RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 Q6ZSA8 131 aa13.84□□□□□ -0.19
PDLIM3-203ENST00000284771 KRTAP7-1Q8IUC3 87 aa13.84□□□□□ -0.19
PDLIM3-203ENST00000284771 Q8NDZ9 215 aa13.84□□□□□ -0.19
PDLIM3-203ENST00000284771 MIEN1Q9BRT3 115 aa13.84□□□□□ -0.19
PDLIM3-203ENST00000284771 SPANXB1Q9NS25 103 aaPredicted RBP13.84□□□□□ -0.19
PDLIM3-203ENST00000284771 PKIGQ9Y2B9 76 aa13.83□□□□□ -0.2
PDLIM3-203ENST00000284771 LOC107984156A0A0G2JMH3 177 aa13.82□□□□□ -0.2
PDLIM3-203ENST00000284771 A0A1W2PNN7 141 aa13.82□□□□□ -0.2
PDLIM3-203ENST00000284771 ARL17AQ8IVW1 177 aa13.82□□□□□ -0.2
PDLIM3-203ENST00000284771 LINC00308Q8TCZ7 52 aa13.82□□□□□ -0.2
PDLIM3-203ENST00000284771 SRSF9Q13242 221 aaKnown RBP eCLIP13.81□□□□□ -0.2
PDLIM3-203ENST00000284771 MUSTN1Q8IVN3 82 aa13.8□□□□□ -0.2
PDLIM3-203ENST00000284771 LINC00474Q9P2X8 69 aa13.8□□□□□ -0.2
PDLIM3-203ENST00000284771 SERTAD4-AS1Q5TG53 156 aa13.79□□□□□ -0.2
PDLIM3-203ENST00000284771 Q6ZVH6 145 aa13.79□□□□□ -0.2
PDLIM3-203ENST00000284771 A0A087WYN8 130 aa13.79□□□□□ -0.2
PDLIM3-203ENST00000284771 TSTD3H0UI37 97 aa13.78□□□□□ -0.2
PDLIM3-203ENST00000284771 DPH3Q96FX2 82 aa13.78□□□□□ -0.2
PDLIM3-203ENST00000284771 HIST1H4GQ99525 98 aa13.77□□□□□ -0.21
PDLIM3-203ENST00000284771 PRR3P79522 188 aaKnown RBP13.76□□□□□ -0.21
PDLIM3-203ENST00000284771 HAMPP81172 84 aa13.76□□□□□ -0.21
PDLIM3-203ENST00000284771 APOBP04114 4563 aaKnown RBP13.76□□□□□ -0.21
PDLIM3-203ENST00000284771 HNRNPA3P51991 378 aaKnown RBP13.75□□□□□ -0.21
PDLIM3-203ENST00000284771 EPM2AB3EWF7 344 aa13.75□□□□□ -0.21
PDLIM3-203ENST00000284771 VPREB1P12018 145 aa13.75□□□□□ -0.21
PDLIM3-203ENST00000284771 IFITM1P13164 125 aa13.75□□□□□ -0.21
PDLIM3-203ENST00000284771 CIRBP-AS1Q8TBR5 109 aa13.75□□□□□ -0.21
PDLIM3-203ENST00000284771 PLA2G2DQ9UNK4 145 aa13.75□□□□□ -0.21
PDLIM3-203ENST00000284771 SCXQ7RTU7 201 aa13.74□□□□□ -0.21
PDLIM3-203ENST00000284771 FAM19A5Q7Z5A7 132 aaPredicted RBP13.74□□□□□ -0.21
PDLIM3-203ENST00000284771 PLAC8Q9NZF1 115 aa13.72□□□□□ -0.21
PDLIM3-203ENST00000284771 XGP55808 180 aa13.72□□□□□ -0.21
PDLIM3-203ENST00000284771 PPDPFQ9H3Y8 114 aa13.72□□□□□ -0.21
PDLIM3-203ENST00000284771 TAL2Q16559 108 aa13.71□□□□□ -0.21
PDLIM3-203ENST00000284771 C22orf24Q9Y442 160 aa13.7□□□□□ -0.22
PDLIM3-203ENST00000284771 CEND1Q8N111 149 aa13.69□□□□□ -0.22
PDLIM3-203ENST00000284771 IGLV5-37A0A075B6J1 123 aa13.69□□□□□ -0.22
PDLIM3-203ENST00000284771 IGKV2-28A0A075B6P5 120 aa13.69□□□□□ -0.22
PDLIM3-203ENST00000284771 A4D1N5 150 aa13.69□□□□□ -0.22
PDLIM3-203ENST00000284771 NDUFC2O95298 119 aa13.69□□□□□ -0.22
PDLIM3-203ENST00000284771 IGKV2D-28P01615 120 aa13.69□□□□□ -0.22
PDLIM3-203ENST00000284771 CTAG1AP78358 180 aa13.69□□□□□ -0.22
PDLIM3-203ENST00000284771 RPL24P83731 157 aaKnown RBP13.69□□□□□ -0.22
PDLIM3-203ENST00000284771 HSD52Q0P140 79 aa13.68□□□□□ -0.22
PDLIM3-203ENST00000284771 DDTP30046 118 aa13.67□□□□□ -0.22
PDLIM3-203ENST00000284771 PHF5AQ7RTV0 110 aaKnown RBP13.67□□□□□ -0.22
PDLIM3-203ENST00000284771 COPS9Q8WXC6 57 aa13.67□□□□□ -0.22
PDLIM3-203ENST00000284771 M0QXV9 152 aa13.66□□□□□ -0.22
PDLIM3-203ENST00000284771 NCR3O14931 201 aa13.66□□□□□ -0.22
PDLIM3-203ENST00000284771 FXYD2P54710 66 aa13.66□□□□□ -0.22
PDLIM3-203ENST00000284771 C7orf33Q8WU49 177 aa13.65□□□□□ -0.22
PDLIM3-203ENST00000284771 MRPL55Q7Z7F7 128 aaKnown RBP13.64□□□□□ -0.23
PDLIM3-203ENST00000284771 NKAPP1Q8N9T2 125 aa13.64□□□□□ -0.23
PDLIM3-203ENST00000284771 KIAA1109Q2LD37 5005 aa13.64□□□□□ -0.23
PDLIM3-203ENST00000284771 GAGE10A6NGK3 116 aa13.63□□□□□ -0.23
PDLIM3-203ENST00000284771 KRTAP11-1Q8IUC1 163 aa13.63□□□□□ -0.23
PDLIM3-203ENST00000284771 LINC00337Q8N6G1 96 aa13.63□□□□□ -0.23
PDLIM3-203ENST00000284771 LINC00167Q96N53 147 aa13.63□□□□□ -0.23
PDLIM3-203ENST00000284771 TRBV10-2A0A0K0K1G8 114 aa13.61□□□□□ -0.23
PDLIM3-203ENST00000284771 M0R378 163 aa13.61□□□□□ -0.23
PDLIM3-203ENST00000284771 RPL37AP8A6NKH3 93 aa13.59□□□□□ -0.23
PDLIM3-203ENST00000284771 CFC1BP0CG36 223 aa13.59□□□□□ -0.23
PDLIM3-203ENST00000284771 CFC1P0CG37 223 aa13.59□□□□□ -0.23
PDLIM3-203ENST00000284771 HINT1P49773 126 aaPredicted RBP13.59□□□□□ -0.23
PDLIM3-203ENST00000284771 BVES-AS1Q5T3Y7 98 aa13.59□□□□□ -0.23
PDLIM3-203ENST00000284771 CDK2AP2O75956 126 aa13.58□□□□□ -0.24
PDLIM3-203ENST00000284771 RYR1P21817 5038 aa13.58□□□□□ -0.24
PDLIM3-203ENST00000284771 HSPG2P98160 4391 aa13.58□□□□□ -0.24
PDLIM3-203ENST00000284771 IGLV1-50A0A075B6I6 118 aa13.57□□□□□ -0.24
PDLIM3-203ENST00000284771 TRBV10-3A0A0K0K1G6 114 aa13.57□□□□□ -0.24
PDLIM3-203ENST00000284771 PCP4L1A6NKN8 68 aa13.57□□□□□ -0.24
PDLIM3-203ENST00000284771 FAT1Q14517 4588 aa13.57□□□□□ -0.24
PDLIM3-203ENST00000284771 IGLV6-57P01721 117 aa13.56□□□□□ -0.24
PDLIM3-203ENST00000284771 LBHQ53QV2 105 aaPredicted RBP13.56□□□□□ -0.24
PDLIM3-203ENST00000284771 SMR3BP02814 79 aaPredicted RBP13.55□□□□□ -0.24
PDLIM3-203ENST00000284771 OR13C6PQ8NH95 151 aa13.54□□□□□ -0.24
PDLIM3-203ENST00000284771 S100A7L2Q5SY68 101 aa13.53□□□□□ -0.24
PDLIM3-203ENST00000284771 NHP2Q9NX24 153 aaKnown RBP13.53□□□□□ -0.24
PDLIM3-203ENST00000284771 BIRC6Q9NR09 4857 aa13.53□□□□□ -0.24
PDLIM3-203ENST00000284771 TMEM238LA0A1B0GVL6 79 aa13.53□□□□□ -0.24
PDLIM3-203ENST00000284771 A6NDN8 102 aa13.53□□□□□ -0.24
PDLIM3-203ENST00000284771 A6NJY4 79 aa13.53□□□□□ -0.24
PDLIM3-203ENST00000284771 UBE2BP63146 152 aa13.53□□□□□ -0.24
PDLIM3-203ENST00000284771 TMEM126AQ9H061 195 aa13.52□□□□□ -0.25
PDLIM3-203ENST00000284771 A0A0B4J2C4 111 aa13.51□□□□□ -0.25
PDLIM3-203ENST00000284771 A0A1B0GWB2 263 aa13.51□□□□□ -0.25
PDLIM3-203ENST00000284771 TRAV13-2A0A0B4J235 113 aa13.5□□□□□ -0.25
PDLIM3-203ENST00000284771 K7ERJ3 54 aa13.5□□□□□ -0.25
PDLIM3-203ENST00000284771 M0R143 59 aa13.5□□□□□ -0.25
PDLIM3-203ENST00000284771 KRTAP17-1Q9BYP8 105 aa13.5□□□□□ -0.25
PDLIM3-203ENST00000284771 KCNQ1DNQ9H478 68 aa13.5□□□□□ -0.25
PDLIM3-203ENST00000284771 VPS13BQ7Z7G8 4022 aa13.49□□□□□ -0.25
PDLIM3-203ENST00000284771 PSORS1C2Q9UIG4 136 aa13.49□□□□□ -0.25
PDLIM3-203ENST00000284771 RAB37Q96AX2 223 aa13.48□□□□□ -0.25
PDLIM3-203ENST00000284771 RPL13AP40429 203 aaKnown RBP13.47□□□□□ -0.25
PDLIM3-203ENST00000284771 BATFQ16520 125 aa13.47□□□□□ -0.25
PDLIM3-203ENST00000284771 PRO1854Q9UHT4 67 aa13.47□□□□□ -0.25
PDLIM3-203ENST00000284771 LINC00528Q8N1L1 170 aa13.46□□□□□ -0.26
PDLIM3-203ENST00000284771 SNHG12Q9BXW3 62 aa13.45□□□□□ -0.26
PDLIM3-203ENST00000284771 TRAV23DV6A0A075B6W5 121 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms