RNA–Protein interactions for RNA: ENST00000267064.8

SMARCC2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-201ENST00000267064 SIGMAR1Q99720 223 aa12.59□□□□□ -0.39
SMARCC2-201ENST00000267064 LINC01556Q5JQF7 62 aa12.59□□□□□ -0.39
SMARCC2-201ENST00000267064 NKAPP1Q8N9T2 125 aa12.59□□□□□ -0.39
SMARCC2-201ENST00000267064 C6orf48Q9UBA6 75 aa12.57□□□□□ -0.4
SMARCC2-201ENST00000267064 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.57□□□□□ -0.4
SMARCC2-201ENST00000267064 H0YGX0 51 aa12.57□□□□□ -0.4
SMARCC2-201ENST00000267064 COX17Q14061 63 aa12.57□□□□□ -0.4
SMARCC2-201ENST00000267064 M0R2N4 97 aa12.56□□□□□ -0.4
SMARCC2-201ENST00000267064 GAGE2AQ6NT46 116 aa12.56□□□□□ -0.4
SMARCC2-201ENST00000267064 A0A087WYN8 130 aa12.55□□□□□ -0.4
SMARCC2-201ENST00000267064 FAM218AQ96MZ4 157 aa12.55□□□□□ -0.4
SMARCC2-201ENST00000267064 H3BT86 120 aa12.55□□□□□ -0.4
SMARCC2-201ENST00000267064 LINC01561Q8N1V8 128 aa12.55□□□□□ -0.4
SMARCC2-201ENST00000267064 IGKV2-24A0A0C4DH68 120 aa12.54□□□□□ -0.4
SMARCC2-201ENST00000267064 USP17L23D6RBM5 183 aa12.54□□□□□ -0.4
SMARCC2-201ENST00000267064 LAMTOR3Q9UHA4 124 aa12.54□□□□□ -0.4
SMARCC2-201ENST00000267064 RPL28P46779 137 aaKnown RBP12.53□□□□□ -0.4
SMARCC2-201ENST00000267064 ORMDL1Q9P0S3 153 aa12.5□□□□□ -0.41
SMARCC2-201ENST00000267064 TRBV10-3A0A0K0K1G6 114 aa12.49□□□□□ -0.41
SMARCC2-201ENST00000267064 CASC10Q5T4H9 136 aa12.49□□□□□ -0.41
SMARCC2-201ENST00000267064 TRACP01848 142 aa12.48□□□□□ -0.41
SMARCC2-201ENST00000267064 C14orf132Q9NPU4 83 aa12.47□□□□□ -0.41
SMARCC2-201ENST00000267064 DNAH10OSP0CZ25 163 aa12.46□□□□□ -0.41
SMARCC2-201ENST00000267064 TTC32Q5I0X7 151 aa12.46□□□□□ -0.41
SMARCC2-201ENST00000267064 DIRC1Q969H9 104 aa12.46□□□□□ -0.41
SMARCC2-201ENST00000267064 C15orf56Q8N910 161 aa12.46□□□□□ -0.42
SMARCC2-201ENST00000267064 FAM19A5Q7Z5A7 132 aaPredicted RBP12.45□□□□□ -0.42
SMARCC2-201ENST00000267064 RPL37AP8A6NKH3 93 aa12.45□□□□□ -0.42
SMARCC2-201ENST00000267064 DEFB105AQ8NG35 78 aa12.45□□□□□ -0.42
SMARCC2-201ENST00000267064 B9D2Q9BPU9 175 aa12.45□□□□□ -0.42
SMARCC2-201ENST00000267064 NDUFC2-KCTD14E9PQ53 114 aa12.45□□□□□ -0.42
SMARCC2-201ENST00000267064 TRAV23DV6A0A075B6W5 121 aa12.43□□□□□ -0.42
SMARCC2-201ENST00000267064 NDUFC2O95298 119 aa12.42□□□□□ -0.42
SMARCC2-201ENST00000267064 INAFM2P0DMQ5 153 aa12.42□□□□□ -0.42
SMARCC2-201ENST00000267064 MT-ATP8P03928 68 aa12.41□□□□□ -0.42
SMARCC2-201ENST00000267064 hADV29S1A0JD25 119 aa12.41□□□□□ -0.42
SMARCC2-201ENST00000267064 C2orf48Q96LS8 159 aa12.4□□□□□ -0.42
SMARCC2-201ENST00000267064 Q6ZRP5 223 aa12.4□□□□□ -0.42
SMARCC2-201ENST00000267064 Q6ZQY7 126 aa12.39□□□□□ -0.43
SMARCC2-201ENST00000267064 Q8NDZ9 215 aa12.39□□□□□ -0.43
SMARCC2-201ENST00000267064 COX7BP24311 80 aa12.39□□□□□ -0.43
SMARCC2-201ENST00000267064 TENM2Q9NT68 2774 aa12.39□□□□□ -0.43
SMARCC2-201ENST00000267064 ZNF73O43830 326 aaPredicted RBP12.38□□□□□ -0.43
SMARCC2-201ENST00000267064 M0R378 163 aa12.37□□□□□ -0.43
SMARCC2-201ENST00000267064 XGP55808 180 aa12.36□□□□□ -0.43
SMARCC2-201ENST00000267064 Q8N814 137 aa12.36□□□□□ -0.43
SMARCC2-201ENST00000267064 ETDCA0A1B0GVM5 59 aa12.35□□□□□ -0.43
SMARCC2-201ENST00000267064 NUPR2A6NF83 97 aa12.35□□□□□ -0.43
SMARCC2-201ENST00000267064 GVQW2A0A096LPI5 108 aaPredicted RBP12.33□□□□□ -0.44
SMARCC2-201ENST00000267064 UBE2BP63146 152 aa12.33□□□□□ -0.44
SMARCC2-201ENST00000267064 MUC7Q8TAX7 377 aa12.32□□□□□ -0.44
SMARCC2-201ENST00000267064 TMEM256-PLSCR3K7ERE1 68 aa12.32□□□□□ -0.44
SMARCC2-201ENST00000267064 FAM168BA1KXE4 195 aa12.32□□□□□ -0.44
SMARCC2-201ENST00000267064 NHLRC4P0CG21 123 aaPredicted RBP12.31□□□□□ -0.44
SMARCC2-201ENST00000267064 KRTAP26-1Q6PEX3 210 aa12.3□□□□□ -0.44
SMARCC2-201ENST00000267064 CDIP1Q9H305 208 aa12.3□□□□□ -0.44
SMARCC2-201ENST00000267064 LY6G6CO95867 125 aa12.29□□□□□ -0.44
SMARCC2-201ENST00000267064 VPREB1P12018 145 aa12.28□□□□□ -0.44
SMARCC2-201ENST00000267064 LOC107984640A0A0U1RRK4 108 aa12.28□□□□□ -0.44
SMARCC2-201ENST00000267064 SERTAD4-AS1Q5TG53 156 aa12.28□□□□□ -0.44
SMARCC2-201ENST00000267064 LINC00575Q6W349 94 aa12.28□□□□□ -0.44
SMARCC2-201ENST00000267064 DSCR8Q96T75 97 aa12.27□□□□□ -0.44
SMARCC2-201ENST00000267064 APLNQ9ULZ1 77 aa12.27□□□□□ -0.44
SMARCC2-201ENST00000267064 C7orf33Q8WU49 177 aa12.27□□□□□ -0.45
SMARCC2-201ENST00000267064 IGKV3D-7A0A0C4DH55 119 aa12.26□□□□□ -0.45
SMARCC2-201ENST00000267064 KRTAP1-5Q9BYS1 174 aa12.26□□□□□ -0.45
SMARCC2-201ENST00000267064 RBM3P98179 157 aaKnown RBP12.26□□□□□ -0.45
SMARCC2-201ENST00000267064 C9orf129Q5T035 196 aaKnown RBP12.26□□□□□ -0.45
SMARCC2-201ENST00000267064 PPDPFQ9H3Y8 114 aa12.25□□□□□ -0.45
SMARCC2-201ENST00000267064 HIST1H4AP62805 103 aaKnown RBP12.24□□□□□ -0.45
SMARCC2-201ENST00000267064 GHRHP01286 108 aa12.24□□□□□ -0.45
SMARCC2-201ENST00000267064 FUSP35637 526 aaKnown RBP eCLIP12.24□□□□□ -0.45
SMARCC2-201ENST00000267064 IGLV6-57P01721 117 aa12.23□□□□□ -0.45
SMARCC2-201ENST00000267064 HIGD2AQ9BW72 106 aa12.23□□□□□ -0.45
SMARCC2-201ENST00000267064 M0QXV9 152 aa12.23□□□□□ -0.45
SMARCC2-201ENST00000267064 JMJD7-PLA2G4BH0Y9G9 81 aa12.23□□□□□ -0.45
SMARCC2-201ENST00000267064 CHTF8P0CG12 524 aa12.22□□□□□ -0.45
SMARCC2-201ENST00000267064 C22orf24Q9Y442 160 aa12.22□□□□□ -0.45
SMARCC2-201ENST00000267064 C14orf177Q52M58 125 aa12.22□□□□□ -0.45
SMARCC2-201ENST00000267064 NBDYA0A0U1RRE5 68 aa12.21□□□□□ -0.45
SMARCC2-201ENST00000267064 ANAPC13Q9BS18 74 aa12.21□□□□□ -0.46
SMARCC2-201ENST00000267064 HAMPP81172 84 aa12.21□□□□□ -0.46
SMARCC2-201ENST00000267064 UPK3BQ9BT76 320 aa12.2□□□□□ -0.46
SMARCC2-201ENST00000267064 ACYP1P07311 99 aa12.2□□□□□ -0.46
SMARCC2-201ENST00000267064 LINC00167Q96N53 147 aa12.2□□□□□ -0.46
SMARCC2-201ENST00000267064 FAM19A1Q7Z5A9 133 aa12.19□□□□□ -0.46
SMARCC2-201ENST00000267064 A0A1B0GX51 115 aa12.18□□□□□ -0.46
SMARCC2-201ENST00000267064 MRPL55Q7Z7F7 128 aaKnown RBP12.18□□□□□ -0.46
SMARCC2-201ENST00000267064 F8WDY8 70 aa12.16□□□□□ -0.46
SMARCC2-201ENST00000267064 A0A096LNI7 61 aa12.16□□□□□ -0.46
SMARCC2-201ENST00000267064 SDIM1Q6ZPB5 146 aa12.16□□□□□ -0.46
SMARCC2-201ENST00000267064 UBL5Q9BZL1 73 aa12.16□□□□□ -0.46
SMARCC2-201ENST00000267064 SCGB1A1P11684 91 aa12.15□□□□□ -0.46
SMARCC2-201ENST00000267064 TGP01266 2768 aa12.14□□□□□ -0.47
SMARCC2-201ENST00000267064 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.12□□□□□ -0.47
SMARCC2-201ENST00000267064 PRLHP81277 87 aa12.12□□□□□ -0.47
SMARCC2-201ENST00000267064 ELOF1P60002 83 aaKnown RBP12.11□□□□□ -0.47
SMARCC2-201ENST00000267064 C3orf22Q8N5N4 141 aa12.11□□□□□ -0.47
SMARCC2-201ENST00000267064 LINC00846Q9NV44 126 aa12.11□□□□□ -0.47
SMARCC2-201ENST00000267064 LINC00643Q86TS7 51 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms