RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 RBM3P98179 157 aaKnown RBP8.42□□□□□ -1.06
CHPF2-201ENST00000035307 SOSTDC1Q6X4U4 206 aa8.42□□□□□ -1.06
CHPF2-201ENST00000035307 LINC00337Q8N6G1 96 aa8.42□□□□□ -1.06
CHPF2-201ENST00000035307 C19orf73Q9NVV2 129 aa8.42□□□□□ -1.06
CHPF2-201ENST00000035307 PKD1L1Q8TDX9 2849 aa8.42□□□□□ -1.06
CHPF2-201ENST00000035307 CDIP1Q9H305 208 aa8.41□□□□□ -1.06
CHPF2-201ENST00000035307 TIMM17BO60830 172 aa8.41□□□□□ -1.06
CHPF2-201ENST00000035307 CXCL5P42830 114 aa8.41□□□□□ -1.06
CHPF2-201ENST00000035307 KIR2DL5BQ8NHK3 375 aa8.41□□□□□ -1.06
CHPF2-201ENST00000035307 A0A087WZ39 114 aa8.4□□□□□ -1.06
CHPF2-201ENST00000035307 WFDC10BQ8IUB3 73 aa8.4□□□□□ -1.06
CHPF2-201ENST00000035307 RPL37AP8A6NKH3 93 aa8.4□□□□□ -1.07
CHPF2-201ENST00000035307 TENM3Q9P273 2699 aa8.39□□□□□ -1.07
CHPF2-201ENST00000035307 ACYP1P07311 99 aa8.39□□□□□ -1.07
CHPF2-201ENST00000035307 FAM19A5Q7Z5A7 132 aaPredicted RBP8.39□□□□□ -1.07
CHPF2-201ENST00000035307 HIGD2AQ9BW72 106 aa8.39□□□□□ -1.07
CHPF2-201ENST00000035307 COX7BP24311 80 aa8.38□□□□□ -1.07
CHPF2-201ENST00000035307 A0A087WVE0 104 aa8.38□□□□□ -1.07
CHPF2-201ENST00000035307 CCDC179H3BU77 68 aa8.38□□□□□ -1.07
CHPF2-201ENST00000035307 LINC00643Q86TS7 51 aa8.38□□□□□ -1.07
CHPF2-201ENST00000035307 LELP1Q5T871 98 aa8.37□□□□□ -1.07
CHPF2-201ENST00000035307 TMEM256-PLSCR3K7ERE1 68 aa8.37□□□□□ -1.07
CHPF2-201ENST00000035307 ENHOQ6UWT2 76 aa8.37□□□□□ -1.07
CHPF2-201ENST00000035307 IGHV3OR16-9A0A0B4J2B5 98 aa8.36□□□□□ -1.07
CHPF2-201ENST00000035307 C3orf84H3BNL1 204 aa8.36□□□□□ -1.07
CHPF2-201ENST00000035307 JMJD7-PLA2G4BH0Y9G9 81 aa8.35□□□□□ -1.07
CHPF2-201ENST00000035307 SYCNQ0VAF6 134 aa8.35□□□□□ -1.07
CHPF2-201ENST00000035307 Q8IZM0 81 aa8.35□□□□□ -1.07
CHPF2-201ENST00000035307 RMI2Q96E14 147 aa8.35□□□□□ -1.07
CHPF2-201ENST00000035307 CSNK1G2-AS1Q8NCQ2 148 aa8.35□□□□□ -1.07
CHPF2-201ENST00000035307 FAM218AQ96MZ4 157 aa8.35□□□□□ -1.07
CHPF2-201ENST00000035307 CSDC2Q9Y534 153 aaKnown RBP8.35□□□□□ -1.07
CHPF2-201ENST00000035307 TRRAPQ9Y4A5 3859 aa8.34□□□□□ -1.07
CHPF2-201ENST00000035307 NREPQ16612 68 aa8.34□□□□□ -1.07
CHPF2-201ENST00000035307 IGLV5-39A0A0G2JS06 123 aa8.34□□□□□ -1.07
CHPF2-201ENST00000035307 TRBV10-3A0A0K0K1G6 114 aa8.34□□□□□ -1.07
CHPF2-201ENST00000035307 C10orf25Q5T742 122 aa8.33□□□□□ -1.08
CHPF2-201ENST00000035307 C20orf197Q8N268 126 aa8.32□□□□□ -1.08
CHPF2-201ENST00000035307 Q8NAQ8 132 aa8.31□□□□□ -1.08
CHPF2-201ENST00000035307 PPDPFQ9H3Y8 114 aa8.31□□□□□ -1.08
CHPF2-201ENST00000035307 UPK3BQ9BT76 320 aa8.31□□□□□ -1.08
CHPF2-201ENST00000035307 PLAC8L1A1L4L8 177 aa8.3□□□□□ -1.08
CHPF2-201ENST00000035307 LITAFQ99732 161 aa8.3□□□□□ -1.08
CHPF2-201ENST00000035307 K7EIL1 84 aa8.3□□□□□ -1.08
CHPF2-201ENST00000035307 FUSP35637 526 aaKnown RBP eCLIP8.3□□□□□ -1.08
CHPF2-201ENST00000035307 RPL28P46779 137 aaKnown RBP8.3□□□□□ -1.08
CHPF2-201ENST00000035307 TRAV10A0A0B4J240 114 aa8.29□□□□□ -1.08
CHPF2-201ENST00000035307 ATOX1O00244 68 aa8.29□□□□□ -1.08
CHPF2-201ENST00000035307 CCKP06307 115 aa8.29□□□□□ -1.08
CHPF2-201ENST00000035307 LYPD5Q6UWN5 251 aa8.29□□□□□ -1.08
CHPF2-201ENST00000035307 ZNF73O43830 326 aaPredicted RBP8.28□□□□□ -1.08
CHPF2-201ENST00000035307 TGP01266 2768 aa8.28□□□□□ -1.08
CHPF2-201ENST00000035307 ESRGQ1W209 222 aa8.27□□□□□ -1.09
CHPF2-201ENST00000035307 NHLRC4P0CG21 123 aaPredicted RBP8.27□□□□□ -1.09
CHPF2-201ENST00000035307 FAM19A1Q7Z5A9 133 aa8.26□□□□□ -1.09
CHPF2-201ENST00000035307 TENM2Q9NT68 2774 aa8.26□□□□□ -1.09
CHPF2-201ENST00000035307 Q8N814 137 aa8.26□□□□□ -1.09
CHPF2-201ENST00000035307 LY6G6CO95867 125 aa8.26□□□□□ -1.09
CHPF2-201ENST00000035307 UBE2AP49459 152 aa8.26□□□□□ -1.09
CHPF2-201ENST00000035307 Q6ZRU5 148 aa8.26□□□□□ -1.09
CHPF2-201ENST00000035307 IGLV5-45A0A087WSX0 123 aa8.25□□□□□ -1.09
CHPF2-201ENST00000035307 A0A1B0GUV1 79 aa8.25□□□□□ -1.09
CHPF2-201ENST00000035307 LINC00846Q9NV44 126 aa8.25□□□□□ -1.09
CHPF2-201ENST00000035307 USP17L23D6RBM5 183 aa8.24□□□□□ -1.09
CHPF2-201ENST00000035307 KLK5Q9Y337 293 aaPredicted RBP8.24□□□□□ -1.09
CHPF2-201ENST00000035307 SNURFQ9Y675 71 aa8.23□□□□□ -1.09
CHPF2-201ENST00000035307 BPY2O14599 106 aa8.23□□□□□ -1.09
CHPF2-201ENST00000035307 CDK2AP2O75956 126 aa8.22□□□□□ -1.09
CHPF2-201ENST00000035307 NDUFS5O43920 106 aa8.21□□□□□ -1.09
CHPF2-201ENST00000035307 M0R378 163 aa8.2□□□□□ -1.1
CHPF2-201ENST00000035307 COX17Q14061 63 aa8.2□□□□□ -1.1
CHPF2-201ENST00000035307 Q8N9L7 120 aa8.19□□□□□ -1.1
CHPF2-201ENST00000035307 LRCOL1A6NCL2 159 aa8.19□□□□□ -1.1
CHPF2-201ENST00000035307 C3orf22Q8N5N4 141 aa8.19□□□□□ -1.1
CHPF2-201ENST00000035307 C6orf48Q9UBA6 75 aa8.19□□□□□ -1.1
CHPF2-201ENST00000035307 PRR4Q16378 134 aa8.18□□□□□ -1.1
CHPF2-201ENST00000035307 UQCRQO14949 82 aa8.18□□□□□ -1.1
CHPF2-201ENST00000035307 DEFB116Q30KQ4 102 aa8.17□□□□□ -1.1
CHPF2-201ENST00000035307 HRCT1Q6UXD1 115 aa8.17□□□□□ -1.1
CHPF2-201ENST00000035307 EGFEM1PQ0D2K5 195 aa8.17□□□□□ -1.1
CHPF2-201ENST00000035307 H0Y9J4 135 aa8.16□□□□□ -1.1
CHPF2-201ENST00000035307 FAM104AQ969W3 186 aa8.16□□□□□ -1.1
CHPF2-201ENST00000035307 NDUFC2-KCTD14E9PQ53 114 aa8.15□□□□□ -1.1
CHPF2-201ENST00000035307 FAM240AA0A1B0GVK7 77 aa8.15□□□□□ -1.1
CHPF2-201ENST00000035307 LINC00575Q6W349 94 aa8.14□□□□□ -1.11
CHPF2-201ENST00000035307 WFDC13Q8IUB5 93 aa8.14□□□□□ -1.11
CHPF2-201ENST00000035307 IL17DQ8TAD2 202 aa8.13□□□□□ -1.11
CHPF2-201ENST00000035307 PRLHP81277 87 aa8.13□□□□□ -1.11
CHPF2-201ENST00000035307 C9orf129Q5T035 196 aaKnown RBP8.13□□□□□ -1.11
CHPF2-201ENST00000035307 LINC00588Q9Y4M8 146 aa8.13□□□□□ -1.11
CHPF2-201ENST00000035307 PDE6GP18545 87 aa8.12□□□□□ -1.11
CHPF2-201ENST00000035307 M0QXV9 152 aa8.12□□□□□ -1.11
CHPF2-201ENST00000035307 COX7CP15954 63 aa8.11□□□□□ -1.11
CHPF2-201ENST00000035307 SERP2Q8N6R1 65 aa8.11□□□□□ -1.11
CHPF2-201ENST00000035307 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.11□□□□□ -1.11
CHPF2-201ENST00000035307 SMCR5Q8TEV8 140 aa8.11□□□□□ -1.11
CHPF2-201ENST00000035307 NDUFC2O95298 119 aa8.1□□□□□ -1.11
CHPF2-201ENST00000035307 IGLV9-49A0A0B4J1Y8 123 aa8.1□□□□□ -1.11
CHPF2-201ENST00000035307 Q6JHZ5 121 aa8.09□□□□□ -1.11
CHPF2-201ENST00000035307 IMUPQ9GZP8 106 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms