RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 C2orf82Q6UX34 121 aa13.06□□□□□ -0.32
PHGDH-210ENST00000641115 NTN5Q8WTR8 489 aaPredicted RBP13.06□□□□□ -0.32
PHGDH-210ENST00000641115 C14orf177Q52M58 125 aa13.05□□□□□ -0.32
PHGDH-210ENST00000641115 C2orf48Q96LS8 159 aa13.05□□□□□ -0.32
PHGDH-210ENST00000641115 CAMK2N2Q96S95 79 aa13.05□□□□□ -0.32
PHGDH-210ENST00000641115 A0A0J9YXY3 114 aa13.03□□□□□ -0.32
PHGDH-210ENST00000641115 F8WDY8 70 aa13.03□□□□□ -0.32
PHGDH-210ENST00000641115 WFDC2Q14508 124 aa13.03□□□□□ -0.32
PHGDH-210ENST00000641115 HNRNPA3P51991 378 aaKnown RBP13.02□□□□□ -0.32
PHGDH-210ENST00000641115 LRCOL1A6NCL2 159 aa13.02□□□□□ -0.33
PHGDH-210ENST00000641115 MEIG1Q5JSS6 88 aa13.02□□□□□ -0.33
PHGDH-210ENST00000641115 UNQ6190/PRO20217Q6UXQ8 127 aa13.01□□□□□ -0.33
PHGDH-210ENST00000641115 KMT2AQ03164 3969 aa13□□□□□ -0.33
PHGDH-210ENST00000641115 CIRBPQ14011 172 aaKnown RBP13□□□□□ -0.33
PHGDH-210ENST00000641115 C2orf91Q6ZV80 131 aa13□□□□□ -0.33
PHGDH-210ENST00000641115 LINC00587B1AMM8 73 aa12.99□□□□□ -0.33
PHGDH-210ENST00000641115 SYCNQ0VAF6 134 aa12.99□□□□□ -0.33
PHGDH-210ENST00000641115 C10orf25Q5T742 122 aa12.99□□□□□ -0.33
PHGDH-210ENST00000641115 HIGD1BQ9P298 99 aa12.99□□□□□ -0.33
PHGDH-210ENST00000641115 TMEM238C9JI98 176 aa12.99□□□□□ -0.33
PHGDH-210ENST00000641115 Q6ZRU5 148 aa12.99□□□□□ -0.33
PHGDH-210ENST00000641115 TRBV30A0A0K0K1B3 111 aa12.98□□□□□ -0.33
PHGDH-210ENST00000641115 DDTP30046 118 aa12.98□□□□□ -0.33
PHGDH-210ENST00000641115 CARD19Q96LW7 228 aa12.98□□□□□ -0.33
PHGDH-210ENST00000641115 ERG28Q9UKR5 140 aa12.98□□□□□ -0.33
PHGDH-210ENST00000641115 TIMM17BO60830 172 aa12.97□□□□□ -0.33
PHGDH-210ENST00000641115 KMT2CQ8NEZ4 4911 aaKnown RBP12.97□□□□□ -0.33
PHGDH-210ENST00000641115 A0A087WTM6 91 aa12.96□□□□□ -0.33
PHGDH-210ENST00000641115 PCP4L1A6NKN8 68 aa12.96□□□□□ -0.33
PHGDH-210ENST00000641115 C6orf48Q9UBA6 75 aa12.96□□□□□ -0.33
PHGDH-210ENST00000641115 DNAH6Q9C0G6 4158 aa12.96□□□□□ -0.33
PHGDH-210ENST00000641115 SMIM13P0DJ93 91 aa12.95□□□□□ -0.34
PHGDH-210ENST00000641115 PFN2P35080 140 aa12.95□□□□□ -0.34
PHGDH-210ENST00000641115 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.95□□□□□ -0.34
PHGDH-210ENST00000641115 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.95□□□□□ -0.34
PHGDH-210ENST00000641115 A0A0U1RRA0 63 aa12.95□□□□□ -0.34
PHGDH-210ENST00000641115 LINC00158P58513 81 aa12.95□□□□□ -0.34
PHGDH-210ENST00000641115 COX17Q14061 63 aa12.95□□□□□ -0.34
PHGDH-210ENST00000641115 Q8N814 137 aa12.95□□□□□ -0.34
PHGDH-210ENST00000641115 RTL8CO15255 209 aa12.94□□□□□ -0.34
PHGDH-210ENST00000641115 SLPIP03973 132 aa12.94□□□□□ -0.34
PHGDH-210ENST00000641115 SRSF9Q13242 221 aaKnown RBP eCLIP12.94□□□□□ -0.34
PHGDH-210ENST00000641115 C9orf116Q5BN46 136 aaPredicted RBP12.94□□□□□ -0.34
PHGDH-210ENST00000641115 LITAFQ99732 161 aa12.94□□□□□ -0.34
PHGDH-210ENST00000641115 SPANXB1Q9NS25 103 aaPredicted RBP12.94□□□□□ -0.34
PHGDH-210ENST00000641115 CNBPP62633 177 aaKnown RBP12.93□□□□□ -0.34
PHGDH-210ENST00000641115 EREGO14944 169 aa12.92□□□□□ -0.34
PHGDH-210ENST00000641115 HIST1H4GQ99525 98 aa12.92□□□□□ -0.34
PHGDH-210ENST00000641115 RNF151Q2KHN1 245 aa12.91□□□□□ -0.34
PHGDH-210ENST00000641115 ADAMTSL4-AS1Q5T5F5 129 aa12.91□□□□□ -0.34
PHGDH-210ENST00000641115 HYDINQ4G0P3 5121 aa12.91□□□□□ -0.34
PHGDH-210ENST00000641115 DNAH10Q8IVF4 4471 aa12.91□□□□□ -0.34
PHGDH-210ENST00000641115 CTAG1AP78358 180 aa12.91□□□□□ -0.34
PHGDH-210ENST00000641115 TNP2Q05952 138 aa12.91□□□□□ -0.34
PHGDH-210ENST00000641115 DAND5Q8N907 189 aa12.91□□□□□ -0.34
PHGDH-210ENST00000641115 SPANXDQ9BXN6 97 aa12.91□□□□□ -0.34
PHGDH-210ENST00000641115 SPANXCQ9NY87 97 aa12.91□□□□□ -0.34
PHGDH-210ENST00000641115 HSD52Q0P140 79 aa12.9□□□□□ -0.34
PHGDH-210ENST00000641115 Q6ZVH6 145 aa12.9□□□□□ -0.34
PHGDH-210ENST00000641115 MIR7-3HGQ8N6C7 128 aa12.9□□□□□ -0.34
PHGDH-210ENST00000641115 TAL2Q16559 108 aa12.89□□□□□ -0.35
PHGDH-210ENST00000641115 SACSQ9NZJ4 4579 aa12.89□□□□□ -0.35
PHGDH-210ENST00000641115 NDUFC2-KCTD14E9PQ53 114 aa12.87□□□□□ -0.35
PHGDH-210ENST00000641115 NPC2P61916 151 aa12.86□□□□□ -0.35
PHGDH-210ENST00000641115 COPS9Q8WXC6 57 aa12.86□□□□□ -0.35
PHGDH-210ENST00000641115 IFITM1P13164 125 aa12.85□□□□□ -0.35
PHGDH-210ENST00000641115 GCSHP23434 173 aa12.85□□□□□ -0.35
PHGDH-210ENST00000641115 TLX1NBP0CAT3 122 aa12.84□□□□□ -0.35
PHGDH-210ENST00000641115 CEND1Q8N111 149 aa12.84□□□□□ -0.35
PHGDH-210ENST00000641115 RPL18AQ02543 176 aaKnown RBP12.84□□□□□ -0.35
PHGDH-210ENST00000641115 LINC00308Q8TCZ7 52 aa12.84□□□□□ -0.35
PHGDH-210ENST00000641115 LOC107984640A0A0U1RRK4 108 aa12.83□□□□□ -0.36
PHGDH-210ENST00000641115 M0R143 59 aa12.83□□□□□ -0.36
PHGDH-210ENST00000641115 MUSTN1Q8IVN3 82 aa12.83□□□□□ -0.36
PHGDH-210ENST00000641115 PKIGQ9Y2B9 76 aa12.83□□□□□ -0.36
PHGDH-210ENST00000641115 PTTG1IPP53801 180 aa12.82□□□□□ -0.36
PHGDH-210ENST00000641115 Q6ZRP5 223 aa12.82□□□□□ -0.36
PHGDH-210ENST00000641115 LINC00336Q6ZUF6 198 aa12.82□□□□□ -0.36
PHGDH-210ENST00000641115 C9orf163Q8N9P6 203 aa12.82□□□□□ -0.36
PHGDH-210ENST00000641115 SND1-IT1Q9HBX3 110 aa12.82□□□□□ -0.36
PHGDH-210ENST00000641115 RPL24P83731 157 aaKnown RBP12.81□□□□□ -0.36
PHGDH-210ENST00000641115 GAGE2EQ4V326 116 aa12.81□□□□□ -0.36
PHGDH-210ENST00000641115 GAGE2DQ9UEU5 116 aa12.81□□□□□ -0.36
PHGDH-210ENST00000641115 RYR3Q15413 4870 aa12.81□□□□□ -0.36
PHGDH-210ENST00000641115 HINT1P49773 126 aaPredicted RBP12.8□□□□□ -0.36
PHGDH-210ENST00000641115 DNAH2Q9P225 4427 aa12.8□□□□□ -0.36
PHGDH-210ENST00000641115 IGLV5-52A0A0A0MRZ9 124 aa12.8□□□□□ -0.36
PHGDH-210ENST00000641115 SOSTDC1Q6X4U4 206 aa12.8□□□□□ -0.36
PHGDH-210ENST00000641115 PPDPFQ9H3Y8 114 aa12.8□□□□□ -0.36
PHGDH-210ENST00000641115 TMEM238LA0A1B0GVL6 79 aa12.79□□□□□ -0.36
PHGDH-210ENST00000641115 A6NJY4 79 aa12.79□□□□□ -0.36
PHGDH-210ENST00000641115 BVES-AS1Q5T3Y7 98 aa12.79□□□□□ -0.36
PHGDH-210ENST00000641115 XAGE1AQ9HD64 81 aa12.79□□□□□ -0.36
PHGDH-210ENST00000641115 EIF4EBP3O60516 100 aaPredicted RBP12.78□□□□□ -0.36
PHGDH-210ENST00000641115 FXYD2P54710 66 aa12.77□□□□□ -0.36
PHGDH-210ENST00000641115 GAGE2BQ13066 116 aa12.77□□□□□ -0.36
PHGDH-210ENST00000641115 RYR2Q92736 4967 aa12.77□□□□□ -0.37
PHGDH-210ENST00000641115 LOC107984156A0A0G2JMH3 177 aa12.77□□□□□ -0.37
PHGDH-210ENST00000641115 BATFQ16520 125 aa12.77□□□□□ -0.37
PHGDH-210ENST00000641115 ARL17AQ8IVW1 177 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms