnown RBP14.2□□□□□ -0.14
SOX17-201ENST00000297316 Q8NDZ9 215 aa14.2□□□□□ -0.14
SOX17-201ENST00000297316 C1orf43Q9BWL3 253 aa14.2□□□□□ -0.14
SOX17-201ENST00000297316 HIGD2BQ4VC39 106 aa14.19□□□□□ -0.14
SOX17-201ENST00000297316 APLNQ9ULZ1 77 aa14.19□□□□□ -0.14
SOX17-201ENST00000297316 SMIM11BQ8TCY0 68 aa14.19□□□□□ -0.14
SOX17-201ENST00000297316 RPL28P46779 137 aaKnown RBP14.18□□□□□ -0.14
SOX17-201ENST00000297316 FAM218AQ96MZ4 157 aa14.18□□□□□ -0.14
SOX17-201ENST00000297316 KRTAP21-3Q3LHN1 58 aa14.17□□□□□ -0.14
SOX17-201ENST00000297316 C6orf48Q9UBA6 75 aa14.17□□□□□ -0.14
SOX17-201ENST00000297316 C15orf56Q8N910 161 aa14.16□□□□□ -0.14
SOX17-201ENST00000297316 STARD9Q9P2P6 4700 aa14.16□□□□□ -0.14
SOX17-201ENST00000297316 UPK3BQ9BT76 320 aa14.16□□□□□ -0.14
SOX17-201ENST00000297316 FAM240AA0A1B0GVK7 77 aa14.15□□□□□ -0.14
SOX17-201ENST00000297316 TTC32Q5I0X7 151 aa14.15□□□□□ -0.14
SOX17-201ENST00000297316 OR13C6PQ8NH95 151 aa14.15□□□□□ -0.14
SOX17-201ENST00000297316 Q6Q795 121 aa14.14□□□□□ -0.15
SOX17-201ENST00000297316 NDUFV3P56181 108 aaKnown RBP14.13□□□□□ -0.15
SOX17-201ENST00000297316 CASC10Q5T4H9 136 aa14.13□□□□□ -0.15
SOX17-201ENST00000297316 GVQW2A0A096LPI5 108 aaPredicted RBP14.12□□□□□ -0.15
SOX17-201ENST00000297316 KRTAP1-5Q9BYS1 174 aa14.11□□□□□ -0.15
SOX17-201ENST00000297316 DNAH10Q8IVF4 4471 aa14.11□□□□□ -0.15
SOX17-201ENST00000297316 ZNF561-AS1K7EIQ3 104 aa14.1□□□□□ -0.15
SOX17-201ENST00000297316 NDUFC2O95298 119 aa14.1□□□□□ -0.15
SOX17-201ENST00000297316 TRACP01848 142 aa14.1□□□□□ -0.15
SOX17-201ENST00000297316 FBN3Q75N90 2809 aa14.1□□□□□ -0.15
SOX17-201ENST00000297316 UBE2DNLQ8IWF7 75 aa14.1□□□□□ -0.15
SOX17-201ENST00000297316 NCR3O14931 201 aa14.09□□□□□ -0.15
SOX17-201ENST00000297316 CAMK2N2Q96S95 79 aa14.09□□□□□ -0.15
SOX17-201ENST00000297316 Q6ZRU5 148 aa14.08□□□□□ -0.16
SOX17-201ENST00000297316 A0A087WYN8 130 aa14.07□□□□□ -0.16
SOX17-201ENST00000297316 NUPR2A6NF83 97 aa14.07□□□□□ -0.16
SOX17-201ENST00000297316 BAALC-AS2P0C853 105 aa14.07□□□□□ -0.16
SOX17-201ENST00000297316 XAGE1AQ9HD64 81 aa14.06□□□□□ -0.16
SOX17-201ENST00000297316 C22orf24Q9Y442 160 aa14.04□□□□□ -0.16
SOX17-201ENST00000297316 MUC7Q8TAX7 377 aa14.04□□□□□ -0.16
SOX17-201ENST00000297316 TGP01266 2768 aa14.04□□□□□ -0.16
SOX17-201ENST00000297316 LECT2O14960 151 aa14.03□□□□□ -0.16
SOX17-201ENST00000297316 ACYP1P07311 99 aa14.03□□□□□ -0.16
SOX17-201ENST00000297316 C2orf48Q96LS8 159 aa14.02□□□□□ -0.16
SOX17-201ENST00000297316 TMEM126AQ9H061 195 aa14.01□□□□□ -0.17
SOX17-201ENST00000297316 USP17L23D6RBM5 183 aa14□□□□□ -0.17
SOX17-201ENST00000297316 TRBV7-7A0A0K0K1E9 115 aa13.99□□□□□ -0.17
SOX17-201ENST00000297316 H0YGX0 51 aa13.99□□□□□ -0.17
SOX17-201ENST00000297316 RPL18AQ02543 176 aaKnown RBP13.99□□□□□ -0.17
SOX17-201ENST00000297316 B5MCH6 92 aa13.98□□□□□ -0.17
SOX17-201ENST00000297316 CCDC179H3BU77 68 aa13.98□□□□□ -0.17
SOX17-201ENST00000297316 SMCR5Q8TEV8 140 aa13.98□□□□□ -0.17
SOX17-201ENST00000297316 SLPIP03973 132 aa13.97□□□□□ -0.17
SOX17-201ENST00000297316 RMI2Q96E14 147 aa13.97□□□□□ -0.17
SOX17-201ENST00000297316 SS18L2Q9UHA2 77 aa13.97□□□□□ -0.17
SOX17-201ENST00000297316 VPS13DQ5THJ4 4388 aa13.96□□□□□ -0.17
SOX17-201ENST00000297316 S100A7L2Q5SY68 101 aa13.96□□□□□ -0.17
SOX17-201ENST00000297316 NDUFC2-KCTD14E9PQ53 114 aa13.95□□□□□ -0.18
SOX17-201ENST00000297316 SYCNQ0VAF6 134 aa13.95□□□□□ -0.18
SOX17-201ENST00000297316 Q6ZRP5 223 aa13.95□□□□□ -0.18
SOX17-201ENST00000297316 C6orf99Q4VX62 202 aa13.95□□□□□ -0.18
SOX17-201ENST00000297316 DNAL4O96015 105 aa13.93□□□□□ -0.18
SOX17-201ENST00000297316 IGLV6-57P01721 117 aa13.93□□□□□ -0.18
SOX17-201ENST00000297316 INAFM2P0DMQ5 153 aa13.93□□□□□ -0.18
SOX17-201ENST00000297316 VPREB1P12018 145 aa13.92□□□□□ -0.18
SOX17-201ENST00000297316 LINC00643Q86TS7 51 aa13.91□□□□□ -0.18
SOX17-201ENST00000297316 TRBV10-3A0A0K0K1G6 114 aa13.91□□□□□ -0.18
SOX17-201ENST00000297316 GAGE2AQ6NT46 116 aa13.91□□□□□ -0.18
SOX17-201ENST00000297316 SDIM1Q6ZPB5 146 aa13.91□□□□□ -0.18
SOX17-201ENST00000297316 IMUPQ9GZP8 106 aa13.9□□□□□ -0.18
SOX17-201ENST00000297316 F8WDY8 70 aa13.9□□□□□ -0.18
SOX17-201ENST00000297316 NBDYA0A0U1RRE5 68 aa13.89□□□□□ -0.19
SOX17-201ENST00000297316 C9orf129Q5T035 196 aaKnown RBP13.89□□□□□ -0.19
SOX17-201ENST00000297316 FAM236AA0A1B0GUQ0 79 aa13.87□□□□□ -0.19
SOX17-201ENST00000297316 FAM236BA0A1B0GV22 79 aa13.87□□□□□ -0.19
SOX17-201ENST00000297316 M0R2N4 97 aa13.87□□□□□ -0.19
SOX17-201ENST00000297316 PSCAO43653 123 aa13.87□□□□□ -0.19
SOX17-201ENST00000297316 KMT2AQ03164 3969 aa13.87□□□□□ -0.19
SOX17-201ENST00000297316 Q8N814 137 aa13.86□□□□□ -0.19
SOX17-201ENST00000297316 LINC00167Q96N53 147 aa13.85□□□□□ -0.19
SOX17-201ENST00000297316 C14orf132Q9NPU4 83 aa13.84□□□□□ -0.19
SOX17-201ENST00000297316 TRAV23DV6A0A075B6W5 121 aa13.83□□□□□ -0.2
SOX17-201ENST00000297316 LINC00575Q6W349 94 aa13.82□□□□□ -0.2
SOX17-201ENST00000297316 SERTAD4-AS1Q5TG53 156 aa13.81□□□□□ -0.2
SOX17-201ENST00000297316 OBSCN-AS1Q96MR7 158 aa13.81□□□□□ -0.2
SOX17-201ENST00000297316 A0A1B0GX51 115 aa13.81□□□□□ -0.2
SOX17-201ENST00000297316 M0R378 163 aa13.81□□□□□ -0.2
SOX17-201ENST00000297316 ORMDL1Q9P0S3 153 aa13.81□□□□□ -0.2
SOX17-201ENST00000297316 TLX1NBP0CAT3 122 aa13.8□□□□□ -0.2
SOX17-201ENST00000297316 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.78□□□□□ -0.2
SOX17-201ENST00000297316 ZNF73O43830 326 aaPredicted RBP13.78□□□□□ -0.2
SOX17-201ENST00000297316 Q6ZRN7 208 aaPredicted RBP13.78□□□□□ -0.2
SOX17-201ENST00000297316 DIRC1Q969H9 104 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms