RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 TOMM7Q9P0U1 55 aa10.46□□□□□ -0.73
COLCA2-206ENST00000638573 KRTAP29-1A8MX34 341 aaPredicted RBP10.45□□□□□ -0.74
COLCA2-206ENST00000638573 IGLC3P0DOY3 106 aa10.45□□□□□ -0.74
COLCA2-206ENST00000638573 LINC00310P59036 64 aa10.45□□□□□ -0.74
COLCA2-206ENST00000638573 RPL37AP61513 92 aaKnown RBP10.45□□□□□ -0.74
COLCA2-206ENST00000638573 Q6ZRU5 148 aa10.45□□□□□ -0.74
COLCA2-206ENST00000638573 IGLV5-45A0A087WSX0 123 aa10.44□□□□□ -0.74
COLCA2-206ENST00000638573 HSPB8Q9UJY1 196 aa10.44□□□□□ -0.74
COLCA2-206ENST00000638573 LRP1Q07954 4544 aaKnown RBP10.43□□□□□ -0.74
COLCA2-206ENST00000638573 TRAV12-1A0A0B4J245 112 aa10.43□□□□□ -0.74
COLCA2-206ENST00000638573 CHTOPQ9Y3Y2 248 aaKnown RBP10.43□□□□□ -0.74
COLCA2-206ENST00000638573 CKS1BP61024 79 aa10.42□□□□□ -0.74
COLCA2-206ENST00000638573 C6orf226Q5I0X4 101 aa10.42□□□□□ -0.74
COLCA2-206ENST00000638573 Q8IZM0 81 aa10.42□□□□□ -0.74
COLCA2-206ENST00000638573 DPH3Q96FX2 82 aa10.42□□□□□ -0.74
COLCA2-206ENST00000638573 MRPL35Q9NZE8 188 aaKnown RBP10.42□□□□□ -0.74
COLCA2-206ENST00000638573 IGKV2-24A0A0C4DH68 120 aa10.41□□□□□ -0.74
COLCA2-206ENST00000638573 LOC107984640A0A0U1RRK4 108 aa10.41□□□□□ -0.74
COLCA2-206ENST00000638573 SMIM1B2RUZ4 78 aa10.41□□□□□ -0.74
COLCA2-206ENST00000638573 H0Y8G0 127 aa10.41□□□□□ -0.74
COLCA2-206ENST00000638573 NUPR1O60356 82 aa10.41□□□□□ -0.74
COLCA2-206ENST00000638573 FABP4P15090 132 aa10.41□□□□□ -0.74
COLCA2-206ENST00000638573 KIAA0087Q14695 138 aa10.41□□□□□ -0.74
COLCA2-206ENST00000638573 RNF151Q2KHN1 245 aa10.41□□□□□ -0.74
COLCA2-206ENST00000638573 LINC00474Q9P2X8 69 aa10.41□□□□□ -0.74
COLCA2-206ENST00000638573 SPINK8P0C7L1 97 aa10.4□□□□□ -0.74
COLCA2-206ENST00000638573 ZNF22P17026 224 aaPredicted RBP10.4□□□□□ -0.74
COLCA2-206ENST00000638573 CXCL5P42830 114 aa10.4□□□□□ -0.74
COLCA2-206ENST00000638573 CIRBPQ14011 172 aaKnown RBP10.4□□□□□ -0.74
COLCA2-206ENST00000638573 TMEM170BQ5T4T1 132 aa10.4□□□□□ -0.74
COLCA2-206ENST00000638573 UNQ6190/PRO20217Q6UXQ8 127 aa10.4□□□□□ -0.74
COLCA2-206ENST00000638573 A0A087WYN8 130 aa10.39□□□□□ -0.75
COLCA2-206ENST00000638573 TRBV30A0A0K0K1B3 111 aa10.39□□□□□ -0.75
COLCA2-206ENST00000638573 F8VRH5 84 aa10.39□□□□□ -0.75
COLCA2-206ENST00000638573 RPL18AQ02543 176 aaKnown RBP10.39□□□□□ -0.75
COLCA2-206ENST00000638573 SPACA4Q8TDM5 124 aa10.39□□□□□ -0.75
COLCA2-206ENST00000638573 A0A096LNI7 61 aa10.38□□□□□ -0.75
COLCA2-206ENST00000638573 C11orf86A6NJI1 115 aa10.38□□□□□ -0.75
COLCA2-206ENST00000638573 GAGE2BQ13066 116 aa10.38□□□□□ -0.75
COLCA2-206ENST00000638573 MAJINQ3KP22 176 aa10.38□□□□□ -0.75
COLCA2-206ENST00000638573 C2orf82Q6UX34 121 aa10.38□□□□□ -0.75
COLCA2-206ENST00000638573 COX7B2Q8TF08 81 aa10.38□□□□□ -0.75
COLCA2-206ENST00000638573 C10orf25Q5T742 122 aa10.37□□□□□ -0.75
COLCA2-206ENST00000638573 MAP1LC3CQ9BXW4 147 aa10.37□□□□□ -0.75
COLCA2-206ENST00000638573 C6orf48Q9UBA6 75 aa10.37□□□□□ -0.75
COLCA2-206ENST00000638573 PTTG1IPP53801 180 aa10.35□□□□□ -0.75
COLCA2-206ENST00000638573 ODF1Q14990 250 aa10.34□□□□□ -0.75
COLCA2-206ENST00000638573 COA6Q5JTJ3 125 aaKnown RBP10.34□□□□□ -0.75
COLCA2-206ENST00000638573 IGLV5-39A0A0G2JS06 123 aa10.33□□□□□ -0.76
COLCA2-206ENST00000638573 TLX1NBP0CAT3 122 aa10.33□□□□□ -0.76
COLCA2-206ENST00000638573 PLNP26678 52 aa10.33□□□□□ -0.76
COLCA2-206ENST00000638573 STPG4Q8N801 248 aa10.33□□□□□ -0.76
COLCA2-206ENST00000638573 FAT3Q8TDW7 4589 aa10.32□□□□□ -0.76
COLCA2-206ENST00000638573 PLAC8Q9NZF1 115 aa10.32□□□□□ -0.76
COLCA2-206ENST00000638573 NDUFC2-KCTD14E9PQ53 114 aa10.31□□□□□ -0.76
COLCA2-206ENST00000638573 TMEM223A0PJW6 202 aa10.3□□□□□ -0.76
COLCA2-206ENST00000638573 DPM2O94777 84 aa10.3□□□□□ -0.76
COLCA2-206ENST00000638573 OXTP01178 125 aa10.3□□□□□ -0.76
COLCA2-206ENST00000638573 MT1HL1P0DM35 61 aa10.3□□□□□ -0.76
COLCA2-206ENST00000638573 GAGE2EQ4V326 116 aa10.3□□□□□ -0.76
COLCA2-206ENST00000638573 C9orf116Q5BN46 136 aaPredicted RBP10.3□□□□□ -0.76
COLCA2-206ENST00000638573 SFTA2Q6UW10 78 aa10.3□□□□□ -0.76
COLCA2-206ENST00000638573 Q6ZRP5 223 aa10.3□□□□□ -0.76
COLCA2-206ENST00000638573 GAGE2DQ9UEU5 116 aa10.3□□□□□ -0.76
COLCA2-206ENST00000638573 PKHD1L1Q86WI1 4243 aa10.29□□□□□ -0.76
COLCA2-206ENST00000638573 IGKCP01834 107 aa10.29□□□□□ -0.76
COLCA2-206ENST00000638573 SYS1-DBNDD2H3BUS1 97 aa10.28□□□□□ -0.76
COLCA2-206ENST00000638573 S100A6P06703 90 aa10.28□□□□□ -0.76
COLCA2-206ENST00000638573 HERVK_113P61574 105 aa10.28□□□□□ -0.76
COLCA2-206ENST00000638573 C7orf33Q8WU49 177 aa10.28□□□□□ -0.76
COLCA2-206ENST00000638573 PMCHL2Q9BQD1 86 aa10.28□□□□□ -0.76
COLCA2-206ENST00000638573 PET117Q6UWS5 81 aa10.26□□□□□ -0.77
COLCA2-206ENST00000638573 S100A2P29034 98 aa10.25□□□□□ -0.77
COLCA2-206ENST00000638573 KRTDAPP60985 99 aa10.25□□□□□ -0.77
COLCA2-206ENST00000638573 C20orf202A1L168 122 aa10.23□□□□□ -0.77
COLCA2-206ENST00000638573 C3orf79P0CE67 100 aa10.23□□□□□ -0.77
COLCA2-206ENST00000638573 PRR3P79522 188 aaKnown RBP10.23□□□□□ -0.77
COLCA2-206ENST00000638573 A0A1W2PNN7 141 aa10.22□□□□□ -0.77
COLCA2-206ENST00000638573 PFN2P35080 140 aa10.22□□□□□ -0.77
COLCA2-206ENST00000638573 LINC01545Q5VT33 79 aa10.22□□□□□ -0.77
COLCA2-206ENST00000638573 FAM19A5Q7Z5A7 132 aaPredicted RBP10.22□□□□□ -0.77
COLCA2-206ENST00000638573 PLEKHB2Q96CS7 222 aa10.22□□□□□ -0.77
COLCA2-206ENST00000638573 ZNF625Q96I27 306 aaPredicted RBP10.22□□□□□ -0.77
COLCA2-206ENST00000638573 ERG28Q9UKR5 140 aa10.22□□□□□ -0.77
COLCA2-206ENST00000638573 LEPROTO15243 131 aa10.21□□□□□ -0.77
COLCA2-206ENST00000638573 COX17Q14061 63 aa10.21□□□□□ -0.77
COLCA2-206ENST00000638573 XAGE1AQ9HD64 81 aa10.21□□□□□ -0.77
COLCA2-206ENST00000638573 HERV-K104P63124 156 aa10.2□□□□□ -0.78
COLCA2-206ENST00000638573 C9orf129Q5T035 196 aaKnown RBP10.2□□□□□ -0.78
COLCA2-206ENST00000638573 HIST3H2BBQ8N257 126 aa10.2□□□□□ -0.78
COLCA2-206ENST00000638573 MYMXA0A1B0GTQ4 84 aa10.19□□□□□ -0.78
COLCA2-206ENST00000638573 FAM168BA1KXE4 195 aa10.19□□□□□ -0.78
COLCA2-206ENST00000638573 LGALS3P17931 250 aaKnown RBP10.19□□□□□ -0.78
COLCA2-206ENST00000638573 NDUFA12Q9UI09 145 aa10.19□□□□□ -0.78
COLCA2-206ENST00000638573 HMCN2Q8NDA2 5059 aa10.18□□□□□ -0.78
COLCA2-206ENST00000638573 J3QQQ9 107 aa10.18□□□□□ -0.78
COLCA2-206ENST00000638573 AKR1D1P51857 326 aa10.18□□□□□ -0.78
COLCA2-206ENST00000638573 MEIG1Q5JSS6 88 aa10.18□□□□□ -0.78
COLCA2-206ENST00000638573 SERTAD4-AS1Q5TG53 156 aa10.18□□□□□ -0.78
COLCA2-206ENST00000638573 LINC00587B1AMM8 73 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms