RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 C1orf43Q9BWL3 253 aa5.33□□□□□ -1.56
HMGXB4-201ENST00000216106 COL7A1Q02388 2944 aa5.32□□□□□ -1.56
HMGXB4-201ENST00000216106 IGKV2D-24A0A075B6R9 120 aa5.32□□□□□ -1.56
HMGXB4-201ENST00000216106 C15orf56Q8N910 161 aa5.32□□□□□ -1.56
HMGXB4-201ENST00000216106 TMEM126AQ9H061 195 aa5.32□□□□□ -1.56
HMGXB4-201ENST00000216106 XAGE1AQ9HD64 81 aa5.32□□□□□ -1.56
HMGXB4-201ENST00000216106 TRAV10A0A0B4J240 114 aa5.32□□□□□ -1.56
HMGXB4-201ENST00000216106 CAMK2N2Q96S95 79 aa5.32□□□□□ -1.56
HMGXB4-201ENST00000216106 LYSTQ99698 3801 aa5.32□□□□□ -1.56
HMGXB4-201ENST00000216106 GVQW2A0A096LPI5 108 aaPredicted RBP5.32□□□□□ -1.56
HMGXB4-201ENST00000216106 SLPIP03973 132 aa5.32□□□□□ -1.56
HMGXB4-201ENST00000216106 S100A7L2Q5SY68 101 aa5.32□□□□□ -1.56
HMGXB4-201ENST00000216106 RPL18AQ02543 176 aaKnown RBP5.31□□□□□ -1.56
HMGXB4-201ENST00000216106 MUC7Q8TAX7 377 aa5.31□□□□□ -1.56
HMGXB4-201ENST00000216106 Q6ZRU5 148 aa5.3□□□□□ -1.56
HMGXB4-201ENST00000216106 C15orf53Q8NAA6 179 aa5.3□□□□□ -1.56
HMGXB4-201ENST00000216106 SCGB1A1P11684 91 aa5.3□□□□□ -1.56
HMGXB4-201ENST00000216106 C6orf99Q4VX62 202 aa5.3□□□□□ -1.56
HMGXB4-201ENST00000216106 LINC00588Q9Y4M8 146 aa5.3□□□□□ -1.56
HMGXB4-201ENST00000216106 DNAH10OSP0CZ25 163 aa5.3□□□□□ -1.56
HMGXB4-201ENST00000216106 C9orf129Q5T035 196 aaKnown RBP5.3□□□□□ -1.56
HMGXB4-201ENST00000216106 STAB2Q8WWQ8 2551 aa5.29□□□□□ -1.56
HMGXB4-201ENST00000216106 FAM240AA0A1B0GVK7 77 aa5.29□□□□□ -1.56
HMGXB4-201ENST00000216106 A0A1B0GV72 72 aa5.28□□□□□ -1.56
HMGXB4-201ENST00000216106 SNCGO76070 127 aa5.28□□□□□ -1.56
HMGXB4-201ENST00000216106 TTC32Q5I0X7 151 aa5.28□□□□□ -1.56
HMGXB4-201ENST00000216106 Q8N814 137 aa5.28□□□□□ -1.56
HMGXB4-201ENST00000216106 MDFIQ99750 246 aa5.28□□□□□ -1.56
HMGXB4-201ENST00000216106 ORMDL1Q9P0S3 153 aa5.28□□□□□ -1.56
HMGXB4-201ENST00000216106 IGLV6-57P01721 117 aa5.27□□□□□ -1.57
HMGXB4-201ENST00000216106 GAGE2EQ4V326 116 aa5.27□□□□□ -1.57
HMGXB4-201ENST00000216106 GAGE2DQ9UEU5 116 aa5.27□□□□□ -1.57
HMGXB4-201ENST00000216106 TRBV10-3A0A0K0K1G6 114 aa5.27□□□□□ -1.57
HMGXB4-201ENST00000216106 INAFM2P0DMQ5 153 aa5.27□□□□□ -1.57
HMGXB4-201ENST00000216106 C2orf48Q96LS8 159 aa5.27□□□□□ -1.57
HMGXB4-201ENST00000216106 C14orf132Q9NPU4 83 aa5.27□□□□□ -1.57
HMGXB4-201ENST00000216106 NDUFC2-KCTD14E9PQ53 114 aa5.26□□□□□ -1.57
HMGXB4-201ENST00000216106 DNAH1Q9P2D7 4330 aa5.26□□□□□ -1.57
HMGXB4-201ENST00000216106 GAGE2AQ6NT46 116 aa5.26□□□□□ -1.57
HMGXB4-201ENST00000216106 Q6ZRP5 223 aa5.26□□□□□ -1.57
HMGXB4-201ENST00000216106 A0A1B0GX51 115 aa5.26□□□□□ -1.57
HMGXB4-201ENST00000216106 CASC10Q5T4H9 136 aa5.26□□□□□ -1.57
HMGXB4-201ENST00000216106 LINC00167Q96N53 147 aa5.26□□□□□ -1.57
HMGXB4-201ENST00000216106 VPREB1P12018 145 aa5.25□□□□□ -1.57
HMGXB4-201ENST00000216106 SYCNQ0VAF6 134 aa5.25□□□□□ -1.57
HMGXB4-201ENST00000216106 TRAV23DV6A0A075B6W5 121 aa5.25□□□□□ -1.57
HMGXB4-201ENST00000216106 ACYP1P07311 99 aa5.25□□□□□ -1.57
HMGXB4-201ENST00000216106 LINC00575Q6W349 94 aa5.25□□□□□ -1.57
HMGXB4-201ENST00000216106 SMCR5Q8TEV8 140 aa5.25□□□□□ -1.57
HMGXB4-201ENST00000216106 DNAH9Q9NYC9 4486 aa5.25□□□□□ -1.57
HMGXB4-201ENST00000216106 OBSCN-AS1Q96MR7 158 aa5.24□□□□□ -1.57
HMGXB4-201ENST00000216106 CSMD3Q7Z407 3707 aa5.24□□□□□ -1.57
HMGXB4-201ENST00000216106 GAGE2BQ13066 116 aa5.24□□□□□ -1.57
HMGXB4-201ENST00000216106 hADV29S1A0JD25 119 aa5.23□□□□□ -1.57
HMGXB4-201ENST00000216106 DIRC1Q969H9 104 aa5.23□□□□□ -1.57
HMGXB4-201ENST00000216106 USP17L23D6RBM5 183 aa5.23□□□□□ -1.57
HMGXB4-201ENST00000216106 TMEM256-PLSCR3K7ERE1 68 aa5.23□□□□□ -1.57
HMGXB4-201ENST00000216106 ZNF73O43830 326 aaPredicted RBP5.23□□□□□ -1.57
HMGXB4-201ENST00000216106 DNAH10Q8IVF4 4471 aa5.22□□□□□ -1.57
HMGXB4-201ENST00000216106 UPK3BQ9BT76 320 aa5.22□□□□□ -1.57
HMGXB4-201ENST00000216106 DNAH7Q8WXX0 4024 aa5.22□□□□□ -1.57
HMGXB4-201ENST00000216106 F8WDY8 70 aa5.22□□□□□ -1.57
HMGXB4-201ENST00000216106 M0R378 163 aa5.22□□□□□ -1.57
HMGXB4-201ENST00000216106 TENM2Q9NT68 2774 aa5.22□□□□□ -1.57
HMGXB4-201ENST00000216106 Q6ZQY7 126 aa5.21□□□□□ -1.58
HMGXB4-201ENST00000216106 RMI2Q96E14 147 aa5.2□□□□□ -1.58
HMGXB4-201ENST00000216106 SERTAD4-AS1Q5TG53 156 aa5.2□□□□□ -1.58
HMGXB4-201ENST00000216106 JMJD7-PLA2G4BH0Y9G9 81 aa5.2□□□□□ -1.58
HMGXB4-201ENST00000216106 COX7BP24311 80 aa5.2□□□□□ -1.58
HMGXB4-201ENST00000216106 ELOF1P60002 83 aaKnown RBP5.2□□□□□ -1.58
HMGXB4-201ENST00000216106 Q6Q795 121 aa5.2□□□□□ -1.58
HMGXB4-201ENST00000216106 SDIM1Q6ZPB5 146 aa5.2□□□□□ -1.58
HMGXB4-201ENST00000216106 KRTAP1-5Q9BYS1 174 aa5.2□□□□□ -1.58
HMGXB4-201ENST00000216106 LINC00643Q86TS7 51 aa5.2□□□□□ -1.58
HMGXB4-201ENST00000216106 NKAPP1Q8N9T2 125 aa5.19□□□□□ -1.58
HMGXB4-201ENST00000216106 B9D2Q9BPU9 175 aa5.19□□□□□ -1.58
HMGXB4-201ENST00000216106 LINC00846Q9NV44 126 aa5.19□□□□□ -1.58
HMGXB4-201ENST00000216106 TRBV7-7A0A0K0K1E9 115 aa5.19□□□□□ -1.58
HMGXB4-201ENST00000216106 LAMTOR3Q9UHA4 124 aa5.19□□□□□ -1.58
HMGXB4-201ENST00000216106 FAM168BA1KXE4 195 aa5.18□□□□□ -1.58
HMGXB4-201ENST00000216106 TLX1NBP0CAT3 122 aa5.18□□□□□ -1.58
HMGXB4-201ENST00000216106 UBE2DNLQ8IWF7 75 aa5.18□□□□□ -1.58
HMGXB4-201ENST00000216106 ANAPC13Q9BS18 74 aa5.18□□□□□ -1.58
HMGXB4-201ENST00000216106 CCKP06307 115 aa5.18□□□□□ -1.58
HMGXB4-201ENST00000216106 NDUFV3P56181 108 aaKnown RBP5.18□□□□□ -1.58
HMGXB4-201ENST00000216106 C7orf33Q8WU49 177 aa5.17□□□□□ -1.58
HMGXB4-201ENST00000216106 TRBV7-6A0A0J9YX20 115 aa5.17□□□□□ -1.58
HMGXB4-201ENST00000216106 APLNQ9ULZ1 77 aa5.17□□□□□ -1.58
HMGXB4-201ENST00000216106 PLECQ15149 4684 aaKnown RBP5.16□□□□□ -1.58
HMGXB4-201ENST00000216106 RBM3P98179 157 aaKnown RBP5.16□□□□□ -1.58
HMGXB4-201ENST00000216106 LINC00528Q8N1L1 170 aa5.16□□□□□ -1.58
HMGXB4-201ENST00000216106 DYNC2H1Q8NCM8 4307 aaKnown RBP5.16□□□□□ -1.58
HMGXB4-201ENST00000216106 RPL37AP8A6NKH3 93 aa5.16□□□□□ -1.58
HMGXB4-201ENST00000216106 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.16□□□□□ -1.58
HMGXB4-201ENST00000216106 PRKDCP78527 4128 aaKnown RBP5.16□□□□□ -1.58
HMGXB4-201ENST00000216106 NHLRC4P0CG21 123 aaPredicted RBP5.15□□□□□ -1.58
HMGXB4-201ENST00000216106 PSCAO43653 123 aa5.15□□□□□ -1.58
HMGXB4-201ENST00000216106 KCNQ1DNQ9H478 68 aa5.15□□□□□ -1.58
HMGXB4-201ENST00000216106 FAM19A5Q7Z5A7 132 aaPredicted RBP5.15□□□□□ -1.59
HMGXB4-201ENST00000216106 KRTAP7-1Q8IUC3 87 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms