RNA–Protein interactions for RNA: ENST00000274026.9

CCNA2-201, Transcript of cyclin A2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNA2, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2-201ENST00000274026 TEX15Q9BXT5 2789 aa11.28□□□□□ -0.6
CCNA2-201ENST00000274026 IGLV6-57P01721 117 aa11.28□□□□□ -0.6
CCNA2-201ENST00000274026 SPATA3Q8NHX4 192 aa11.28□□□□□ -0.6
CCNA2-201ENST00000274026 TM2D3Q9BRN9 247 aa11.28□□□□□ -0.6
CCNA2-201ENST00000274026 LINC00612Q8N6U2 182 aa11.26□□□□□ -0.61
CCNA2-201ENST00000274026 PTPN13Q12923 2485 aa11.26□□□□□ -0.61
CCNA2-201ENST00000274026 TRBV7-4A0A0J9YYF1 115 aa11.26□□□□□ -0.61
CCNA2-201ENST00000274026 LINC01006Q8NI28 216 aa11.25□□□□□ -0.61
CCNA2-201ENST00000274026 IGLV1-51P01701 117 aa11.25□□□□□ -0.61
CCNA2-201ENST00000274026 REG3AQ06141 175 aa11.25□□□□□ -0.61
CCNA2-201ENST00000274026 SCXQ7RTU7 201 aa11.25□□□□□ -0.61
CCNA2-201ENST00000274026 PRO0255Q9UI72 69 aa11.25□□□□□ -0.61
CCNA2-201ENST00000274026 TRBV7-6A0A0J9YX20 115 aa11.24□□□□□ -0.61
CCNA2-201ENST00000274026 ATP5EP56381 51 aaPredicted RBP11.24□□□□□ -0.61
CCNA2-201ENST00000274026 C10orf25Q5T742 122 aa11.24□□□□□ -0.61
CCNA2-201ENST00000274026 BBC3Q96PG8 261 aaPredicted RBP11.24□□□□□ -0.61
CCNA2-201ENST00000274026 ANGP03950 147 aaKnown RBP11.24□□□□□ -0.61
CCNA2-201ENST00000274026 PRB1P04280 392 aa11.24□□□□□ -0.61
CCNA2-201ENST00000274026 MIFP14174 115 aa11.24□□□□□ -0.61
CCNA2-201ENST00000274026 UNQ6190/PRO20217Q6UXQ8 127 aa11.24□□□□□ -0.61
CCNA2-201ENST00000274026 NIPBLQ6KC79 2804 aaeCLIP11.24□□□□□ -0.614e-12■■□□□ 12
CCNA2-201ENST00000274026 NREPQ16612 68 aa11.22□□□□□ -0.61
CCNA2-201ENST00000274026 SPAG11BQ08648 103 aa11.21□□□□□ -0.61
CCNA2-201ENST00000274026 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.21□□□□□ -0.62
CCNA2-201ENST00000274026 DIRC1Q969H9 104 aa11.21□□□□□ -0.62
CCNA2-201ENST00000274026 LINC00474Q9P2X8 69 aa11.21□□□□□ -0.62
CCNA2-201ENST00000274026 A0A0J9YWU9 116 aa11.2□□□□□ -0.62
CCNA2-201ENST00000274026 DNAJC9-AS1A6NH13 148 aa11.2□□□□□ -0.62
CCNA2-201ENST00000274026 IGHV4-30-4P0DP06 118 aa11.2□□□□□ -0.62
CCNA2-201ENST00000274026 C1orf43Q9BWL3 253 aa11.19□□□□□ -0.62
CCNA2-201ENST00000274026 TMEM254Q8TBM7 123 aa11.19□□□□□ -0.62
CCNA2-201ENST00000274026 CYSRT1A8MQ03 144 aa11.18□□□□□ -0.62
CCNA2-201ENST00000274026 BPY2O14599 106 aa11.18□□□□□ -0.62
CCNA2-201ENST00000274026 WFDC11Q8NEX6 87 aa11.18□□□□□ -0.62
CCNA2-201ENST00000274026 FN1P02751 2386 aaKnown RBP11.18□□□□□ -0.62
CCNA2-201ENST00000274026 ERC2-IT1O76042 136 aa11.17□□□□□ -0.62
CCNA2-201ENST00000274026 NF1P21359 2839 aa11.17□□□□□ -0.62
CCNA2-201ENST00000274026 COX7BP24311 80 aa11.16□□□□□ -0.62
CCNA2-201ENST00000274026 ZNF73O43830 326 aaPredicted RBP11.15□□□□□ -0.62
CCNA2-201ENST00000274026 NAV2Q8IVL1 2488 aa11.14□□□□□ -0.63
CCNA2-201ENST00000274026 CCDC168Q8NDH2 2452 aa11.14□□□□□ -0.63
CCNA2-201ENST00000274026 X6R8D5 127 aa11.14□□□□□ -0.63
CCNA2-201ENST00000274026 SETD2Q9BYW2 2564 aaPredicted RBP11.13□□□□□ -0.63
CCNA2-201ENST00000274026 ELOF1P60002 83 aaKnown RBP11.13□□□□□ -0.63
CCNA2-201ENST00000274026 ESM1Q9NQ30 184 aa11.13□□□□□ -0.63
CCNA2-201ENST00000274026 SONP18583 2426 aaKnown RBP11.12□□□□□ -0.63
CCNA2-201ENST00000274026 XAGE1AQ9HD64 81 aa11.12□□□□□ -0.63
CCNA2-201ENST00000274026 GVQW2A0A096LPI5 108 aaPredicted RBP11.11□□□□□ -0.63
CCNA2-201ENST00000274026 KRTAP10-9P60411 292 aa11.11□□□□□ -0.63
CCNA2-201ENST00000274026 DEFB113Q30KQ7 82 aa11.11□□□□□ -0.63
CCNA2-201ENST00000274026 PKIGQ9Y2B9 76 aa11.11□□□□□ -0.63
CCNA2-201ENST00000274026 Q8N9L7 120 aa11.11□□□□□ -0.63
CCNA2-201ENST00000274026 TENM4Q6N022 2769 aa11.1□□□□□ -0.63
CCNA2-201ENST00000274026 APCP25054 2843 aa11.1□□□□□ -0.63
CCNA2-201ENST00000274026 IGKV4-1P06312 121 aa11.1□□□□□ -0.63
CCNA2-201ENST00000274026 PRYO14603 147 aa11.09□□□□□ -0.63
CCNA2-201ENST00000274026 BRK1Q8WUW1 75 aa11.09□□□□□ -0.63
CCNA2-201ENST00000274026 OCR1Q9BZK8 76 aa11.09□□□□□ -0.63
CCNA2-201ENST00000274026 C6orf48Q9UBA6 75 aa11.09□□□□□ -0.63
CCNA2-201ENST00000274026 A0A0U1RQV1 116 aa11.09□□□□□ -0.63
CCNA2-201ENST00000274026 LYRM9A8MSI8 78 aa11.09□□□□□ -0.63
CCNA2-201ENST00000274026 FAM229BQ4G0N7 80 aa11.09□□□□□ -0.63
CCNA2-201ENST00000274026 NBEAL2Q6ZNJ1 2754 aa11.07□□□□□ -0.64
CCNA2-201ENST00000274026 GCN1Q92616 2671 aaKnown RBP11.07□□□□□ -0.64
CCNA2-201ENST00000274026 FUSP35637 526 aaKnown RBP eCLIP11.05□□□□□ -0.64
CCNA2-201ENST00000274026 MPLKIPQ8TAP9 179 aa11.05□□□□□ -0.64
CCNA2-201ENST00000274026 UBR5O95071 2799 aaPredicted RBP11.05□□□□□ -0.64
CCNA2-201ENST00000274026 KLK12Q9UKR0 248 aa11.05□□□□□ -0.64
CCNA2-201ENST00000274026 PRR34Q9NV39 138 aa11.05□□□□□ -0.64
CCNA2-201ENST00000274026 DEFB4AO15263 64 aa11.04□□□□□ -0.64
CCNA2-201ENST00000274026 VPREB1P12018 145 aa11.04□□□□□ -0.64
CCNA2-201ENST00000274026 ESRGQ1W209 222 aa11.03□□□□□ -0.64
CCNA2-201ENST00000274026 LINC00528Q8N1L1 170 aa11.03□□□□□ -0.64
CCNA2-201ENST00000274026 CELA1Q9UNI1 258 aa11.03□□□□□ -0.64
CCNA2-201ENST00000274026 LELP1Q5T871 98 aa11.03□□□□□ -0.64
CCNA2-201ENST00000274026 Q6ZTC4 211 aa11.02□□□□□ -0.64
CCNA2-201ENST00000274026 KRTAP1-3Q8IUG1 177 aa11.02□□□□□ -0.65
CCNA2-201ENST00000274026 ACANP16112 2415 aa11.02□□□□□ -0.65
CCNA2-201ENST00000274026 M0R378 163 aa11.01□□□□□ -0.65
CCNA2-201ENST00000274026 DAD1P61803 113 aa11.01□□□□□ -0.65
CCNA2-201ENST00000274026 HIGD2BQ4VC39 106 aa11.01□□□□□ -0.65
CCNA2-201ENST00000274026 HIGD2AQ9BW72 106 aa11□□□□□ -0.65
CCNA2-201ENST00000274026 HELZ2Q9BYK8 2649 aaKnown RBP10.99□□□□□ -0.65
CCNA2-201ENST00000274026 C3orf84H3BNL1 204 aa10.99□□□□□ -0.65
CCNA2-201ENST00000274026 ITPR2Q14571 2701 aa10.98□□□□□ -0.65
CCNA2-201ENST00000274026 ITPR3Q14573 2671 aa10.97□□□□□ -0.65
CCNA2-201ENST00000274026 DEFB135Q30KP9 77 aa10.97□□□□□ -0.65
CCNA2-201ENST00000274026 C1orf195Q5TG92 126 aa10.97□□□□□ -0.65
CCNA2-201ENST00000274026 CAMK2N2Q96S95 79 aa10.97□□□□□ -0.65
CCNA2-201ENST00000274026 F8WDY8 70 aa10.95□□□□□ -0.66
CCNA2-201ENST00000274026 EGFEM1PQ0D2K5 195 aa10.95□□□□□ -0.66
CCNA2-201ENST00000274026 MTORP42345 2549 aa10.95□□□□□ -0.66
CCNA2-201ENST00000274026 NOTCH2Q04721 2471 aa10.95□□□□□ -0.66
CCNA2-201ENST00000274026 HTN3P15516 51 aa10.94□□□□□ -0.66
CCNA2-201ENST00000274026 FLNAP21333 2647 aaKnown RBP10.93□□□□□ -0.66
CCNA2-201ENST00000274026 SMIM29Q86T20 159 aa10.92□□□□□ -0.66
CCNA2-201ENST00000274026 FAM30AQ9NZY2 134 aa10.92□□□□□ -0.66
CCNA2-201ENST00000274026 HECTD1Q9ULT8 2610 aa10.91□□□□□ -0.66
CCNA2-201ENST00000274026 Q6ZRU5 148 aa10.91□□□□□ -0.66
CCNA2-201ENST00000274026 DEFB105AQ8NG35 78 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms