RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 KRTAP7-1Q8IUC3 87 aa17.5■□□□□ 0.39
CHCHD4-201ENST00000295767 APOBP04114 4563 aaKnown RBP17.5■□□□□ 0.39
CHCHD4-201ENST00000295767 CDK2AP2O75956 126 aa17.5■□□□□ 0.39
CHCHD4-201ENST00000295767 SERTAD4-AS1Q5TG53 156 aa17.5■□□□□ 0.39
CHCHD4-201ENST00000295767 SLC25A34Q6PIV7 304 aa17.5■□□□□ 0.39
CHCHD4-201ENST00000295767 NPC2P61916 151 aa17.48■□□□□ 0.39
CHCHD4-201ENST00000295767 EPM2AB3EWF7 344 aa17.47■□□□□ 0.39
CHCHD4-201ENST00000295767 SPANXDQ9BXN6 97 aa17.47■□□□□ 0.39
CHCHD4-201ENST00000295767 SPANXCQ9NY87 97 aa17.47■□□□□ 0.39
CHCHD4-201ENST00000295767 SOSTDC1Q6X4U4 206 aa17.47■□□□□ 0.39
CHCHD4-201ENST00000295767 EIF4EBP3O60516 100 aaPredicted RBP17.46■□□□□ 0.39
CHCHD4-201ENST00000295767 Q8NDZ9 215 aa17.46■□□□□ 0.39
CHCHD4-201ENST00000295767 PLA2G2DQ9UNK4 145 aa17.46■□□□□ 0.39
CHCHD4-201ENST00000295767 LOC107984156A0A0G2JMH3 177 aa17.45■□□□□ 0.38
CHCHD4-201ENST00000295767 ARL17AQ8IVW1 177 aa17.45■□□□□ 0.38
CHCHD4-201ENST00000295767 MIEN1Q9BRT3 115 aa17.44■□□□□ 0.38
CHCHD4-201ENST00000295767 LINC00308Q8TCZ7 52 aa17.43■□□□□ 0.38
CHCHD4-201ENST00000295767 VPREB1P12018 145 aa17.43■□□□□ 0.38
CHCHD4-201ENST00000295767 C12orf57Q99622 126 aa17.43■□□□□ 0.38
CHCHD4-201ENST00000295767 SPANXB1Q9NS25 103 aaPredicted RBP17.42■□□□□ 0.38
CHCHD4-201ENST00000295767 M0QXV9 152 aa17.41■□□□□ 0.38
CHCHD4-201ENST00000295767 C2orf91Q6ZV80 131 aa17.41■□□□□ 0.38
CHCHD4-201ENST00000295767 Q6ZVH6 145 aa17.4■□□□□ 0.38
CHCHD4-201ENST00000295767 IGLV5-37A0A075B6J1 123 aa17.39■□□□□ 0.38
CHCHD4-201ENST00000295767 PHF5AQ7RTV0 110 aaKnown RBP17.39■□□□□ 0.38
CHCHD4-201ENST00000295767 C22orf24Q9Y442 160 aa17.39■□□□□ 0.38
CHCHD4-201ENST00000295767 BIRC6Q9NR09 4857 aa17.39■□□□□ 0.37
CHCHD4-201ENST00000295767 RPL24P83731 157 aaKnown RBP17.39■□□□□ 0.37
CHCHD4-201ENST00000295767 SRSF9Q13242 221 aaKnown RBP eCLIP17.39■□□□□ 0.37
CHCHD4-201ENST00000295767 PRO1933Q9H354 126 aa17.38■□□□□ 0.37
CHCHD4-201ENST00000295767 HIGD1BQ9P298 99 aa17.38■□□□□ 0.37
CHCHD4-201ENST00000295767 NKAPP1Q8N9T2 125 aa17.37■□□□□ 0.37
CHCHD4-201ENST00000295767 KIAA1109Q2LD37 5005 aa17.37■□□□□ 0.37
CHCHD4-201ENST00000295767 IFITM1P13164 125 aa17.36■□□□□ 0.37
CHCHD4-201ENST00000295767 UQCR10Q9UDW1 63 aa17.36■□□□□ 0.37
CHCHD4-201ENST00000295767 PRR3P79522 188 aaKnown RBP17.36■□□□□ 0.37
CHCHD4-201ENST00000295767 SMR3BP02814 79 aaPredicted RBP17.35■□□□□ 0.37
CHCHD4-201ENST00000295767 MUSTN1Q8IVN3 82 aa17.35■□□□□ 0.37
CHCHD4-201ENST00000295767 MRPL55Q7Z7F7 128 aaKnown RBP17.34■□□□□ 0.37
CHCHD4-201ENST00000295767 LINC00518Q8N0U6 118 aa17.34■□□□□ 0.37
CHCHD4-201ENST00000295767 NCR3O14931 201 aa17.32■□□□□ 0.36
CHCHD4-201ENST00000295767 NDUFC2O95298 119 aa17.32■□□□□ 0.36
CHCHD4-201ENST00000295767 COPS9Q8WXC6 57 aa17.32■□□□□ 0.36
CHCHD4-201ENST00000295767 HIST1H4GQ99525 98 aa17.32■□□□□ 0.36
CHCHD4-201ENST00000295767 HSPG2P98160 4391 aa17.32■□□□□ 0.36
CHCHD4-201ENST00000295767 RYR1P21817 5038 aa17.32■□□□□ 0.36
CHCHD4-201ENST00000295767 PPDPFQ9H3Y8 114 aa17.32■□□□□ 0.36
CHCHD4-201ENST00000295767 C7orf33Q8WU49 177 aa17.31■□□□□ 0.36
CHCHD4-201ENST00000295767 GAGE10A6NGK3 116 aa17.3■□□□□ 0.36
CHCHD4-201ENST00000295767 LBHQ53QV2 105 aaPredicted RBP17.29■□□□□ 0.36
CHCHD4-201ENST00000295767 LINC00167Q96N53 147 aa17.29■□□□□ 0.36
CHCHD4-201ENST00000295767 M0R378 163 aa17.28■□□□□ 0.36
CHCHD4-201ENST00000295767 LINC00528Q8N1L1 170 aa17.28■□□□□ 0.36
CHCHD4-201ENST00000295767 KRTAP11-1Q8IUC1 163 aa17.27■□□□□ 0.36
CHCHD4-201ENST00000295767 UBE2BP63146 152 aa17.26■□□□□ 0.35
CHCHD4-201ENST00000295767 TRBV10-2A0A0K0K1G8 114 aa17.25■□□□□ 0.35
CHCHD4-201ENST00000295767 RPL37AP8A6NKH3 93 aa17.25■□□□□ 0.35
CHCHD4-201ENST00000295767 IGKV2-28A0A075B6P5 120 aa17.24■□□□□ 0.35
CHCHD4-201ENST00000295767 IGKV2D-28P01615 120 aa17.24■□□□□ 0.35
CHCHD4-201ENST00000295767 HNRNPA3P51991 378 aaKnown RBP17.24■□□□□ 0.35
CHCHD4-201ENST00000295767 TAL2Q16559 108 aa17.23■□□□□ 0.35
CHCHD4-201ENST00000295767 TSTD3H0UI37 97 aa17.21■□□□□ 0.35
CHCHD4-201ENST00000295767 KRTAP17-1Q9BYP8 105 aa17.21■□□□□ 0.35
CHCHD4-201ENST00000295767 A4D1N5 150 aa17.21■□□□□ 0.35
CHCHD4-201ENST00000295767 IGLV1-50A0A075B6I6 118 aa17.2■□□□□ 0.34
CHCHD4-201ENST00000295767 TRBV10-3A0A0K0K1G6 114 aa17.18■□□□□ 0.34
CHCHD4-201ENST00000295767 HSD52Q0P140 79 aa17.18■□□□□ 0.34
CHCHD4-201ENST00000295767 CEND1Q8N111 149 aa17.18■□□□□ 0.34
CHCHD4-201ENST00000295767 PSORS1C2Q9UIG4 136 aa17.18■□□□□ 0.34
CHCHD4-201ENST00000295767 LINC00337Q8N6G1 96 aa17.18■□□□□ 0.34
CHCHD4-201ENST00000295767 DDTP30046 118 aa17.16■□□□□ 0.34
CHCHD4-201ENST00000295767 RPL37AP61513 92 aaKnown RBP17.16■□□□□ 0.34
CHCHD4-201ENST00000295767 S100A7L2Q5SY68 101 aa17.16■□□□□ 0.34
CHCHD4-201ENST00000295767 Q8N1X5 172 aa17.15■□□□□ 0.34
CHCHD4-201ENST00000295767 FAM229AH3BQW9 127 aa17.14■□□□□ 0.33
CHCHD4-201ENST00000295767 IGLV6-57P01721 117 aa17.14■□□□□ 0.33
CHCHD4-201ENST00000295767 Q5VSD8 79 aa17.14■□□□□ 0.33
CHCHD4-201ENST00000295767 OR13C6PQ8NH95 151 aa17.14■□□□□ 0.33
CHCHD4-201ENST00000295767 FAT1Q14517 4588 aa17.13■□□□□ 0.33
CHCHD4-201ENST00000295767 FXYD2P54710 66 aa17.11■□□□□ 0.33
CHCHD4-201ENST00000295767 KRTAP10-4P60372 401 aaPredicted RBP17.1■□□□□ 0.33
CHCHD4-201ENST00000295767 C1orf137Q5JT78 98 aa17.1■□□□□ 0.33
CHCHD4-201ENST00000295767 TMEM126AQ9H061 195 aa17.1■□□□□ 0.33
CHCHD4-201ENST00000295767 KCNQ1DNQ9H478 68 aa17.09■□□□□ 0.33
CHCHD4-201ENST00000295767 VPS13BQ7Z7G8 4022 aa17.09■□□□□ 0.33
CHCHD4-201ENST00000295767 A6NDN8 102 aa17.08■□□□□ 0.32
CHCHD4-201ENST00000295767 PRYO14603 147 aa17.08■□□□□ 0.32
CHCHD4-201ENST00000295767 CTAG1AP78358 180 aa17.08■□□□□ 0.32
CHCHD4-201ENST00000295767 REG3GQ6UW15 175 aa17.08■□□□□ 0.32
CHCHD4-201ENST00000295767 PLA2G1BP04054 148 aaKnown RBP17.07■□□□□ 0.32
CHCHD4-201ENST00000295767 TRAV13-2A0A0B4J235 113 aa17.07■□□□□ 0.32
CHCHD4-201ENST00000295767 TMEM238LA0A1B0GVL6 79 aa17.06■□□□□ 0.32
CHCHD4-201ENST00000295767 A6NJY4 79 aa17.06■□□□□ 0.32
CHCHD4-201ENST00000295767 CFC1BP0CG36 223 aa17.06■□□□□ 0.32
CHCHD4-201ENST00000295767 CFC1P0CG37 223 aa17.06■□□□□ 0.32
CHCHD4-201ENST00000295767 TRAV23DV6A0A075B6W5 121 aa17.04■□□□□ 0.32
CHCHD4-201ENST00000295767 BCE1O60756 84 aa17.03■□□□□ 0.32
CHCHD4-201ENST00000295767 A0A0B4J2C4 111 aa17.02■□□□□ 0.31
CHCHD4-201ENST00000295767 SPRR1AP35321 89 aa17.01■□□□□ 0.31
CHCHD4-201ENST00000295767 HERC2O95714 4834 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms