RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 ACANP16112 2415 aa9.53□□□□□ -0.88
SCNN1A-201ENST00000228916 H7BZZ5 65 aa9.53□□□□□ -0.88
SCNN1A-201ENST00000228916 PRO0255Q9UI72 69 aa9.53□□□□□ -0.88
SCNN1A-201ENST00000228916 Q6ZVQ6 151 aa9.51□□□□□ -0.89
SCNN1A-201ENST00000228916 A0A096LPF7 62 aa9.51□□□□□ -0.89
SCNN1A-201ENST00000228916 HRCT1Q6UXD1 115 aa9.51□□□□□ -0.89
SCNN1A-201ENST00000228916 ZNF843Q8N446 348 aa9.51□□□□□ -0.89
SCNN1A-201ENST00000228916 LAMTOR3Q9UHA4 124 aa9.51□□□□□ -0.89
SCNN1A-201ENST00000228916 C9orf66Q5T8R8 295 aa9.51□□□□□ -0.89
SCNN1A-201ENST00000228916 KLKP1Q107X0 134 aa9.5□□□□□ -0.89
SCNN1A-201ENST00000228916 MUC7Q8TAX7 377 aa9.5□□□□□ -0.89
SCNN1A-201ENST00000228916 IGLV10-54A0A075B6I4 117 aa9.5□□□□□ -0.89
SCNN1A-201ENST00000228916 IGLV6-57P01721 117 aa9.5□□□□□ -0.89
SCNN1A-201ENST00000228916 TENM4Q6N022 2769 aa9.49□□□□□ -0.89
SCNN1A-201ENST00000228916 PDE6GP18545 87 aa9.49□□□□□ -0.89
SCNN1A-201ENST00000228916 REG3AQ06141 175 aa9.49□□□□□ -0.89
SCNN1A-201ENST00000228916 PDZD2O15018 2839 aa9.49□□□□□ -0.89
SCNN1A-201ENST00000228916 VWFP04275 2813 aa9.49□□□□□ -0.89
SCNN1A-201ENST00000228916 CXCL6P80162 114 aa9.49□□□□□ -0.89
SCNN1A-201ENST00000228916 HAMPP81172 84 aa9.48□□□□□ -0.89
SCNN1A-201ENST00000228916 Q8N3U1 123 aa9.48□□□□□ -0.89
SCNN1A-201ENST00000228916 SERP1Q9Y6X1 66 aa9.48□□□□□ -0.89
SCNN1A-201ENST00000228916 TRAV10A0A0B4J240 114 aa9.48□□□□□ -0.89
SCNN1A-201ENST00000228916 H3BQ85 93 aa9.48□□□□□ -0.89
SCNN1A-201ENST00000228916 C10orf25Q5T742 122 aa9.48□□□□□ -0.89
SCNN1A-201ENST00000228916 X6R8D5 127 aa9.48□□□□□ -0.89
SCNN1A-201ENST00000228916 ANGP03950 147 aaKnown RBP9.47□□□□□ -0.89
SCNN1A-201ENST00000228916 Q6ZQY7 126 aa9.47□□□□□ -0.89
SCNN1A-201ENST00000228916 C16orf95Q9H693 158 aa9.47□□□□□ -0.89
SCNN1A-201ENST00000228916 SPATA3Q8NHX4 192 aa9.47□□□□□ -0.89
SCNN1A-201ENST00000228916 UNQ6190/PRO20217Q6UXQ8 127 aa9.47□□□□□ -0.89
SCNN1A-201ENST00000228916 A0A0J9YWU9 116 aa9.46□□□□□ -0.89
SCNN1A-201ENST00000228916 IGHV4-30-4P0DP06 118 aa9.46□□□□□ -0.89
SCNN1A-201ENST00000228916 KRTAP1-1Q07627 177 aa9.45□□□□□ -0.9
SCNN1A-201ENST00000228916 SPAG11BQ08648 103 aa9.45□□□□□ -0.9
SCNN1A-201ENST00000228916 ITPR2Q14571 2701 aa9.43□□□□□ -0.9
SCNN1A-201ENST00000228916 TRBV7-4A0A0J9YYF1 115 aa9.43□□□□□ -0.9
SCNN1A-201ENST00000228916 CYSRT1A8MQ03 144 aa9.42□□□□□ -0.9
SCNN1A-201ENST00000228916 RMI2Q96E14 147 aa9.42□□□□□ -0.9
SCNN1A-201ENST00000228916 SNURFQ9Y675 71 aa9.42□□□□□ -0.9
SCNN1A-201ENST00000228916 LYRM9A8MSI8 78 aa9.42□□□□□ -0.9
SCNN1A-201ENST00000228916 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.41□□□□□ -0.9
SCNN1A-201ENST00000228916 DIRC1Q969H9 104 aa9.41□□□□□ -0.9
SCNN1A-201ENST00000228916 GVQW2A0A096LPI5 108 aaPredicted RBP9.4□□□□□ -0.9
SCNN1A-201ENST00000228916 F8WEM9 126 aa9.4□□□□□ -0.91
SCNN1A-201ENST00000228916 DEFB4AO15263 64 aa9.39□□□□□ -0.91
SCNN1A-201ENST00000228916 KRTAP10-3P60369 221 aa9.39□□□□□ -0.91
SCNN1A-201ENST00000228916 TM2D3Q9BRN9 247 aa9.38□□□□□ -0.91
SCNN1A-201ENST00000228916 TRBV7-6A0A0J9YX20 115 aa9.38□□□□□ -0.91
SCNN1A-201ENST00000228916 NDUFC1O43677 76 aa9.38□□□□□ -0.91
SCNN1A-201ENST00000228916 ZNF73O43830 326 aaPredicted RBP9.37□□□□□ -0.91
SCNN1A-201ENST00000228916 PRR34Q9NV39 138 aa9.37□□□□□ -0.91
SCNN1A-201ENST00000228916 COX7BP24311 80 aa9.37□□□□□ -0.91
SCNN1A-201ENST00000228916 ELOF1P60002 83 aaKnown RBP9.37□□□□□ -0.91
SCNN1A-201ENST00000228916 MRAPQ8TCY5 172 aa9.37□□□□□ -0.91
SCNN1A-201ENST00000228916 SCXQ7RTU7 201 aa9.36□□□□□ -0.91
SCNN1A-201ENST00000228916 C6orf48Q9UBA6 75 aa9.36□□□□□ -0.91
SCNN1A-201ENST00000228916 SMIM26A0A096LP01 95 aa9.36□□□□□ -0.91
SCNN1A-201ENST00000228916 FP248Q71RG6 208 aaPredicted RBP9.35□□□□□ -0.91
SCNN1A-201ENST00000228916 LELP1Q5T871 98 aa9.35□□□□□ -0.91
SCNN1A-201ENST00000228916 XAGE1AQ9HD64 81 aa9.35□□□□□ -0.91
SCNN1A-201ENST00000228916 DEFB135Q30KP9 77 aa9.34□□□□□ -0.92
SCNN1A-201ENST00000228916 MIFP14174 115 aa9.33□□□□□ -0.92
SCNN1A-201ENST00000228916 ATP5EP56381 51 aaPredicted RBP9.33□□□□□ -0.92
SCNN1A-201ENST00000228916 DAD1P61803 113 aa9.33□□□□□ -0.92
SCNN1A-201ENST00000228916 NREPQ16612 68 aa9.33□□□□□ -0.92
SCNN1A-201ENST00000228916 KLK12Q9UKR0 248 aa9.33□□□□□ -0.92
SCNN1A-201ENST00000228916 LINC00336Q6ZUF6 198 aa9.33□□□□□ -0.92
SCNN1A-201ENST00000228916 ERC2-IT1O76042 136 aa9.32□□□□□ -0.92
SCNN1A-201ENST00000228916 TENM1Q9UKZ4 2725 aa9.32□□□□□ -0.92
SCNN1A-201ENST00000228916 TRRAPQ9Y4A5 3859 aa9.32□□□□□ -0.92
SCNN1A-201ENST00000228916 BPY2O14599 106 aa9.31□□□□□ -0.92
SCNN1A-201ENST00000228916 VPREB1P12018 145 aa9.31□□□□□ -0.92
SCNN1A-201ENST00000228916 PRO0628Q9UI54 55 aa9.31□□□□□ -0.92
SCNN1A-201ENST00000228916 TMEM254Q8TBM7 123 aa9.31□□□□□ -0.92
SCNN1A-201ENST00000228916 CELA1Q9UNI1 258 aa9.3□□□□□ -0.92
SCNN1A-201ENST00000228916 SMR3AQ99954 134 aa9.29□□□□□ -0.92
SCNN1A-201ENST00000228916 HIVEP2P31629 2446 aa9.29□□□□□ -0.92
SCNN1A-201ENST00000228916 LINC00528Q8N1L1 170 aa9.29□□□□□ -0.92
SCNN1A-201ENST00000228916 IGKV4-1P06312 121 aa9.28□□□□□ -0.92
SCNN1A-201ENST00000228916 M0R378 163 aa9.27□□□□□ -0.92
SCNN1A-201ENST00000228916 Q8NAQ8 132 aa9.27□□□□□ -0.93
SCNN1A-201ENST00000228916 HIVEP1P15822 2718 aa9.27□□□□□ -0.93
SCNN1A-201ENST00000228916 OCR1Q9BZK8 76 aa9.27□□□□□ -0.93
SCNN1A-201ENST00000228916 UNC79Q9P2D8 2635 aa9.26□□□□□ -0.93
SCNN1A-201ENST00000228916 LINC00474Q9P2X8 69 aa9.26□□□□□ -0.93
SCNN1A-201ENST00000228916 Q8N9L7 120 aa9.26□□□□□ -0.93
SCNN1A-201ENST00000228916 EGFEM1PQ0D2K5 195 aa9.25□□□□□ -0.93
SCNN1A-201ENST00000228916 HTN3P15516 51 aa9.25□□□□□ -0.93
SCNN1A-201ENST00000228916 A0A0U1RQV1 116 aa9.24□□□□□ -0.93
SCNN1A-201ENST00000228916 APOC4P55056 127 aa9.24□□□□□ -0.93
SCNN1A-201ENST00000228916 CAMK2N2Q96S95 79 aa9.24□□□□□ -0.93
SCNN1A-201ENST00000228916 SPART-AS1P0CW21 52 aa9.23□□□□□ -0.93
SCNN1A-201ENST00000228916 HIGD2BQ4VC39 106 aa9.23□□□□□ -0.93
SCNN1A-201ENST00000228916 FASNP49327 2511 aaKnown RBP9.22□□□□□ -0.93
SCNN1A-201ENST00000228916 PRYO14603 147 aa9.22□□□□□ -0.93
SCNN1A-201ENST00000228916 KRTAP26-1Q6PEX3 210 aa9.22□□□□□ -0.93
SCNN1A-201ENST00000228916 OTOGQ6ZRI0 2925 aa9.21□□□□□ -0.93
SCNN1A-201ENST00000228916 Q6ZRU5 148 aa9.21□□□□□ -0.93
SCNN1A-201ENST00000228916 HELZ2Q9BYK8 2649 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms