RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 UBE2WQ96B02 151 aa11.49□□□□□ -0.57
HOXC6-201ENST00000243108 LINC00158P58513 81 aa11.48□□□□□ -0.57
HOXC6-201ENST00000243108 CFAP161Q6P656 301 aa11.48□□□□□ -0.57
HOXC6-201ENST00000243108 C2orf82Q6UX34 121 aa11.48□□□□□ -0.57
HOXC6-201ENST00000243108 CKS1BP61024 79 aa11.47□□□□□ -0.57
HOXC6-201ENST00000243108 KRTAP26-1Q6PEX3 210 aa11.47□□□□□ -0.57
HOXC6-201ENST00000243108 H3BMG7 143 aa11.46□□□□□ -0.57
HOXC6-201ENST00000243108 H7C2G1 150 aa11.46□□□□□ -0.57
HOXC6-201ENST00000243108 TRBV20-1A0A075B6N2 111 aa11.46□□□□□ -0.58
HOXC6-201ENST00000243108 TRBV30A0A0K0K1B3 111 aa11.46□□□□□ -0.58
HOXC6-201ENST00000243108 A0A087WTM6 91 aa11.45□□□□□ -0.58
HOXC6-201ENST00000243108 PFN2P35080 140 aa11.45□□□□□ -0.58
HOXC6-201ENST00000243108 RPL13AP40429 203 aaKnown RBP11.45□□□□□ -0.58
HOXC6-201ENST00000243108 Q1RN00 199 aa11.45□□□□□ -0.58
HOXC6-201ENST00000243108 PSMB2P49721 201 aa11.44□□□□□ -0.58
HOXC6-201ENST00000243108 SPAG11BQ08648 103 aa11.44□□□□□ -0.58
HOXC6-201ENST00000243108 TCL1BO95988 128 aa11.43□□□□□ -0.58
HOXC6-201ENST00000243108 COX17Q14061 63 aa11.43□□□□□ -0.58
HOXC6-201ENST00000243108 F8W1H4 67 aa11.43□□□□□ -0.58
HOXC6-201ENST00000243108 TRIAP1O43715 76 aa11.43□□□□□ -0.58
HOXC6-201ENST00000243108 PRO0461Q9UI25 63 aa11.43□□□□□ -0.58
HOXC6-201ENST00000243108 SCGB1C2P0DMR2 95 aa11.42□□□□□ -0.58
HOXC6-201ENST00000243108 SND1-IT1Q9HBX3 110 aa11.42□□□□□ -0.58
HOXC6-201ENST00000243108 FAT1Q14517 4588 aa11.42□□□□□ -0.58
HOXC6-201ENST00000243108 LRCOL1A6NCL2 159 aa11.4□□□□□ -0.58
HOXC6-201ENST00000243108 IGKV2-28A0A075B6P5 120 aa11.39□□□□□ -0.59
HOXC6-201ENST00000243108 IGKV2D-28P01615 120 aa11.39□□□□□ -0.59
HOXC6-201ENST00000243108 TRAV13-2A0A0B4J235 113 aa11.38□□□□□ -0.59
HOXC6-201ENST00000243108 KRTAP10-1P60331 282 aa11.38□□□□□ -0.59
HOXC6-201ENST00000243108 C10orf25Q5T742 122 aa11.38□□□□□ -0.59
HOXC6-201ENST00000243108 NTN5Q8WTR8 489 aaPredicted RBP11.38□□□□□ -0.59
HOXC6-201ENST00000243108 C1orf43Q9BWL3 253 aa11.38□□□□□ -0.59
HOXC6-201ENST00000243108 Q9HAA7 133 aa11.38□□□□□ -0.59
HOXC6-201ENST00000243108 GVQW2A0A096LPI5 108 aaPredicted RBP11.38□□□□□ -0.59
HOXC6-201ENST00000243108 UNQ6190/PRO20217Q6UXQ8 127 aa11.38□□□□□ -0.59
HOXC6-201ENST00000243108 Q8N1X5 172 aa11.38□□□□□ -0.59
HOXC6-201ENST00000243108 COX6CP09669 75 aa11.37□□□□□ -0.59
HOXC6-201ENST00000243108 WFDC2Q14508 124 aa11.37□□□□□ -0.59
HOXC6-201ENST00000243108 DNAH8Q96JB1 4490 aa11.36□□□□□ -0.59
HOXC6-201ENST00000243108 C9orf116Q5BN46 136 aaPredicted RBP11.36□□□□□ -0.59
HOXC6-201ENST00000243108 LINC00337Q8N6G1 96 aa11.36□□□□□ -0.59
HOXC6-201ENST00000243108 LINC00526Q96FQ7 95 aa11.36□□□□□ -0.59
HOXC6-201ENST00000243108 XGP55808 180 aa11.35□□□□□ -0.59
HOXC6-201ENST00000243108 C15orf56Q8N910 161 aa11.35□□□□□ -0.59
HOXC6-201ENST00000243108 ATXN8Q156A1 80 aa11.35□□□□□ -0.59
HOXC6-201ENST00000243108 OCIAD2Q56VL3 154 aa11.35□□□□□ -0.59
HOXC6-201ENST00000243108 MTURNQ8N3F0 131 aa11.35□□□□□ -0.59
HOXC6-201ENST00000243108 IGKV2D-24A0A075B6R9 120 aa11.34□□□□□ -0.59
HOXC6-201ENST00000243108 SMCPP49901 116 aaPredicted RBP11.34□□□□□ -0.59
HOXC6-201ENST00000243108 PSCAO43653 123 aa11.33□□□□□ -0.6
HOXC6-201ENST00000243108 ZNF561-AS1K7EIQ3 104 aa11.32□□□□□ -0.6
HOXC6-201ENST00000243108 NDUFC2O95298 119 aa11.32□□□□□ -0.6
HOXC6-201ENST00000243108 C2orf48Q96LS8 159 aa11.32□□□□□ -0.6
HOXC6-201ENST00000243108 C6orf48Q9UBA6 75 aa11.32□□□□□ -0.6
HOXC6-201ENST00000243108 F8WDY8 70 aa11.31□□□□□ -0.6
HOXC6-201ENST00000243108 RPL28P46779 137 aaKnown RBP11.31□□□□□ -0.6
HOXC6-201ENST00000243108 LINC01620Q4KN68 170 aa11.31□□□□□ -0.6
HOXC6-201ENST00000243108 HIGD2BQ4VC39 106 aa11.31□□□□□ -0.6
HOXC6-201ENST00000243108 LST1O00453 97 aa11.3□□□□□ -0.6
HOXC6-201ENST00000243108 Q8N814 137 aa11.3□□□□□ -0.6
HOXC6-201ENST00000243108 M0QXV9 152 aa11.29□□□□□ -0.6
HOXC6-201ENST00000243108 CLEC2BQ92478 149 aa11.29□□□□□ -0.6
HOXC6-201ENST00000243108 VPS13BQ7Z7G8 4022 aa11.29□□□□□ -0.6
HOXC6-201ENST00000243108 K7ERU9 68 aa11.29□□□□□ -0.6
HOXC6-201ENST00000243108 LINC01600Q96MT4 127 aa11.29□□□□□ -0.6
HOXC6-201ENST00000243108 CAMK2N2Q96S95 79 aa11.29□□□□□ -0.6
HOXC6-201ENST00000243108 C9JAW5 83 aa11.28□□□□□ -0.6
HOXC6-201ENST00000243108 ETDBQ3ZM63 59 aa11.28□□□□□ -0.6
HOXC6-201ENST00000243108 IGLV5-52A0A0A0MRZ9 124 aa11.27□□□□□ -0.61
HOXC6-201ENST00000243108 LECT2O14960 151 aa11.26□□□□□ -0.61
HOXC6-201ENST00000243108 SLC25A20O43772 301 aa11.26□□□□□ -0.61
HOXC6-201ENST00000243108 HAMPP81172 84 aa11.26□□□□□ -0.61
HOXC6-201ENST00000243108 SMIM11BQ8TCY0 68 aa11.26□□□□□ -0.61
HOXC6-201ENST00000243108 RMI2Q96E14 147 aa11.26□□□□□ -0.61
HOXC6-201ENST00000243108 Q6ZRU5 148 aa11.26□□□□□ -0.61
HOXC6-201ENST00000243108 SRRM2Q9UQ35 2752 aaKnown RBP11.25□□□□□ -0.61
HOXC6-201ENST00000243108 Q8NDZ9 215 aa11.25□□□□□ -0.61
HOXC6-201ENST00000243108 TRBV10-2A0A0K0K1G8 114 aa11.24□□□□□ -0.61
HOXC6-201ENST00000243108 OR13C6PQ8NH95 151 aa11.23□□□□□ -0.61
HOXC6-201ENST00000243108 FAM30AQ9NZY2 134 aa11.23□□□□□ -0.61
HOXC6-201ENST00000243108 PRR3P79522 188 aaKnown RBP11.23□□□□□ -0.61
HOXC6-201ENST00000243108 TEN1Q86WV5 123 aa11.23□□□□□ -0.61
HOXC6-201ENST00000243108 ANKRD29Q8N6D5 301 aa11.22□□□□□ -0.61
HOXC6-201ENST00000243108 EPM2AB3EWF7 344 aa11.21□□□□□ -0.61
HOXC6-201ENST00000243108 TRACP01848 142 aa11.21□□□□□ -0.61
HOXC6-201ENST00000243108 SMR3BP02814 79 aaPredicted RBP11.21□□□□□ -0.61
HOXC6-201ENST00000243108 TMEM126AQ9H061 195 aa11.21□□□□□ -0.61
HOXC6-201ENST00000243108 H3BT86 120 aa11.21□□□□□ -0.62
HOXC6-201ENST00000243108 SYCNQ0VAF6 134 aa11.21□□□□□ -0.62
HOXC6-201ENST00000243108 USP17L23D6RBM5 183 aa11.2□□□□□ -0.62
HOXC6-201ENST00000243108 NDUFC2-KCTD14E9PQ53 114 aa11.2□□□□□ -0.62
HOXC6-201ENST00000243108 H0YGX0 51 aa11.2□□□□□ -0.62
HOXC6-201ENST00000243108 FAM218AQ96MZ4 157 aa11.2□□□□□ -0.62
HOXC6-201ENST00000243108 MYCBP2O75592 4640 aa11.2□□□□□ -0.62
HOXC6-201ENST00000243108 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.19□□□□□ -0.62
HOXC6-201ENST00000243108 Q5VSD8 79 aa11.19□□□□□ -0.62
HOXC6-201ENST00000243108 NCR3O14931 201 aa11.18□□□□□ -0.62
HOXC6-201ENST00000243108 RNF151Q2KHN1 245 aa11.18□□□□□ -0.62
HOXC6-201ENST00000243108 CARD19Q96LW7 228 aa11.18□□□□□ -0.62
HOXC6-201ENST00000243108 XAGE1AQ9HD64 81 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 151.5 ms