RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 FAM218AQ96MZ4 157 aa15.46■□□□□ 0.07
MSX2-201ENST00000239243 PRR3P79522 188 aaKnown RBP15.45■□□□□ 0.06
MSX2-201ENST00000239243 RMI2Q96E14 147 aa15.45■□□□□ 0.06
MSX2-201ENST00000239243 Q6ZRU5 148 aa15.43■□□□□ 0.06
MSX2-201ENST00000239243 DNAL4O96015 105 aa15.42■□□□□ 0.06
MSX2-201ENST00000239243 S100A7L2Q5SY68 101 aa15.42■□□□□ 0.06
MSX2-201ENST00000239243 NCR3O14931 201 aa15.41■□□□□ 0.06
MSX2-201ENST00000239243 TEX49A0A1B0GTD5 131 aa15.4■□□□□ 0.06
MSX2-201ENST00000239243 Q8NDZ9 215 aa15.4■□□□□ 0.06
MSX2-201ENST00000239243 NDUFC2-KCTD14E9PQ53 114 aa15.39■□□□□ 0.05
MSX2-201ENST00000239243 A0A087WYN8 130 aa15.38■□□□□ 0.05
MSX2-201ENST00000239243 BAALC-AS2P0C853 105 aa15.38■□□□□ 0.05
MSX2-201ENST00000239243 SYCNQ0VAF6 134 aa15.38■□□□□ 0.05
MSX2-201ENST00000239243 NHLRC4P0CG21 123 aaPredicted RBP15.37■□□□□ 0.05
MSX2-201ENST00000239243 A0A1B0GX51 115 aa15.36■□□□□ 0.05
MSX2-201ENST00000239243 XAGE1AQ9HD64 81 aa15.36■□□□□ 0.05
MSX2-201ENST00000239243 LECT2O14960 151 aa15.34■□□□□ 0.05
MSX2-201ENST00000239243 IGLV6-57P01721 117 aa15.34■□□□□ 0.05
MSX2-201ENST00000239243 RPL18AQ02543 176 aaKnown RBP15.34■□□□□ 0.05
MSX2-201ENST00000239243 DNAH9Q9NYC9 4486 aa15.32■□□□□ 0.04
MSX2-201ENST00000239243 SNCGO76070 127 aa15.31■□□□□ 0.04
MSX2-201ENST00000239243 APLNQ9ULZ1 77 aa15.31■□□□□ 0.04
MSX2-201ENST00000239243 USP17L23D6RBM5 183 aa15.31■□□□□ 0.04
MSX2-201ENST00000239243 SIGMAR1Q99720 223 aa15.31■□□□□ 0.04
MSX2-201ENST00000239243 C6orf99Q4VX62 202 aa15.3■□□□□ 0.04
MSX2-201ENST00000239243 UBE2DNLQ8IWF7 75 aa15.29■□□□□ 0.04
MSX2-201ENST00000239243 STAB2Q8WWQ8 2551 aa15.28■□□□□ 0.04
MSX2-201ENST00000239243 CDIP1Q9H305 208 aa15.28■□□□□ 0.04
MSX2-201ENST00000239243 VPREB1P12018 145 aa15.28■□□□□ 0.04
MSX2-201ENST00000239243 GAGE2EQ4V326 116 aa15.27■□□□□ 0.04
MSX2-201ENST00000239243 Q6ZRP5 223 aa15.27■□□□□ 0.04
MSX2-201ENST00000239243 GAGE2DQ9UEU5 116 aa15.27■□□□□ 0.04
MSX2-201ENST00000239243 NUPR2A6NF83 97 aa15.26■□□□□ 0.03
MSX2-201ENST00000239243 TLX1NBP0CAT3 122 aa15.26■□□□□ 0.03
MSX2-201ENST00000239243 Q8N814 137 aa15.26■□□□□ 0.03
MSX2-201ENST00000239243 LINC00167Q96N53 147 aa15.26■□□□□ 0.03
MSX2-201ENST00000239243 ORMDL1Q9P0S3 153 aa15.26■□□□□ 0.03
MSX2-201ENST00000239243 COL7A1Q02388 2944 aa15.25■□□□□ 0.03
MSX2-201ENST00000239243 TRBV10-3A0A0K0K1G6 114 aa15.25■□□□□ 0.03
MSX2-201ENST00000239243 M0R378 163 aa15.25■□□□□ 0.03
MSX2-201ENST00000239243 TRAV23DV6A0A075B6W5 121 aa15.24■□□□□ 0.03
MSX2-201ENST00000239243 CASC10Q5T4H9 136 aa15.24■□□□□ 0.03
MSX2-201ENST00000239243 C22orf24Q9Y442 160 aa15.24■□□□□ 0.03
MSX2-201ENST00000239243 INAFM2P0DMQ5 153 aa15.24■□□□□ 0.03
MSX2-201ENST00000239243 FAM240AA0A1B0GVK7 77 aa15.23■□□□□ 0.03
MSX2-201ENST00000239243 LINC00575Q6W349 94 aa15.21■□□□□ 0.03
MSX2-201ENST00000239243 DIRC1Q969H9 104 aa15.21■□□□□ 0.03
MSX2-201ENST00000239243 PCP4P48539 62 aa15.2■□□□□ 0.02
MSX2-201ENST00000239243 SLPIP03973 132 aa15.19■□□□□ 0.02
MSX2-201ENST00000239243 C9orf129Q5T035 196 aaKnown RBP15.19■□□□□ 0.02
MSX2-201ENST00000239243 DNAH1Q9P2D7 4330 aa15.19■□□□□ 0.02
MSX2-201ENST00000239243 ZNF73O43830 326 aaPredicted RBP15.17■□□□□ 0.02
MSX2-201ENST00000239243 TRBV7-6A0A0J9YX20 115 aa15.17■□□□□ 0.02
MSX2-201ENST00000239243 ACYP1P07311 99 aa15.17■□□□□ 0.02
MSX2-201ENST00000239243 KRTAP1-5Q9BYS1 174 aa15.17■□□□□ 0.02
MSX2-201ENST00000239243 hADV29S1A0JD25 119 aa15.16■□□□□ 0.02
MSX2-201ENST00000239243 TMEM256-PLSCR3K7ERE1 68 aa15.16■□□□□ 0.02
MSX2-201ENST00000239243 PLA2G2DQ9UNK4 145 aa15.16■□□□□ 0.02
MSX2-201ENST00000239243 NKAPP1Q8N9T2 125 aa15.15■□□□□ 0.02
MSX2-201ENST00000239243 XGP55808 180 aa15.14■□□□□ 0.01
MSX2-201ENST00000239243 PSCAO43653 123 aa15.13■□□□□ 0.01
MSX2-201ENST00000239243 OBSCN-AS1Q96MR7 158 aa15.13■□□□□ 0.01
MSX2-201ENST00000239243 DYNC2H1Q8NCM8 4307 aaKnown RBP15.13■□□□□ 0.01
MSX2-201ENST00000239243 SCGB1A1P11684 91 aa15.13■□□□□ 0.01
MSX2-201ENST00000239243 TTC32Q5I0X7 151 aa15.13■□□□□ 0.01
MSX2-201ENST00000239243 COX7BP24311 80 aa15.12■□□□□ 0.01
MSX2-201ENST00000239243 LOC107984640A0A0U1RRK4 108 aa15.11■□□□□ 0.01
MSX2-201ENST00000239243 ELOF1P60002 83 aaKnown RBP15.11■□□□□ 0.01
MSX2-201ENST00000239243 H3BQ85 93 aa15.1■□□□□ 0.01
MSX2-201ENST00000239243 JMJD7-PLA2G4BH0Y9G9 81 aa15.09■□□□□ 0.01
MSX2-201ENST00000239243 MT-ATP8P03928 68 aa15.09■□□□□ 0.01
MSX2-201ENST00000239243 C14orf177Q52M58 125 aa15.08■□□□□ 0
MSX2-201ENST00000239243 IGLV5-37A0A075B6J1 123 aa15.08■□□□□ 0
MSX2-201ENST00000239243 SERTAD4-AS1Q5TG53 156 aa15.08■□□□□ 0
MSX2-201ENST00000239243 GHRHP01286 108 aa15.06■□□□□ 0
MSX2-201ENST00000239243 CNBPP62633 177 aaKnown RBP15.06■□□□□ 0
MSX2-201ENST00000239243 GAGE2BQ13066 116 aa15.06■□□□□ 0
MSX2-201ENST00000239243 C14orf132Q9NPU4 83 aa15.05■□□□□ 0
MSX2-201ENST00000239243 C7orf33Q8WU49 177 aa15.05■□□□□ -0
MSX2-201ENST00000239243 KCNQ1DNQ9H478 68 aa15.05■□□□□ -0
MSX2-201ENST00000239243 NBDYA0A0U1RRE5 68 aa15.04■□□□□ -0
MSX2-201ENST00000239243 GAGE2AQ6NT46 116 aa15.04■□□□□ -0
MSX2-201ENST00000239243 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP15.03■□□□□ -0
MSX2-201ENST00000239243 Q6ZQY7 126 aa15.02■□□□□ -0
MSX2-201ENST00000239243 LINC00528Q8N1L1 170 aa15.01□□□□□ -0.01
MSX2-201ENST00000239243 FAM168BA1KXE4 195 aa14.97□□□□□ -0.01
MSX2-201ENST00000239243 PRYO14603 147 aa14.97□□□□□ -0.01
MSX2-201ENST00000239243 C21orf62-AS1Q17RA5 79 aa14.96□□□□□ -0.02
MSX2-201ENST00000239243 KRTAP21-3Q3LHN1 58 aa14.96□□□□□ -0.02
MSX2-201ENST00000239243 IGLV1-50A0A075B6I6 118 aa14.95□□□□□ -0.02
MSX2-201ENST00000239243 C16orf90A8MZG2 172 aa14.95□□□□□ -0.02
MSX2-201ENST00000239243 CSMD3Q7Z407 3707 aa14.95□□□□□ -0.02
MSX2-201ENST00000239243 SDIM1Q6ZPB5 146 aa14.94□□□□□ -0.02
MSX2-201ENST00000239243 MRPL55Q7Z7F7 128 aaKnown RBP14.94□□□□□ -0.02
MSX2-201ENST00000239243 LAMTOR3Q9UHA4 124 aa14.94□□□□□ -0.02
MSX2-201ENST00000239243 LYSTQ99698 3801 aa14.94□□□□□ -0.02
MSX2-201ENST00000239243 A0A1B0GV72 72 aa14.93□□□□□ -0.02
MSX2-201ENST00000239243 CCKP06307 115 aa14.93□□□□□ -0.02
MSX2-201ENST00000239243 FAM19A5Q7Z5A7 132 aaPredicted RBP14.93□□□□□ -0.02
MSX2-201ENST00000239243 PKIGQ9Y2B9 76 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms