RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 J3QL48 77 aa2.88□□□□□ -1.95
SCN3A-201ENST00000283254 CRIP3Q6Q6R5 217 aa2.88□□□□□ -1.95
SCN3A-201ENST00000283254 C2orf91Q6ZV80 131 aa2.88□□□□□ -1.95
SCN3A-201ENST00000283254 PRLHP81277 87 aa2.87□□□□□ -1.95
SCN3A-201ENST00000283254 WWC2-AS2Q96NR7 200 aa2.87□□□□□ -1.95
SCN3A-201ENST00000283254 ZNF292O60281 2723 aa2.87□□□□□ -1.95
SCN3A-201ENST00000283254 C1orf64Q8NEQ6 169 aa2.87□□□□□ -1.95
SCN3A-201ENST00000283254 SBSPONQ8IVN8 264 aa2.87□□□□□ -1.95
SCN3A-201ENST00000283254 SMR3AQ99954 134 aa2.87□□□□□ -1.95
SCN3A-201ENST00000283254 IGLV5-39A0A0G2JS06 123 aa2.87□□□□□ -1.95
SCN3A-201ENST00000283254 KRTAP10-9P60411 292 aa2.87□□□□□ -1.95
SCN3A-201ENST00000283254 MOBPQ13875 183 aa2.87□□□□□ -1.95
SCN3A-201ENST00000283254 ATP11AUNQ6ZP68 121 aa2.87□□□□□ -1.95
SCN3A-201ENST00000283254 IGLV4-60A0A075B6I1 120 aa2.86□□□□□ -1.95
SCN3A-201ENST00000283254 BCE1O60756 84 aa2.86□□□□□ -1.95
SCN3A-201ENST00000283254 XGP55808 180 aa2.86□□□□□ -1.95
SCN3A-201ENST00000283254 NBDYA0A0U1RRE5 68 aa2.86□□□□□ -1.95
SCN3A-201ENST00000283254 Q6ZS46 218 aa2.86□□□□□ -1.95
SCN3A-201ENST00000283254 SPACA4Q8TDM5 124 aa2.86□□□□□ -1.95
SCN3A-201ENST00000283254 PCOTHQ58A44 107 aa2.86□□□□□ -1.95
SCN3A-201ENST00000283254 COL4A3Q01955 1670 aa2.86□□□□□ -1.95
SCN3A-201ENST00000283254 CHD6Q8TD26 2715 aa2.86□□□□□ -1.95
SCN3A-201ENST00000283254 ACYP2P14621 99 aa2.86□□□□□ -1.95
SCN3A-201ENST00000283254 C7orf65Q6ZTY9 151 aa2.86□□□□□ -1.95
SCN3A-201ENST00000283254 COX6B2Q6YFQ2 88 aa2.86□□□□□ -1.95
SCN3A-201ENST00000283254 C16orf90A8MZG2 172 aa2.85□□□□□ -1.95
SCN3A-201ENST00000283254 Q6ZRX8 168 aa2.85□□□□□ -1.95
SCN3A-201ENST00000283254 A0A087WYN8 130 aa2.85□□□□□ -1.95
SCN3A-201ENST00000283254 LOC101927531A0A1B0GV80 90 aa2.85□□□□□ -1.95
SCN3A-201ENST00000283254 LINC00694P0DN24 101 aa2.85□□□□□ -1.95
SCN3A-201ENST00000283254 Q6ZRU5 148 aa2.85□□□□□ -1.95
SCN3A-201ENST00000283254 C22orf24Q9Y442 160 aa2.85□□□□□ -1.95
SCN3A-201ENST00000283254 C6orf48Q9UBA6 75 aa2.85□□□□□ -1.95
SCN3A-201ENST00000283254 IGHV3OR16-9A0A0B4J2B5 98 aa2.85□□□□□ -1.95
SCN3A-201ENST00000283254 A0A1B0GU69 56 aa2.85□□□□□ -1.95
SCN3A-201ENST00000283254 SMCR5Q8TEV8 140 aa2.84□□□□□ -1.95
SCN3A-201ENST00000283254 YPEL4Q96NS1 127 aa2.84□□□□□ -1.95
SCN3A-201ENST00000283254 C11orf72Q8NBR9 251 aa2.84□□□□□ -1.95
SCN3A-201ENST00000283254 TRAV22A0A0B4J277 110 aa2.84□□□□□ -1.95
SCN3A-201ENST00000283254 C10orf142B7Z368 130 aa2.84□□□□□ -1.95
SCN3A-201ENST00000283254 MUC22E2RYF6 1773 aaPredicted RBP2.84□□□□□ -1.96
SCN3A-201ENST00000283254 ADAMTSL4-AS1Q5T5F5 129 aa2.84□□□□□ -1.96
SCN3A-201ENST00000283254 A0A087WVE0 104 aa2.83□□□□□ -1.96
SCN3A-201ENST00000283254 GVQW2A0A096LPI5 108 aaPredicted RBP2.83□□□□□ -1.96
SCN3A-201ENST00000283254 RTL8CO15255 209 aa2.83□□□□□ -1.96
SCN3A-201ENST00000283254 CDSNQ15517 529 aa2.83□□□□□ -1.96
SCN3A-201ENST00000283254 RETNLBQ9BQ08 111 aa2.83□□□□□ -1.96
SCN3A-201ENST00000283254 C8orf87E5RJ46 101 aa2.83□□□□□ -1.96
SCN3A-201ENST00000283254 CCDC179H3BU77 68 aa2.83□□□□□ -1.96
SCN3A-201ENST00000283254 VPREB1P12018 145 aa2.83□□□□□ -1.96
SCN3A-201ENST00000283254 IGLV5-45A0A087WSX0 123 aa2.83□□□□□ -1.96
SCN3A-201ENST00000283254 BPTFQ12830 3046 aa2.83□□□□□ -1.96
SCN3A-201ENST00000283254 A0A1W2PPR1 153 aa2.83□□□□□ -1.96
SCN3A-201ENST00000283254 PRM2P04554 102 aa2.83□□□□□ -1.96
SCN3A-201ENST00000283254 TYMSOSQ8TAI1 123 aa2.83□□□□□ -1.96
SCN3A-201ENST00000283254 TSPEAR-AS2P59090 65 aa2.83□□□□□ -1.96
SCN3A-201ENST00000283254 PRR3P79522 188 aaKnown RBP2.83□□□□□ -1.96
SCN3A-201ENST00000283254 LINC00167Q96N53 147 aa2.83□□□□□ -1.96
SCN3A-201ENST00000283254 PSPHP1O15172 72 aa2.82□□□□□ -1.96
SCN3A-201ENST00000283254 LINC00315P59091 139 aa2.82□□□□□ -1.96
SCN3A-201ENST00000283254 FLNCQ14315 2725 aa2.82□□□□□ -1.96
SCN3A-201ENST00000283254 GAS8-AS1O95177 125 aa2.82□□□□□ -1.96
SCN3A-201ENST00000283254 ELOF1P60002 83 aaKnown RBP2.82□□□□□ -1.96
SCN3A-201ENST00000283254 RPL37AP61513 92 aaKnown RBP2.82□□□□□ -1.96
SCN3A-201ENST00000283254 LOC110117498A0A087WWA1 95 aa2.82□□□□□ -1.96
SCN3A-201ENST00000283254 SOSTDC1Q6X4U4 206 aa2.82□□□□□ -1.96
SCN3A-201ENST00000283254 EPM2AB3EWF7 344 aa2.82□□□□□ -1.96
SCN3A-201ENST00000283254 SPAG11AQ6PDA7 123 aa2.81□□□□□ -1.96
SCN3A-201ENST00000283254 CPAMD8Q8IZJ3 1885 aa2.81□□□□□ -1.96
SCN3A-201ENST00000283254 LINC00313P59037 77 aa2.81□□□□□ -1.96
SCN3A-201ENST00000283254 TRBV7-4A0A0J9YYF1 115 aa2.8□□□□□ -1.96
SCN3A-201ENST00000283254 MAP1AP78559 2803 aaPredicted RBP2.8□□□□□ -1.96
SCN3A-201ENST00000283254 DNAH10OSP0CZ25 163 aa2.8□□□□□ -1.96
SCN3A-201ENST00000283254 LINC00846Q9NV44 126 aa2.8□□□□□ -1.96
SCN3A-201ENST00000283254 SPATA3Q8NHX4 192 aa2.8□□□□□ -1.96
SCN3A-201ENST00000283254 CDIP1Q9H305 208 aa2.8□□□□□ -1.96
SCN3A-201ENST00000283254 KIAA0087Q14695 138 aa2.8□□□□□ -1.96
SCN3A-201ENST00000283254 LINC00336Q6ZUF6 198 aa2.8□□□□□ -1.96
SCN3A-201ENST00000283254 LINC01546A6NGU7 62 aa2.79□□□□□ -1.96
SCN3A-201ENST00000283254 KRTAP24-1Q3LI83 254 aa2.79□□□□□ -1.96
SCN3A-201ENST00000283254 SMIM29Q86T20 159 aa2.79□□□□□ -1.96
SCN3A-201ENST00000283254 LINC00304Q8N9R0 145 aa2.79□□□□□ -1.96
SCN3A-201ENST00000283254 PRO0628Q9UI54 55 aa2.79□□□□□ -1.96
SCN3A-201ENST00000283254 TRANK1O15050 2925 aa2.79□□□□□ -1.96
SCN3A-201ENST00000283254 Q6ZSN1 163 aa2.79□□□□□ -1.96
SCN3A-201ENST00000283254 LINC00310P59036 64 aa2.79□□□□□ -1.96
SCN3A-201ENST00000283254 DEFB116Q30KQ4 102 aa2.79□□□□□ -1.96
SCN3A-201ENST00000283254 ST20-AS1Q8NBB2 130 aa2.78□□□□□ -1.96
SCN3A-201ENST00000283254 Q8NAQ8 132 aa2.78□□□□□ -1.96
SCN3A-201ENST00000283254 A0A096LNJ9 63 aa2.78□□□□□ -1.96
SCN3A-201ENST00000283254 A8MWP4 228 aa2.78□□□□□ -1.96
SCN3A-201ENST00000283254 ERC2-IT1O76042 136 aa2.78□□□□□ -1.96
SCN3A-201ENST00000283254 LINC00476Q8WZB0 136 aa2.78□□□□□ -1.96
SCN3A-201ENST00000283254 A8MTW9 85 aa2.78□□□□□ -1.96
SCN3A-201ENST00000283254 LINC00588Q9Y4M8 146 aa2.78□□□□□ -1.96
SCN3A-201ENST00000283254 CHD9Q3L8U1 2897 aa2.78□□□□□ -1.96
SCN3A-201ENST00000283254 SERTAD4-AS1Q5TG53 156 aa2.78□□□□□ -1.96
SCN3A-201ENST00000283254 SSBP3-AS1Q7Z2R9 100 aa2.78□□□□□ -1.96
SCN3A-201ENST00000283254 LINC01600Q96MT4 127 aa2.77□□□□□ -1.97
SCN3A-201ENST00000283254 CRIPTQ9P021 101 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms