RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 Q8IZM0 81 aa14.78□□□□□ -0.04
HOXC8-201ENST00000040584 H0YGX0 51 aa14.77□□□□□ -0.05
HOXC8-201ENST00000040584 GAGE2BQ13066 116 aa14.77□□□□□ -0.05
HOXC8-201ENST00000040584 GAGE2EQ4V326 116 aa14.77□□□□□ -0.05
HOXC8-201ENST00000040584 GAGE2DQ9UEU5 116 aa14.77□□□□□ -0.05
HOXC8-201ENST00000040584 DNAH1Q9P2D7 4330 aa14.76□□□□□ -0.05
HOXC8-201ENST00000040584 CD164L2Q6UWJ8 174 aa14.76□□□□□ -0.05
HOXC8-201ENST00000040584 BAALC-AS2P0C853 105 aa14.74□□□□□ -0.05
HOXC8-201ENST00000040584 CASC10Q5T4H9 136 aa14.74□□□□□ -0.05
HOXC8-201ENST00000040584 IGKV2-28A0A075B6P5 120 aa14.74□□□□□ -0.05
HOXC8-201ENST00000040584 IGKV2D-28P01615 120 aa14.74□□□□□ -0.05
HOXC8-201ENST00000040584 LINC00337Q8N6G1 96 aa14.73□□□□□ -0.05
HOXC8-201ENST00000040584 Q9HAA7 133 aa14.72□□□□□ -0.05
HOXC8-201ENST00000040584 CXCL5P42830 114 aa14.72□□□□□ -0.05
HOXC8-201ENST00000040584 VPS13DQ5THJ4 4388 aa14.71□□□□□ -0.06
HOXC8-201ENST00000040584 KRTAP1-5Q9BYS1 174 aa14.7□□□□□ -0.06
HOXC8-201ENST00000040584 INAFM2P0DMQ5 153 aa14.69□□□□□ -0.06
HOXC8-201ENST00000040584 PFN2P35080 140 aa14.69□□□□□ -0.06
HOXC8-201ENST00000040584 COX17Q14061 63 aa14.69□□□□□ -0.06
HOXC8-201ENST00000040584 C3orf84H3BNL1 204 aa14.69□□□□□ -0.06
HOXC8-201ENST00000040584 KRTAP26-1Q6PEX3 210 aa14.68□□□□□ -0.06
HOXC8-201ENST00000040584 SMIM11BQ8TCY0 68 aa14.68□□□□□ -0.06
HOXC8-201ENST00000040584 IGKV2D-24A0A075B6R9 120 aa14.67□□□□□ -0.06
HOXC8-201ENST00000040584 C1orf43Q9BWL3 253 aa14.67□□□□□ -0.06
HOXC8-201ENST00000040584 DNAL4O96015 105 aa14.67□□□□□ -0.06
HOXC8-201ENST00000040584 FAM218AQ96MZ4 157 aa14.67□□□□□ -0.06
HOXC8-201ENST00000040584 TTC32Q5I0X7 151 aa14.66□□□□□ -0.06
HOXC8-201ENST00000040584 ANAPC13Q9BS18 74 aa14.66□□□□□ -0.06
HOXC8-201ENST00000040584 MALP21145 153 aa14.65□□□□□ -0.06
HOXC8-201ENST00000040584 CFAP161Q6P656 301 aa14.65□□□□□ -0.06
HOXC8-201ENST00000040584 NBDYA0A0U1RRE5 68 aa14.63□□□□□ -0.07
HOXC8-201ENST00000040584 NDUFC2O95298 119 aa14.63□□□□□ -0.07
HOXC8-201ENST00000040584 OR13C6PQ8NH95 151 aa14.61□□□□□ -0.07
HOXC8-201ENST00000040584 IMUPQ9GZP8 106 aa14.61□□□□□ -0.07
HOXC8-201ENST00000040584 LY6G6CO95867 125 aa14.6□□□□□ -0.07
HOXC8-201ENST00000040584 NDUFV3P56181 108 aaKnown RBP14.6□□□□□ -0.07
HOXC8-201ENST00000040584 KIAA0087Q14695 138 aa14.6□□□□□ -0.07
HOXC8-201ENST00000040584 TRBV7-7A0A0K0K1E9 115 aa14.59□□□□□ -0.07
HOXC8-201ENST00000040584 A0A1B0GX51 115 aa14.59□□□□□ -0.07
HOXC8-201ENST00000040584 M0R2N4 97 aa14.59□□□□□ -0.07
HOXC8-201ENST00000040584 RMI2Q96E14 147 aa14.59□□□□□ -0.07
HOXC8-201ENST00000040584 C22orf24Q9Y442 160 aa14.59□□□□□ -0.07
HOXC8-201ENST00000040584 LINC00643Q86TS7 51 aa14.57□□□□□ -0.08
HOXC8-201ENST00000040584 LINC00476Q8WZB0 136 aa14.57□□□□□ -0.08
HOXC8-201ENST00000040584 SDIM1Q6ZPB5 146 aa14.56□□□□□ -0.08
HOXC8-201ENST00000040584 KMT2AQ03164 3969 aa14.56□□□□□ -0.08
HOXC8-201ENST00000040584 A0A087WYN8 130 aa14.55□□□□□ -0.08
HOXC8-201ENST00000040584 TMEM126AQ9H061 195 aa14.55□□□□□ -0.08
HOXC8-201ENST00000040584 DNAH10Q8IVF4 4471 aa14.53□□□□□ -0.08
HOXC8-201ENST00000040584 LINC00526Q96FQ7 95 aa14.53□□□□□ -0.08
HOXC8-201ENST00000040584 C15orf56Q8N910 161 aa14.52□□□□□ -0.08
HOXC8-201ENST00000040584 OBSCN-AS1Q96MR7 158 aa14.52□□□□□ -0.08
HOXC8-201ENST00000040584 ALMS1Q8TCU4 4167 aa14.52□□□□□ -0.08
HOXC8-201ENST00000040584 LECT2O14960 151 aa14.52□□□□□ -0.09
HOXC8-201ENST00000040584 SPAG11BQ08648 103 aa14.52□□□□□ -0.09
HOXC8-201ENST00000040584 HIGD2BQ4VC39 106 aa14.51□□□□□ -0.09
HOXC8-201ENST00000040584 ORMDL1Q9P0S3 153 aa14.51□□□□□ -0.09
HOXC8-201ENST00000040584 C6orf223Q8N319 242 aa14.5□□□□□ -0.09
HOXC8-201ENST00000040584 Q6ZR54 194 aa14.49□□□□□ -0.09
HOXC8-201ENST00000040584 LINC00167Q96N53 147 aa14.49□□□□□ -0.09
HOXC8-201ENST00000040584 PSCAO43653 123 aa14.48□□□□□ -0.09
HOXC8-201ENST00000040584 USP17L23D6RBM5 183 aa14.47□□□□□ -0.09
HOXC8-201ENST00000040584 GAGE2AQ6NT46 116 aa14.47□□□□□ -0.09
HOXC8-201ENST00000040584 ZNF561-AS1K7EIQ3 104 aa14.46□□□□□ -0.09
HOXC8-201ENST00000040584 GVQW2A0A096LPI5 108 aaPredicted RBP14.46□□□□□ -0.1
HOXC8-201ENST00000040584 Q6ZRN7 208 aaPredicted RBP14.44□□□□□ -0.1
HOXC8-201ENST00000040584 DNAH6Q9C0G6 4158 aa14.44□□□□□ -0.1
HOXC8-201ENST00000040584 C10orf25Q5T742 122 aa14.44□□□□□ -0.1
HOXC8-201ENST00000040584 UNQ6190/PRO20217Q6UXQ8 127 aa14.44□□□□□ -0.1
HOXC8-201ENST00000040584 JMJD7-PLA2G4BH0Y9G9 81 aa14.43□□□□□ -0.1
HOXC8-201ENST00000040584 TMEM256-PLSCR3K7ERE1 68 aa14.43□□□□□ -0.1
HOXC8-201ENST00000040584 Q8N814 137 aa14.43□□□□□ -0.1
HOXC8-201ENST00000040584 SMCR5Q8TEV8 140 aa14.42□□□□□ -0.1
HOXC8-201ENST00000040584 S100A7L2Q5SY68 101 aa14.41□□□□□ -0.1
HOXC8-201ENST00000040584 C2orf48Q96LS8 159 aa14.41□□□□□ -0.1
HOXC8-201ENST00000040584 DNAH2Q9P225 4427 aa14.4□□□□□ -0.1
HOXC8-201ENST00000040584 CAMK2N2Q96S95 79 aa14.4□□□□□ -0.1
HOXC8-201ENST00000040584 PRR3P79522 188 aaKnown RBP14.39□□□□□ -0.11
HOXC8-201ENST00000040584 C9orf116Q5BN46 136 aaPredicted RBP14.39□□□□□ -0.11
HOXC8-201ENST00000040584 C14orf132Q9NPU4 83 aa14.39□□□□□ -0.11
HOXC8-201ENST00000040584 HYDINQ4G0P3 5121 aa14.38□□□□□ -0.11
HOXC8-201ENST00000040584 F8WDY8 70 aa14.38□□□□□ -0.11
HOXC8-201ENST00000040584 H3BQ85 93 aa14.37□□□□□ -0.11
HOXC8-201ENST00000040584 C1orf134Q5TEV5 83 aa14.37□□□□□ -0.11
HOXC8-201ENST00000040584 Q6ZRU5 148 aa14.37□□□□□ -0.11
HOXC8-201ENST00000040584 C6orf48Q9UBA6 75 aa14.36□□□□□ -0.11
HOXC8-201ENST00000040584 LRCOL1A6NCL2 159 aa14.35□□□□□ -0.11
HOXC8-201ENST00000040584 SLPIP03973 132 aa14.35□□□□□ -0.11
HOXC8-201ENST00000040584 CCKP06307 115 aa14.34□□□□□ -0.11
HOXC8-201ENST00000040584 SYCNQ0VAF6 134 aa14.34□□□□□ -0.11
HOXC8-201ENST00000040584 NCR3O14931 201 aa14.33□□□□□ -0.11
HOXC8-201ENST00000040584 C6orf99Q4VX62 202 aa14.33□□□□□ -0.11
HOXC8-201ENST00000040584 C9orf129Q5T035 196 aaKnown RBP14.33□□□□□ -0.11
HOXC8-201ENST00000040584 LINC00575Q6W349 94 aa14.33□□□□□ -0.12
HOXC8-201ENST00000040584 SACSQ9NZJ4 4579 aa14.32□□□□□ -0.12
HOXC8-201ENST00000040584 FAM236AA0A1B0GUQ0 79 aa14.32□□□□□ -0.12
HOXC8-201ENST00000040584 FAM236BA0A1B0GV22 79 aa14.32□□□□□ -0.12
HOXC8-201ENST00000040584 Q6JHZ5 121 aa14.32□□□□□ -0.12
HOXC8-201ENST00000040584 IGLV6-57P01721 117 aa14.31□□□□□ -0.12
HOXC8-201ENST00000040584 LCE6AA0A183 80 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms