RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 SPACA4Q8TDM5 124 aa6.19□□□□□ -1.42
NIPBL-201ENST00000282516 IGLV1-51P01701 117 aa6.19□□□□□ -1.42
NIPBL-201ENST00000282516 RPS28P62857 69 aaKnown RBP6.18□□□□□ -1.42
NIPBL-201ENST00000282516 MGAM2Q2M2H8 2515 aa6.18□□□□□ -1.42
NIPBL-201ENST00000282516 OXLD1Q5BKU9 147 aa6.17□□□□□ -1.42
NIPBL-201ENST00000282516 A8MTW9 85 aa6.17□□□□□ -1.42
NIPBL-201ENST00000282516 PCSK5Q92824 1860 aa6.17□□□□□ -1.42
NIPBL-201ENST00000282516 CRIPTQ9P021 101 aa6.17□□□□□ -1.42
NIPBL-201ENST00000282516 MUC22E2RYF6 1773 aaPredicted RBP6.16□□□□□ -1.42
NIPBL-201ENST00000282516 C11orf72Q8NBR9 251 aa6.16□□□□□ -1.42
NIPBL-201ENST00000282516 SPATA3Q8NHX4 192 aa6.16□□□□□ -1.42
NIPBL-201ENST00000282516 CRIP3Q6Q6R5 217 aa6.16□□□□□ -1.42
NIPBL-201ENST00000282516 LYPD5Q6UWN5 251 aa6.16□□□□□ -1.42
NIPBL-201ENST00000282516 EDN2P20800 178 aa6.15□□□□□ -1.42
NIPBL-201ENST00000282516 IGLV8-61A0A075B6I0 122 aa6.15□□□□□ -1.42
NIPBL-201ENST00000282516 SMCR5Q8TEV8 140 aa6.15□□□□□ -1.42
NIPBL-201ENST00000282516 Q8NBF4 154 aa6.15□□□□□ -1.42
NIPBL-201ENST00000282516 LINC00310P59036 64 aa6.15□□□□□ -1.42
NIPBL-201ENST00000282516 KIAA0087Q14695 138 aa6.15□□□□□ -1.43
NIPBL-201ENST00000282516 BRI3O95415 125 aa6.15□□□□□ -1.43
NIPBL-201ENST00000282516 NHLRC4P0CG21 123 aaPredicted RBP6.14□□□□□ -1.43
NIPBL-201ENST00000282516 ZNF580Q9UK33 172 aa6.14□□□□□ -1.43
NIPBL-201ENST00000282516 LOC110117498A0A087WWA1 95 aa6.14□□□□□ -1.43
NIPBL-201ENST00000282516 C4orf26Q17RF5 130 aa6.14□□□□□ -1.43
NIPBL-201ENST00000282516 C22orf24Q9Y442 160 aa6.14□□□□□ -1.43
NIPBL-201ENST00000282516 LOC101927531A0A1B0GV80 90 aa6.14□□□□□ -1.43
NIPBL-201ENST00000282516 CDIP1Q9H305 208 aa6.14□□□□□ -1.43
NIPBL-201ENST00000282516 Q6ZRU5 148 aa6.13□□□□□ -1.43
NIPBL-201ENST00000282516 LINC00313P59037 77 aa6.13□□□□□ -1.43
NIPBL-201ENST00000282516 IGLV5-39A0A0G2JS06 123 aa6.13□□□□□ -1.43
NIPBL-201ENST00000282516 COX8CQ7Z4L0 72 aa6.13□□□□□ -1.43
NIPBL-201ENST00000282516 LINC01600Q96MT4 127 aa6.12□□□□□ -1.43
NIPBL-201ENST00000282516 CR1P17927 2039 aa6.12□□□□□ -1.43
NIPBL-201ENST00000282516 WISP2O76076 250 aa6.12□□□□□ -1.43
NIPBL-201ENST00000282516 Q6ZRX8 168 aa6.11□□□□□ -1.43
NIPBL-201ENST00000282516 CYP4F30PQ9H0H9 118 aa6.1□□□□□ -1.43
NIPBL-201ENST00000282516 FLNBO75369 2602 aaKnown RBP6.1□□□□□ -1.43
NIPBL-201ENST00000282516 C16orf95Q9H693 158 aa6.1□□□□□ -1.43
NIPBL-201ENST00000282516 FAM229AH3BQW9 127 aa6.1□□□□□ -1.43
NIPBL-201ENST00000282516 UQCR11O14957 56 aa6.09□□□□□ -1.43
NIPBL-201ENST00000282516 URB1-AS1Q96HZ7 61 aa6.09□□□□□ -1.43
NIPBL-201ENST00000282516 ERC2-IT1O76042 136 aa6.09□□□□□ -1.43
NIPBL-201ENST00000282516 KIF25-AS1Q9Y6Z4 181 aa6.09□□□□□ -1.43
NIPBL-201ENST00000282516 LINC01546A6NGU7 62 aa6.09□□□□□ -1.44
NIPBL-201ENST00000282516 ELOF1P60002 83 aaKnown RBP6.09□□□□□ -1.44
NIPBL-201ENST00000282516 Q6ZSN1 163 aa6.09□□□□□ -1.44
NIPBL-201ENST00000282516 Q6ZQT0 140 aa6.08□□□□□ -1.44
NIPBL-201ENST00000282516 Q6ZRP5 223 aa6.08□□□□□ -1.44
NIPBL-201ENST00000282516 FHL3Q13643 280 aa6.07□□□□□ -1.44
NIPBL-201ENST00000282516 LINC00167Q96N53 147 aa6.07□□□□□ -1.44
NIPBL-201ENST00000282516 TYMSOSQ8TAI1 123 aa6.07□□□□□ -1.44
NIPBL-201ENST00000282516 A0A096LNJ9 63 aa6.06□□□□□ -1.44
NIPBL-201ENST00000282516 LINC00476Q8WZB0 136 aa6.06□□□□□ -1.44
NIPBL-201ENST00000282516 APLNQ9ULZ1 77 aa6.06□□□□□ -1.44
NIPBL-201ENST00000282516 EPM2AB3EWF7 344 aa6.06□□□□□ -1.44
NIPBL-201ENST00000282516 MDFIQ99750 246 aa6.06□□□□□ -1.44
NIPBL-201ENST00000282516 COX6B2Q6YFQ2 88 aa6.05□□□□□ -1.44
NIPBL-201ENST00000282516 COA5Q86WW8 74 aa6.05□□□□□ -1.44
NIPBL-201ENST00000282516 Q96NJ1 140 aa6.05□□□□□ -1.44
NIPBL-201ENST00000282516 A8MWP4 228 aa6.05□□□□□ -1.44
NIPBL-201ENST00000282516 IGHV3OR16-9A0A0B4J2B5 98 aa6.05□□□□□ -1.44
NIPBL-201ENST00000282516 BPTFQ12830 3046 aa6.04□□□□□ -1.44
NIPBL-201ENST00000282516 STAB1Q9NY15 2570 aa6.04□□□□□ -1.44
NIPBL-201ENST00000282516 TM2D3Q9BRN9 247 aa6.04□□□□□ -1.44
NIPBL-201ENST00000282516 TRBV7-4A0A0J9YYF1 115 aa6.04□□□□□ -1.44
NIPBL-201ENST00000282516 MIR22HGQ0VDD5 57 aa6.03□□□□□ -1.44
NIPBL-201ENST00000282516 C16orf90A8MZG2 172 aa6.03□□□□□ -1.44
NIPBL-201ENST00000282516 IGLV5-45A0A087WSX0 123 aa6.03□□□□□ -1.44
NIPBL-201ENST00000282516 PRRC2CQ9Y520 2896 aaKnown RBP6.02□□□□□ -1.45
NIPBL-201ENST00000282516 AVPP01185 164 aa6.02□□□□□ -1.45
NIPBL-201ENST00000282516 LUZP6Q538Z0 58 aa6.02□□□□□ -1.45
NIPBL-201ENST00000282516 RTL8CO15255 209 aa6.01□□□□□ -1.45
NIPBL-201ENST00000282516 SMR3AQ99954 134 aa6.01□□□□□ -1.45
NIPBL-201ENST00000282516 CD164Q04900 197 aa6.01□□□□□ -1.45
NIPBL-201ENST00000282516 ST20-AS1Q8NBB2 130 aa6.01□□□□□ -1.45
NIPBL-201ENST00000282516 FAM218AQ96MZ4 157 aa6.01□□□□□ -1.45
NIPBL-201ENST00000282516 H3BNG1 76 aa6.01□□□□□ -1.45
NIPBL-201ENST00000282516 NBEAL1Q6ZS30 2694 aa6□□□□□ -1.45
NIPBL-201ENST00000282516 CDC42SE1Q9NRR8 79 aa6□□□□□ -1.45
NIPBL-201ENST00000282516 CHTF8P0CG12 524 aa5.99□□□□□ -1.45
NIPBL-201ENST00000282516 AKAP13Q12802 2813 aa5.99□□□□□ -1.45
NIPBL-201ENST00000282516 GVQW2A0A096LPI5 108 aaPredicted RBP5.99□□□□□ -1.45
NIPBL-201ENST00000282516 KTN1-AS1Q86SY8 53 aa5.99□□□□□ -1.45
NIPBL-201ENST00000282516 J3QL48 77 aa5.98□□□□□ -1.45
NIPBL-201ENST00000282516 RPL37AP61513 92 aaKnown RBP5.98□□□□□ -1.45
NIPBL-201ENST00000282516 LINC01554Q52M75 96 aa5.97□□□□□ -1.45
NIPBL-201ENST00000282516 C9orf129Q5T035 196 aaKnown RBP5.97□□□□□ -1.45
NIPBL-201ENST00000282516 PRO0461Q9UI25 63 aa5.97□□□□□ -1.45
NIPBL-201ENST00000282516 CFAP46Q8IYW2 2715 aa5.97□□□□□ -1.45
NIPBL-201ENST00000282516 FAM19A4Q96LR4 140 aa5.97□□□□□ -1.45
NIPBL-201ENST00000282516 MRPL34Q9BQ48 92 aaKnown RBP5.97□□□□□ -1.45
NIPBL-201ENST00000282516 CENPEQ02224 2701 aa5.97□□□□□ -1.45
NIPBL-201ENST00000282516 A8MUN3 132 aa5.96□□□□□ -1.45
NIPBL-201ENST00000282516 PHF5AQ7RTV0 110 aaKnown RBP5.96□□□□□ -1.46
NIPBL-201ENST00000282516 NBDYA0A0U1RRE5 68 aa5.96□□□□□ -1.46
NIPBL-201ENST00000282516 LINC00315P59091 139 aa5.95□□□□□ -1.46
NIPBL-201ENST00000282516 DMBT1Q9UGM3 2413 aaPredicted RBP5.95□□□□□ -1.46
NIPBL-201ENST00000282516 SMCPP49901 116 aaPredicted RBP5.95□□□□□ -1.46
NIPBL-201ENST00000282516 FLNAP21333 2647 aaKnown RBP5.94□□□□□ -1.46
NIPBL-201ENST00000282516 IGLV6-57P01721 117 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms