RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 LINC00575Q6W349 94 aa9.5□□□□□ -0.89
CDH1-201ENST00000261769 SETXQ7Z333 2677 aaKnown RBP9.49□□□□□ -0.89
CDH1-201ENST00000261769 HTTP42858 3142 aa9.49□□□□□ -0.89
CDH1-201ENST00000261769 Q6ZRP5 223 aa9.49□□□□□ -0.89
CDH1-201ENST00000261769 GVQW2A0A096LPI5 108 aaPredicted RBP9.49□□□□□ -0.89
CDH1-201ENST00000261769 A0A087WYN8 130 aa9.47□□□□□ -0.89
CDH1-201ENST00000261769 FAM19A3Q7Z5A8 133 aa9.47□□□□□ -0.89
CDH1-201ENST00000261769 LINC00337Q8N6G1 96 aa9.47□□□□□ -0.89
CDH1-201ENST00000261769 C5orf47Q569G3 176 aa9.46□□□□□ -0.9
CDH1-201ENST00000261769 A0A087WSZ3 146 aa9.46□□□□□ -0.9
CDH1-201ENST00000261769 TEP1Q99973 2627 aaKnown RBP9.46□□□□□ -0.9
CDH1-201ENST00000261769 C20orf197Q8N268 126 aa9.45□□□□□ -0.9
CDH1-201ENST00000261769 Q8N3U1 123 aa9.45□□□□□ -0.9
CDH1-201ENST00000261769 TRANK1O15050 2925 aa9.45□□□□□ -0.9
CDH1-201ENST00000261769 PLA2G1BP04054 148 aaKnown RBP9.45□□□□□ -0.9
CDH1-201ENST00000261769 IMUPQ9GZP8 106 aa9.44□□□□□ -0.9
CDH1-201ENST00000261769 GIG44P09565 113 aaPredicted RBP9.43□□□□□ -0.9
CDH1-201ENST00000261769 CRYGAP11844 174 aa9.43□□□□□ -0.9
CDH1-201ENST00000261769 BPTFQ12830 3046 aa9.43□□□□□ -0.9
CDH1-201ENST00000261769 IGHV6-1A0A0B4J1U7 121 aa9.43□□□□□ -0.9
CDH1-201ENST00000261769 XGP55808 180 aa9.42□□□□□ -0.9
CDH1-201ENST00000261769 LINC00612Q8N6U2 182 aa9.42□□□□□ -0.9
CDH1-201ENST00000261769 Q8N9L7 120 aa9.42□□□□□ -0.9
CDH1-201ENST00000261769 PHF5AQ7RTV0 110 aaKnown RBP9.41□□□□□ -0.9
CDH1-201ENST00000261769 TRBV7-6A0A0J9YX20 115 aa9.4□□□□□ -0.9
CDH1-201ENST00000261769 FAM240AA0A1B0GVK7 77 aa9.39□□□□□ -0.91
CDH1-201ENST00000261769 LINC00336Q6ZUF6 198 aa9.39□□□□□ -0.91
CDH1-201ENST00000261769 UQCRQO14949 82 aa9.38□□□□□ -0.91
CDH1-201ENST00000261769 C3orf22Q8N5N4 141 aa9.38□□□□□ -0.91
CDH1-201ENST00000261769 BAHCC1Q9P281 2608 aa9.38□□□□□ -0.91
CDH1-201ENST00000261769 STAB1Q9NY15 2570 aa9.37□□□□□ -0.91
CDH1-201ENST00000261769 MOBPQ13875 183 aa9.37□□□□□ -0.91
CDH1-201ENST00000261769 C5orf42Q9H799 3197 aa9.35□□□□□ -0.91
CDH1-201ENST00000261769 NDUFC1O43677 76 aa9.35□□□□□ -0.91
CDH1-201ENST00000261769 PRR34Q9NV39 138 aa9.35□□□□□ -0.91
CDH1-201ENST00000261769 KIAA0087Q14695 138 aa9.35□□□□□ -0.91
CDH1-201ENST00000261769 Q6ZVQ6 151 aa9.35□□□□□ -0.91
CDH1-201ENST00000261769 BCE1O60756 84 aa9.35□□□□□ -0.91
CDH1-201ENST00000261769 CHTF8P0CG12 524 aa9.35□□□□□ -0.91
CDH1-201ENST00000261769 CCDC179H3BU77 68 aa9.34□□□□□ -0.91
CDH1-201ENST00000261769 SPTSSBQ8NFR3 76 aa9.34□□□□□ -0.91
CDH1-201ENST00000261769 UNC79Q9P2D8 2635 aa9.34□□□□□ -0.91
CDH1-201ENST00000261769 RPL37AP61513 92 aaKnown RBP9.34□□□□□ -0.91
CDH1-201ENST00000261769 TYMSOSQ8TAI1 123 aa9.34□□□□□ -0.91
CDH1-201ENST00000261769 Q6ZRX8 168 aa9.34□□□□□ -0.91
CDH1-201ENST00000261769 SPACA4Q8TDM5 124 aa9.34□□□□□ -0.91
CDH1-201ENST00000261769 J3QL48 77 aa9.33□□□□□ -0.92
CDH1-201ENST00000261769 SERP2Q8N6R1 65 aa9.33□□□□□ -0.92
CDH1-201ENST00000261769 EPM2AB3EWF7 344 aa9.33□□□□□ -0.92
CDH1-201ENST00000261769 ELOF1P60002 83 aaKnown RBP9.32□□□□□ -0.92
CDH1-201ENST00000261769 APLNQ9ULZ1 77 aa9.32□□□□□ -0.92
CDH1-201ENST00000261769 A0A087WTM6 91 aa9.32□□□□□ -0.92
CDH1-201ENST00000261769 LINC01547P58512 204 aaPredicted RBP9.32□□□□□ -0.92
CDH1-201ENST00000261769 Q8NBF4 154 aa9.32□□□□□ -0.92
CDH1-201ENST00000261769 COL6A5A8TX70 2615 aa9.31□□□□□ -0.92
CDH1-201ENST00000261769 WIPF1O43516 503 aa9.31□□□□□ -0.92
CDH1-201ENST00000261769 FAM236DA0A1B0GTK5 79 aa9.3□□□□□ -0.92
CDH1-201ENST00000261769 FAM236CP0DP71 79 aa9.3□□□□□ -0.92
CDH1-201ENST00000261769 BRK1Q8WUW1 75 aa9.3□□□□□ -0.92
CDH1-201ENST00000261769 FAM30AQ9NZY2 134 aa9.3□□□□□ -0.92
CDH1-201ENST00000261769 SOSTDC1Q6X4U4 206 aa9.29□□□□□ -0.92
CDH1-201ENST00000261769 A0A1B0GW54 56 aa9.29□□□□□ -0.92
CDH1-201ENST00000261769 K7ERS5 55 aa9.29□□□□□ -0.92
CDH1-201ENST00000261769 SERP1Q9Y6X1 66 aa9.28□□□□□ -0.92
CDH1-201ENST00000261769 IGSF10Q6WRI0 2623 aa9.28□□□□□ -0.92
CDH1-201ENST00000261769 PRR15LQ9BU68 103 aa9.28□□□□□ -0.92
CDH1-201ENST00000261769 VPREB1P12018 145 aa9.27□□□□□ -0.93
CDH1-201ENST00000261769 ATP5EP56381 51 aaPredicted RBP9.27□□□□□ -0.93
CDH1-201ENST00000261769 C9orf163Q8N9P6 203 aa9.27□□□□□ -0.93
CDH1-201ENST00000261769 LINC00208Q96KT6 92 aa9.27□□□□□ -0.93
CDH1-201ENST00000261769 DEFB116Q30KQ4 102 aa9.26□□□□□ -0.93
CDH1-201ENST00000261769 MGAQ8IWI9 3026 aa9.26□□□□□ -0.93
CDH1-201ENST00000261769 A0A0U1RQV1 116 aa9.26□□□□□ -0.93
CDH1-201ENST00000261769 TEX15Q9BXT5 2789 aa9.25□□□□□ -0.93
CDH1-201ENST00000261769 TRAV7A0A075B6U4 112 aa9.23□□□□□ -0.93
CDH1-201ENST00000261769 LAMA3Q16787 3333 aa9.23□□□□□ -0.93
CDH1-201ENST00000261769 C15orf56Q8N910 161 aa9.23□□□□□ -0.93
CDH1-201ENST00000261769 SNURFQ9Y675 71 aa9.23□□□□□ -0.93
CDH1-201ENST00000261769 HCG22E2RYF7 251 aa9.22□□□□□ -0.93
CDH1-201ENST00000261769 DSPP15924 2871 aaKnown RBP9.22□□□□□ -0.93
CDH1-201ENST00000261769 ZNF575Q86XF7 245 aa9.22□□□□□ -0.93
CDH1-201ENST00000261769 CHD6Q8TD26 2715 aa9.21□□□□□ -0.93
CDH1-201ENST00000261769 LINC00476Q8WZB0 136 aa9.21□□□□□ -0.93
CDH1-201ENST00000261769 RETNLBQ9BQ08 111 aa9.21□□□□□ -0.93
CDH1-201ENST00000261769 Q6Q795 121 aa9.2□□□□□ -0.94
CDH1-201ENST00000261769 V9GYY9 64 aa9.2□□□□□ -0.94
CDH1-201ENST00000261769 IGLV6-57P01721 117 aa9.2□□□□□ -0.94
CDH1-201ENST00000261769 COX7CP15954 63 aa9.2□□□□□ -0.94
CDH1-201ENST00000261769 IGLV1-50A0A075B6I6 118 aa9.2□□□□□ -0.94
CDH1-201ENST00000261769 FAM168BA1KXE4 195 aa9.2□□□□□ -0.94
CDH1-201ENST00000261769 CR1P17927 2039 aa9.19□□□□□ -0.94
CDH1-201ENST00000261769 PRR4Q16378 134 aa9.19□□□□□ -0.94
CDH1-201ENST00000261769 LINC00846Q9NV44 126 aa9.19□□□□□ -0.94
CDH1-201ENST00000261769 SERTAD4-AS1Q5TG53 156 aa9.19□□□□□ -0.94
CDH1-201ENST00000261769 KCNQ1DNQ9H478 68 aa9.19□□□□□ -0.94
CDH1-201ENST00000261769 TLX1NBP0CAT3 122 aa9.19□□□□□ -0.94
CDH1-201ENST00000261769 CXCL6P80162 114 aa9.19□□□□□ -0.94
CDH1-201ENST00000261769 ST20-AS1Q8NBB2 130 aa9.18□□□□□ -0.94
CDH1-201ENST00000261769 ZNF861PO60384 105 aa9.17□□□□□ -0.94
CDH1-201ENST00000261769 A0A0C4DFX4 3053 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms