RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 HIGD2BQ4VC39 106 aa10.69□□□□□ -0.7
NCKIPSD-201ENST00000294129 LINC01561Q8N1V8 128 aa10.69□□□□□ -0.7
NCKIPSD-201ENST00000294129 S100A7L2Q5SY68 101 aa10.68□□□□□ -0.7
NCKIPSD-201ENST00000294129 NANOS2P60321 138 aaKnown RBP10.68□□□□□ -0.7
NCKIPSD-201ENST00000294129 XAGE1AQ9HD64 81 aa10.68□□□□□ -0.7
NCKIPSD-201ENST00000294129 NBEAL1Q6ZS30 2694 aa10.67□□□□□ -0.7
NCKIPSD-201ENST00000294129 PRB2P02812 416 aaPredicted RBP10.67□□□□□ -0.7
NCKIPSD-201ENST00000294129 COX17Q14061 63 aa10.67□□□□□ -0.7
NCKIPSD-201ENST00000294129 IMUPQ9GZP8 106 aa10.67□□□□□ -0.7
NCKIPSD-201ENST00000294129 WIPF1O43516 503 aa10.66□□□□□ -0.7
NCKIPSD-201ENST00000294129 C6orf99Q4VX62 202 aa10.66□□□□□ -0.7
NCKIPSD-201ENST00000294129 INAFM2P0DMQ5 153 aa10.66□□□□□ -0.7
NCKIPSD-201ENST00000294129 A0A0J9YWU9 116 aa10.65□□□□□ -0.7
NCKIPSD-201ENST00000294129 RPL18AQ02543 176 aaKnown RBP10.65□□□□□ -0.7
NCKIPSD-201ENST00000294129 TMEM126AQ9H061 195 aa10.65□□□□□ -0.7
NCKIPSD-201ENST00000294129 PRR34Q9NV39 138 aa10.65□□□□□ -0.7
NCKIPSD-201ENST00000294129 KLK5Q9Y337 293 aaPredicted RBP10.65□□□□□ -0.71
NCKIPSD-201ENST00000294129 ORMDL1Q9P0S3 153 aa10.64□□□□□ -0.71
NCKIPSD-201ENST00000294129 SDIM1Q6ZPB5 146 aa10.62□□□□□ -0.71
NCKIPSD-201ENST00000294129 NDUFC2O95298 119 aa10.62□□□□□ -0.71
NCKIPSD-201ENST00000294129 C6orf48Q9UBA6 75 aa10.62□□□□□ -0.71
NCKIPSD-201ENST00000294129 ESRGQ1W209 222 aa10.61□□□□□ -0.71
NCKIPSD-201ENST00000294129 ZNF561-AS1K7EIQ3 104 aa10.61□□□□□ -0.71
NCKIPSD-201ENST00000294129 Q8N814 137 aa10.6□□□□□ -0.71
NCKIPSD-201ENST00000294129 MGAM2Q2M2H8 2515 aa10.6□□□□□ -0.71
NCKIPSD-201ENST00000294129 C9orf153Q5TBE3 101 aa10.6□□□□□ -0.71
NCKIPSD-201ENST00000294129 CAMK2N2Q96S95 79 aa10.59□□□□□ -0.71
NCKIPSD-201ENST00000294129 DEFB131BA0A096LNP1 70 aa10.59□□□□□ -0.71
NCKIPSD-201ENST00000294129 CMYA5Q8N3K9 4069 aa10.59□□□□□ -0.71
NCKIPSD-201ENST00000294129 C3orf22Q8N5N4 141 aa10.58□□□□□ -0.72
NCKIPSD-201ENST00000294129 C11orf45Q8TAV5 145 aa10.58□□□□□ -0.72
NCKIPSD-201ENST00000294129 IGKV2D-24A0A075B6R9 120 aa10.57□□□□□ -0.72
NCKIPSD-201ENST00000294129 IGKV3D-7A0A0C4DH55 119 aa10.57□□□□□ -0.72
NCKIPSD-201ENST00000294129 MRAPQ8TCY5 172 aa10.57□□□□□ -0.72
NCKIPSD-201ENST00000294129 LINC00846Q9NV44 126 aa10.56□□□□□ -0.72
NCKIPSD-201ENST00000294129 TRBV10-3A0A0K0K1G6 114 aa10.55□□□□□ -0.72
NCKIPSD-201ENST00000294129 UQCRQO14949 82 aa10.55□□□□□ -0.72
NCKIPSD-201ENST00000294129 EGFEM1PQ0D2K5 195 aa10.54□□□□□ -0.72
NCKIPSD-201ENST00000294129 Q6ZRU5 148 aa10.54□□□□□ -0.72
NCKIPSD-201ENST00000294129 C1orf43Q9BWL3 253 aa10.54□□□□□ -0.72
NCKIPSD-201ENST00000294129 A0A087WVE0 104 aa10.52□□□□□ -0.73
NCKIPSD-201ENST00000294129 LINC00575Q6W349 94 aa10.52□□□□□ -0.73
NCKIPSD-201ENST00000294129 TMEM256-PLSCR3K7ERE1 68 aa10.51□□□□□ -0.73
NCKIPSD-201ENST00000294129 C15orf56Q8N910 161 aa10.51□□□□□ -0.73
NCKIPSD-201ENST00000294129 OBSCN-AS1Q96MR7 158 aa10.51□□□□□ -0.73
NCKIPSD-201ENST00000294129 BAHCC1Q9P281 2608 aa10.51□□□□□ -0.73
NCKIPSD-201ENST00000294129 hADV29S1A0JD25 119 aa10.51□□□□□ -0.73
NCKIPSD-201ENST00000294129 H3BNG1 76 aa10.5□□□□□ -0.73
NCKIPSD-201ENST00000294129 COX7CP15954 63 aa10.5□□□□□ -0.73
NCKIPSD-201ENST00000294129 KRTAP26-1Q6PEX3 210 aa10.5□□□□□ -0.73
NCKIPSD-201ENST00000294129 IGLV6-57P01721 117 aa10.5□□□□□ -0.73
NCKIPSD-201ENST00000294129 LAMTOR3Q9UHA4 124 aa10.5□□□□□ -0.73
NCKIPSD-201ENST00000294129 TRAV23DV6A0A075B6W5 121 aa10.5□□□□□ -0.73
NCKIPSD-201ENST00000294129 Q6ZQY7 126 aa10.49□□□□□ -0.73
NCKIPSD-201ENST00000294129 C2orf48Q96LS8 159 aa10.49□□□□□ -0.73
NCKIPSD-201ENST00000294129 GVQW2A0A096LPI5 108 aaPredicted RBP10.49□□□□□ -0.73
NCKIPSD-201ENST00000294129 LINC00167Q96N53 147 aa10.49□□□□□ -0.73
NCKIPSD-201ENST00000294129 A0A1B0GX51 115 aa10.47□□□□□ -0.73
NCKIPSD-201ENST00000294129 ATOX1O00244 68 aa10.47□□□□□ -0.73
NCKIPSD-201ENST00000294129 HIST1H4AP62805 103 aaKnown RBP10.47□□□□□ -0.73
NCKIPSD-201ENST00000294129 DIRC1Q969H9 104 aa10.47□□□□□ -0.73
NCKIPSD-201ENST00000294129 JMJD7-PLA2G4BH0Y9G9 81 aa10.46□□□□□ -0.74
NCKIPSD-201ENST00000294129 CCKP06307 115 aa10.46□□□□□ -0.74
NCKIPSD-201ENST00000294129 LINC01556Q5JQF7 62 aa10.45□□□□□ -0.74
NCKIPSD-201ENST00000294129 Q6JHZ5 121 aa10.45□□□□□ -0.74
NCKIPSD-201ENST00000294129 CYSTM1Q9H1C7 97 aa10.45□□□□□ -0.74
NCKIPSD-201ENST00000294129 STAB2Q8WWQ8 2551 aa10.45□□□□□ -0.74
NCKIPSD-201ENST00000294129 LOC107984640A0A0U1RRK4 108 aa10.45□□□□□ -0.74
NCKIPSD-201ENST00000294129 ZNF73O43830 326 aaPredicted RBP10.45□□□□□ -0.74
NCKIPSD-201ENST00000294129 MUC7Q8TAX7 377 aa10.45□□□□□ -0.74
NCKIPSD-201ENST00000294129 Q6ZRP5 223 aa10.44□□□□□ -0.74
NCKIPSD-201ENST00000294129 VPREB1P12018 145 aa10.44□□□□□ -0.74
NCKIPSD-201ENST00000294129 NDUFC2-KCTD14E9PQ53 114 aa10.44□□□□□ -0.74
NCKIPSD-201ENST00000294129 COX7BP24311 80 aa10.42□□□□□ -0.74
NCKIPSD-201ENST00000294129 RBM3P98179 157 aaKnown RBP10.42□□□□□ -0.74
NCKIPSD-201ENST00000294129 SYCNQ0VAF6 134 aa10.42□□□□□ -0.74
NCKIPSD-201ENST00000294129 CASC10Q5T4H9 136 aa10.42□□□□□ -0.74
NCKIPSD-201ENST00000294129 CRYGAP11844 174 aa10.41□□□□□ -0.74
NCKIPSD-201ENST00000294129 USP17L23D6RBM5 183 aa10.41□□□□□ -0.74
NCKIPSD-201ENST00000294129 M0R2N4 97 aa10.41□□□□□ -0.74
NCKIPSD-201ENST00000294129 LINC00588Q9Y4M8 146 aa10.41□□□□□ -0.74
NCKIPSD-201ENST00000294129 DNAH3Q8TD57 4116 aa10.4□□□□□ -0.75
NCKIPSD-201ENST00000294129 TRAV10A0A0B4J240 114 aa10.38□□□□□ -0.75
NCKIPSD-201ENST00000294129 M0R378 163 aa10.38□□□□□ -0.75
NCKIPSD-201ENST00000294129 SERP2Q8N6R1 65 aa10.38□□□□□ -0.75
NCKIPSD-201ENST00000294129 K7EIL1 84 aa10.37□□□□□ -0.75
NCKIPSD-201ENST00000294129 DNAH10OSP0CZ25 163 aa10.37□□□□□ -0.75
NCKIPSD-201ENST00000294129 DSCR8Q96T75 97 aa10.37□□□□□ -0.75
NCKIPSD-201ENST00000294129 SERTAD4-AS1Q5TG53 156 aa10.36□□□□□ -0.75
NCKIPSD-201ENST00000294129 NKAPP1Q8N9T2 125 aa10.36□□□□□ -0.75
NCKIPSD-201ENST00000294129 ELOF1P60002 83 aaKnown RBP10.35□□□□□ -0.75
NCKIPSD-201ENST00000294129 FAM19A1Q7Z5A9 133 aa10.35□□□□□ -0.75
NCKIPSD-201ENST00000294129 Q6ZQT0 140 aa10.35□□□□□ -0.75
NCKIPSD-201ENST00000294129 UBL5Q9BZL1 73 aa10.35□□□□□ -0.75
NCKIPSD-201ENST00000294129 TENM2Q9NT68 2774 aa10.35□□□□□ -0.75
NCKIPSD-201ENST00000294129 RPL37AP8A6NKH3 93 aa10.34□□□□□ -0.75
NCKIPSD-201ENST00000294129 LYSTQ99698 3801 aa10.34□□□□□ -0.75
NCKIPSD-201ENST00000294129 HUWE1Q7Z6Z7 4374 aaKnown RBP10.34□□□□□ -0.75
NCKIPSD-201ENST00000294129 FAM168BA1KXE4 195 aa10.34□□□□□ -0.75
NCKIPSD-201ENST00000294129 DEFB105AQ8NG35 78 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms