RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 PRR4Q16378 134 aa11.04□□□□□ -0.64
SLC6A8-201ENST00000253122 C22orf24Q9Y442 160 aa11.04□□□□□ -0.64
SLC6A8-201ENST00000253122 Q6ZVQ6 151 aa11.04□□□□□ -0.64
SLC6A8-201ENST00000253122 LINC01547P58512 204 aaPredicted RBP11.03□□□□□ -0.64
SLC6A8-201ENST00000253122 C6orf223Q8N319 242 aa11.03□□□□□ -0.64
SLC6A8-201ENST00000253122 PDE6GP18545 87 aa11.03□□□□□ -0.64
SLC6A8-201ENST00000253122 COX7BP24311 80 aa11.03□□□□□ -0.64
SLC6A8-201ENST00000253122 HIGD2BQ4VC39 106 aa11.03□□□□□ -0.64
SLC6A8-201ENST00000253122 LINC01006Q8NI28 216 aa11.03□□□□□ -0.64
SLC6A8-201ENST00000253122 CAMK2N2Q96S95 79 aa11.03□□□□□ -0.64
SLC6A8-201ENST00000253122 SERP1Q9Y6X1 66 aa11.02□□□□□ -0.65
SLC6A8-201ENST00000253122 ITPR3Q14573 2671 aa11.02□□□□□ -0.65
SLC6A8-201ENST00000253122 LINC00575Q6W349 94 aa11.01□□□□□ -0.65
SLC6A8-201ENST00000253122 FAM19A3Q7Z5A8 133 aa11□□□□□ -0.65
SLC6A8-201ENST00000253122 CYSRT1A8MQ03 144 aa11□□□□□ -0.65
SLC6A8-201ENST00000253122 NDUFC2-KCTD14E9PQ53 114 aa11□□□□□ -0.65
SLC6A8-201ENST00000253122 LINC00482Q8N8I6 264 aa11□□□□□ -0.65
SLC6A8-201ENST00000253122 C3orf84H3BNL1 204 aa11□□□□□ -0.65
SLC6A8-201ENST00000253122 CELSR2Q9HCU4 2923 aa11□□□□□ -0.65
SLC6A8-201ENST00000253122 TRAV10A0A0B4J240 114 aa10.99□□□□□ -0.65
SLC6A8-201ENST00000253122 MGAM2Q2M2H8 2515 aa10.99□□□□□ -0.65
SLC6A8-201ENST00000253122 TRBV10-3A0A0K0K1G6 114 aa10.99□□□□□ -0.65
SLC6A8-201ENST00000253122 KMT2BQ9UMN6 2715 aaPredicted RBP10.98□□□□□ -0.65
SLC6A8-201ENST00000253122 SMIM26A0A096LP01 95 aa10.98□□□□□ -0.65
SLC6A8-201ENST00000253122 COX17Q14061 63 aa10.98□□□□□ -0.65
SLC6A8-201ENST00000253122 Q8N9L7 120 aa10.98□□□□□ -0.65
SLC6A8-201ENST00000253122 APCP25054 2843 aa10.98□□□□□ -0.65
SLC6A8-201ENST00000253122 MIFP14174 115 aa10.97□□□□□ -0.65
SLC6A8-201ENST00000253122 NKAPP1Q8N9T2 125 aa10.97□□□□□ -0.65
SLC6A8-201ENST00000253122 BPY2O14599 106 aa10.97□□□□□ -0.65
SLC6A8-201ENST00000253122 NBEAL1Q6ZS30 2694 aa10.95□□□□□ -0.66
SLC6A8-201ENST00000253122 C10orf25Q5T742 122 aa10.94□□□□□ -0.66
SLC6A8-201ENST00000253122 Q6ZQT0 140 aa10.94□□□□□ -0.66
SLC6A8-201ENST00000253122 MUC7Q8TAX7 377 aa10.94□□□□□ -0.66
SLC6A8-201ENST00000253122 NOTCH1P46531 2555 aa10.94□□□□□ -0.66
SLC6A8-201ENST00000253122 ZNF73O43830 326 aaPredicted RBP10.94□□□□□ -0.66
SLC6A8-201ENST00000253122 A0A1B0GUV1 79 aa10.93□□□□□ -0.66
SLC6A8-201ENST00000253122 FUSP35637 526 aaKnown RBP eCLIP10.93□□□□□ -0.664e-7■■■□□ 15.8
SLC6A8-201ENST00000253122 TM2D3Q9BRN9 247 aa10.92□□□□□ -0.66
SLC6A8-201ENST00000253122 CELA1Q9UNI1 258 aa10.92□□□□□ -0.66
SLC6A8-201ENST00000253122 OBSCN-AS1Q96MR7 158 aa10.91□□□□□ -0.66
SLC6A8-201ENST00000253122 H3BQ85 93 aa10.91□□□□□ -0.66
SLC6A8-201ENST00000253122 LY6G6DO95868 133 aa10.91□□□□□ -0.66
SLC6A8-201ENST00000253122 IGKV2D-24A0A075B6R9 120 aa10.91□□□□□ -0.66
SLC6A8-201ENST00000253122 NDUFC1O43677 76 aa10.91□□□□□ -0.66
SLC6A8-201ENST00000253122 SMR3AQ99954 134 aa10.91□□□□□ -0.66
SLC6A8-201ENST00000253122 TRBV7-6A0A0J9YX20 115 aa10.9□□□□□ -0.66
SLC6A8-201ENST00000253122 M0R2N4 97 aa10.9□□□□□ -0.66
SLC6A8-201ENST00000253122 IGLV1-51P01701 117 aa10.9□□□□□ -0.66
SLC6A8-201ENST00000253122 SPATA3Q8NHX4 192 aa10.9□□□□□ -0.66
SLC6A8-201ENST00000253122 MAST4O15021 2626 aa10.9□□□□□ -0.66
SLC6A8-201ENST00000253122 NANOS2P60321 138 aaKnown RBP10.9□□□□□ -0.67
SLC6A8-201ENST00000253122 ITPR2Q14571 2701 aa10.89□□□□□ -0.67
SLC6A8-201ENST00000253122 OXTP01178 125 aa10.89□□□□□ -0.67
SLC6A8-201ENST00000253122 SPART-AS1P0CW21 52 aa10.89□□□□□ -0.67
SLC6A8-201ENST00000253122 TMEM254Q8TBM7 123 aa10.89□□□□□ -0.67
SLC6A8-201ENST00000253122 APOC4P55056 127 aa10.89□□□□□ -0.67
SLC6A8-201ENST00000253122 IL17DQ8TAD2 202 aa10.89□□□□□ -0.67
SLC6A8-201ENST00000253122 TENM4Q6N022 2769 aa10.88□□□□□ -0.67
SLC6A8-201ENST00000253122 GIG44P09565 113 aaPredicted RBP10.88□□□□□ -0.67
SLC6A8-201ENST00000253122 KRTAP1-1Q07627 177 aa10.88□□□□□ -0.67
SLC6A8-201ENST00000253122 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.88□□□□□ -0.67
SLC6A8-201ENST00000253122 LINC00336Q6ZUF6 198 aa10.87□□□□□ -0.67
SLC6A8-201ENST00000253122 PLAC8L1A1L4L8 177 aa10.87□□□□□ -0.67
SLC6A8-201ENST00000253122 H7BZZ5 65 aa10.87□□□□□ -0.67
SLC6A8-201ENST00000253122 PRO0628Q9UI54 55 aa10.87□□□□□ -0.67
SLC6A8-201ENST00000253122 LINC00474Q9P2X8 69 aa10.86□□□□□ -0.67
SLC6A8-201ENST00000253122 FAM30AQ9NZY2 134 aa10.85□□□□□ -0.67
SLC6A8-201ENST00000253122 LYRM9A8MSI8 78 aa10.85□□□□□ -0.67
SLC6A8-201ENST00000253122 CXCL6P80162 114 aa10.84□□□□□ -0.67
SLC6A8-201ENST00000253122 BAHCC1Q9P281 2608 aa10.83□□□□□ -0.68
SLC6A8-201ENST00000253122 COL6A5A8TX70 2615 aa10.83□□□□□ -0.68
SLC6A8-201ENST00000253122 INAFM1C9JVW0 142 aa10.82□□□□□ -0.68
SLC6A8-201ENST00000253122 ETDCA0A1B0GVM5 59 aa10.82□□□□□ -0.68
SLC6A8-201ENST00000253122 KIAA0087Q14695 138 aa10.81□□□□□ -0.68
SLC6A8-201ENST00000253122 LOC110117498A0A087WWA1 95 aa10.81□□□□□ -0.68
SLC6A8-201ENST00000253122 UBE2BP63146 152 aa10.81□□□□□ -0.68
SLC6A8-201ENST00000253122 ATP5EP56381 51 aaPredicted RBP10.81□□□□□ -0.68
SLC6A8-201ENST00000253122 A0A096LNI7 61 aa10.8□□□□□ -0.68
SLC6A8-201ENST00000253122 PRYO14603 147 aa10.8□□□□□ -0.68
SLC6A8-201ENST00000253122 Q5XG85 94 aa10.8□□□□□ -0.68
SLC6A8-201ENST00000253122 LELP1Q5T871 98 aa10.79□□□□□ -0.68
SLC6A8-201ENST00000253122 MXRA5Q9NR99 2828 aa10.79□□□□□ -0.68
SLC6A8-201ENST00000253122 M0R378 163 aa10.79□□□□□ -0.68
SLC6A8-201ENST00000253122 C16orf95Q9H693 158 aa10.79□□□□□ -0.68
SLC6A8-201ENST00000253122 C1orf195Q5TG92 126 aa10.78□□□□□ -0.68
SLC6A8-201ENST00000253122 CSNK1G2-AS1Q8NCQ2 148 aa10.78□□□□□ -0.68
SLC6A8-201ENST00000253122 HIGD2AQ9BW72 106 aa10.78□□□□□ -0.68
SLC6A8-201ENST00000253122 KLKP1Q107X0 134 aa10.77□□□□□ -0.68
SLC6A8-201ENST00000253122 LINC00167Q96N53 147 aa10.77□□□□□ -0.69
SLC6A8-201ENST00000253122 NIPBLQ6KC79 2804 aaeCLIP10.76□□□□□ -0.694e-8■□□□□ 10.9
SLC6A8-201ENST00000253122 RPL37AP8A6NKH3 93 aa10.76□□□□□ -0.69
SLC6A8-201ENST00000253122 BCE1O60756 84 aa10.76□□□□□ -0.69
SLC6A8-201ENST00000253122 C9orf66Q5T8R8 295 aa10.76□□□□□ -0.69
SLC6A8-201ENST00000253122 C6orf48Q9UBA6 75 aa10.76□□□□□ -0.69
SLC6A8-201ENST00000253122 HIVEP1P15822 2718 aa10.76□□□□□ -0.69
SLC6A8-201ENST00000253122 A0A0J9YWU9 116 aa10.75□□□□□ -0.69
SLC6A8-201ENST00000253122 V9GYY9 64 aa10.74□□□□□ -0.69
SLC6A8-201ENST00000253122 SETXQ7Z333 2677 aaKnown RBP10.74□□□□□ -0.69
SLC6A8-201ENST00000253122 Q8NDZ9 215 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms