RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 H0Y9P7 68 aa11.48□□□□□ -0.57
SH3RF1-201ENST00000284637 CIRBP-AS1Q8TBR5 109 aa11.48□□□□□ -0.57
SH3RF1-201ENST00000284637 LITAFQ99732 161 aa11.47□□□□□ -0.57
SH3RF1-201ENST00000284637 C2orf48Q96LS8 159 aa11.47□□□□□ -0.57
SH3RF1-201ENST00000284637 LY6G6CO95867 125 aa11.47□□□□□ -0.57
SH3RF1-201ENST00000284637 WIPF1O43516 503 aa11.46□□□□□ -0.57
SH3RF1-201ENST00000284637 LINC01561Q8N1V8 128 aa11.46□□□□□ -0.57
SH3RF1-201ENST00000284637 F8P00451 2351 aa11.46□□□□□ -0.57
SH3RF1-201ENST00000284637 HCG22E2RYF7 251 aa11.45□□□□□ -0.58
SH3RF1-201ENST00000284637 ACANP16112 2415 aa11.45□□□□□ -0.58
SH3RF1-201ENST00000284637 PRLHP81277 87 aa11.45□□□□□ -0.58
SH3RF1-201ENST00000284637 RETNLBQ9BQ08 111 aa11.45□□□□□ -0.58
SH3RF1-201ENST00000284637 TM2D3Q9BRN9 247 aa11.45□□□□□ -0.58
SH3RF1-201ENST00000284637 SMIM29Q86T20 159 aa11.44□□□□□ -0.58
SH3RF1-201ENST00000284637 Q6ZQT0 140 aa11.43□□□□□ -0.58
SH3RF1-201ENST00000284637 C16orf95Q9H693 158 aa11.43□□□□□ -0.58
SH3RF1-201ENST00000284637 LOC110117498A0A087WWA1 95 aa11.42□□□□□ -0.58
SH3RF1-201ENST00000284637 KIAA0087Q14695 138 aa11.41□□□□□ -0.58
SH3RF1-201ENST00000284637 LINC01556Q5JQF7 62 aa11.4□□□□□ -0.58
SH3RF1-201ENST00000284637 KLKP1Q107X0 134 aa11.39□□□□□ -0.59
SH3RF1-201ENST00000284637 C22orf24Q9Y442 160 aa11.38□□□□□ -0.59
SH3RF1-201ENST00000284637 ERC2-IT1O76042 136 aa11.37□□□□□ -0.59
SH3RF1-201ENST00000284637 SPINK1P00995 79 aa11.37□□□□□ -0.59
SH3RF1-201ENST00000284637 FASNP49327 2511 aaKnown RBP11.37□□□□□ -0.59
SH3RF1-201ENST00000284637 CD164Q04900 197 aa11.36□□□□□ -0.59
SH3RF1-201ENST00000284637 C1orf64Q8NEQ6 169 aa11.36□□□□□ -0.59
SH3RF1-201ENST00000284637 C6orf48Q9UBA6 75 aa11.35□□□□□ -0.59
SH3RF1-201ENST00000284637 SERTAD4-AS1Q5TG53 156 aa11.34□□□□□ -0.59
SH3RF1-201ENST00000284637 A0A1B0GW54 56 aa11.33□□□□□ -0.6
SH3RF1-201ENST00000284637 H7BZZ5 65 aa11.33□□□□□ -0.6
SH3RF1-201ENST00000284637 ANKRD17O75179 2603 aaKnown RBP11.31□□□□□ -0.6
SH3RF1-201ENST00000284637 IGLV5-52A0A0A0MRZ9 124 aa11.31□□□□□ -0.6
SH3RF1-201ENST00000284637 LINC00167Q96N53 147 aa11.3□□□□□ -0.6
SH3RF1-201ENST00000284637 NUPR2A6NF83 97 aa11.3□□□□□ -0.6
SH3RF1-201ENST00000284637 X6R8D5 127 aa11.29□□□□□ -0.6
SH3RF1-201ENST00000284637 A8MUN3 132 aa11.27□□□□□ -0.61
SH3RF1-201ENST00000284637 H3BPC8 53 aa11.26□□□□□ -0.61
SH3RF1-201ENST00000284637 ELOF1P60002 83 aaKnown RBP11.26□□□□□ -0.61
SH3RF1-201ENST00000284637 VPREB1P12018 145 aa11.26□□□□□ -0.61
SH3RF1-201ENST00000284637 EIF4EBP3O60516 100 aaPredicted RBP11.25□□□□□ -0.61
SH3RF1-201ENST00000284637 LINC01600Q96MT4 127 aa11.24□□□□□ -0.61
SH3RF1-201ENST00000284637 DNAH12Q6ZR08 3092 aa11.24□□□□□ -0.61
SH3RF1-201ENST00000284637 CYP4F30PQ9H0H9 118 aa11.24□□□□□ -0.61
SH3RF1-201ENST00000284637 SPAG11AQ6PDA7 123 aa11.22□□□□□ -0.61
SH3RF1-201ENST00000284637 IGKV2D-30A0A075B6S6 120 aa11.2□□□□□ -0.62
SH3RF1-201ENST00000284637 IGKV2-30P06310 120 aa11.2□□□□□ -0.62
SH3RF1-201ENST00000284637 Q8NBF4 154 aa11.2□□□□□ -0.62
SH3RF1-201ENST00000284637 COL27A1Q8IZC6 1860 aaPredicted RBP11.19□□□□□ -0.62
SH3RF1-201ENST00000284637 ST20-AS1Q8NBB2 130 aa11.18□□□□□ -0.62
SH3RF1-201ENST00000284637 LINC00476Q8WZB0 136 aa11.18□□□□□ -0.62
SH3RF1-201ENST00000284637 C8orf87E5RJ46 101 aa11.17□□□□□ -0.62
SH3RF1-201ENST00000284637 Q6ZRX8 168 aa11.17□□□□□ -0.62
SH3RF1-201ENST00000284637 CEP350Q5VT06 3117 aa11.17□□□□□ -0.62
SH3RF1-201ENST00000284637 USP24Q9UPU5 2620 aa11.16□□□□□ -0.62
SH3RF1-201ENST00000284637 TP53AIP1Q9HCN2 124 aa11.16□□□□□ -0.62
SH3RF1-201ENST00000284637 A0A1B0GU69 56 aa11.15□□□□□ -0.62
SH3RF1-201ENST00000284637 MOBPQ13875 183 aa11.15□□□□□ -0.62
SH3RF1-201ENST00000284637 C1orf134Q5TEV5 83 aa11.15□□□□□ -0.62
SH3RF1-201ENST00000284637 KTN1-AS1Q86SY8 53 aa11.15□□□□□ -0.62
SH3RF1-201ENST00000284637 ATP11AUNQ6ZP68 121 aa11.14□□□□□ -0.63
SH3RF1-201ENST00000284637 TRAV22A0A0B4J277 110 aa11.14□□□□□ -0.63
SH3RF1-201ENST00000284637 FSHBP01225 129 aa11.13□□□□□ -0.63
SH3RF1-201ENST00000284637 RPL37AP61513 92 aaKnown RBP11.13□□□□□ -0.63
SH3RF1-201ENST00000284637 EPG5Q9HCE0 2579 aa11.13□□□□□ -0.63
SH3RF1-201ENST00000284637 KLK9Q2XQG4 91 aa11.12□□□□□ -0.63
SH3RF1-201ENST00000284637 PHF5AQ7RTV0 110 aaKnown RBP11.11□□□□□ -0.63
SH3RF1-201ENST00000284637 PRR15Q8IV56 129 aa11.09□□□□□ -0.63
SH3RF1-201ENST00000284637 Q6ZRP5 223 aa11.08□□□□□ -0.63
SH3RF1-201ENST00000284637 ACYP2P14621 99 aa11.08□□□□□ -0.64
SH3RF1-201ENST00000284637 C7orf65Q6ZTY9 151 aa11.08□□□□□ -0.64
SH3RF1-201ENST00000284637 IGLV6-57P01721 117 aa11.08□□□□□ -0.64
SH3RF1-201ENST00000284637 SPACA4Q8TDM5 124 aa11.07□□□□□ -0.64
SH3RF1-201ENST00000284637 TRBV7-4A0A0J9YYF1 115 aa11.07□□□□□ -0.64
SH3RF1-201ENST00000284637 C9orf129Q5T035 196 aaKnown RBP11.07□□□□□ -0.64
SH3RF1-201ENST00000284637 LOC101927531A0A1B0GV80 90 aa11.07□□□□□ -0.64
SH3RF1-201ENST00000284637 EPM2AB3EWF7 344 aa11.07□□□□□ -0.64
SH3RF1-201ENST00000284637 H3BNG1 76 aa11.07□□□□□ -0.64
SH3RF1-201ENST00000284637 Q8NAQ8 132 aa11.07□□□□□ -0.64
SH3RF1-201ENST00000284637 MDFIQ99750 246 aa11.06□□□□□ -0.64
SH3RF1-201ENST00000284637 Q5XG85 94 aa11.06□□□□□ -0.64
SH3RF1-201ENST00000284637 COA5Q86WW8 74 aa11.04□□□□□ -0.64
SH3RF1-201ENST00000284637 BPTFQ12830 3046 aa11.04□□□□□ -0.64
SH3RF1-201ENST00000284637 GVQW2A0A096LPI5 108 aaPredicted RBP11.03□□□□□ -0.64
SH3RF1-201ENST00000284637 K7EQZ3 153 aa11.03□□□□□ -0.64
SH3RF1-201ENST00000284637 LCA10Q71F78 164 aa11.03□□□□□ -0.64
SH3RF1-201ENST00000284637 COL4A2P08572 1712 aa11.03□□□□□ -0.64
SH3RF1-201ENST00000284637 FAM168BA1KXE4 195 aa11.02□□□□□ -0.65
SH3RF1-201ENST00000284637 PCSK5Q92824 1860 aa11.01□□□□□ -0.65
SH3RF1-201ENST00000284637 CHTF8P0CG12 524 aa11.01□□□□□ -0.65
SH3RF1-201ENST00000284637 OBSCN-AS1Q96MR7 158 aa11□□□□□ -0.65
SH3RF1-201ENST00000284637 LINC00588Q9Y4M8 146 aa11□□□□□ -0.65
SH3RF1-201ENST00000284637 MGAM2Q2M2H8 2515 aa10.98□□□□□ -0.65
SH3RF1-201ENST00000284637 C16orf90A8MZG2 172 aa10.98□□□□□ -0.65
SH3RF1-201ENST00000284637 IGLV8-61A0A075B6I0 122 aa10.98□□□□□ -0.65
SH3RF1-201ENST00000284637 FLNBO75369 2602 aaKnown RBP10.97□□□□□ -0.65
SH3RF1-201ENST00000284637 PCNTO95613 3336 aa10.97□□□□□ -0.65
SH3RF1-201ENST00000284637 LINC00528Q8N1L1 170 aa10.96□□□□□ -0.66
SH3RF1-201ENST00000284637 UTRNP46939 3433 aa10.95□□□□□ -0.66
SH3RF1-201ENST00000284637 CSNK1G2-AS1Q8NCQ2 148 aa10.95□□□□□ -0.66
SH3RF1-201ENST00000284637 Q1T7F1 81 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms