RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 SMCO4Q9NRQ5 59 aa11.65□□□□□ -0.54
CLN6-221ENST00000637494 FA2HQ7L5A8 372 aa11.64□□□□□ -0.55
CLN6-221ENST00000637494 CDKN2A-AS1Q9UH64 79 aa11.64□□□□□ -0.55
CLN6-221ENST00000637494 IGLV7-43P04211 117 aa11.63□□□□□ -0.55
CLN6-221ENST00000637494 CXCL5P42830 114 aa11.63□□□□□ -0.55
CLN6-221ENST00000637494 FABP9Q0Z7S8 132 aa11.63□□□□□ -0.55
CLN6-221ENST00000637494 RHEBQ15382 184 aa11.63□□□□□ -0.55
CLN6-221ENST00000637494 LINC00469Q8N7U9 141 aa11.63□□□□□ -0.55
CLN6-221ENST00000637494 DIRC1Q969H9 104 aa11.63□□□□□ -0.55
CLN6-221ENST00000637494 RPS10P5Q9NQ39 176 aa11.63□□□□□ -0.55
CLN6-221ENST00000637494 KRTAP10-8P60410 259 aa11.62□□□□□ -0.55
CLN6-221ENST00000637494 MRPL18Q9H0U6 180 aaKnown RBP11.62□□□□□ -0.55
CLN6-221ENST00000637494 F8VRH5 84 aa11.61□□□□□ -0.55
CLN6-221ENST00000637494 HMCN2Q8NDA2 5059 aa11.6□□□□□ -0.55
CLN6-221ENST00000637494 LINC01546A6NGU7 62 aa11.6□□□□□ -0.55
CLN6-221ENST00000637494 C9orf129Q5T035 196 aaKnown RBP11.6□□□□□ -0.55
CLN6-221ENST00000637494 TINCRA0A1B0GVN0 87 aa11.59□□□□□ -0.55
CLN6-221ENST00000637494 PDZD11Q5EBL8 140 aa11.58□□□□□ -0.56
CLN6-221ENST00000637494 C10orf91Q5T1B1 145 aa11.58□□□□□ -0.56
CLN6-221ENST00000637494 CARHSP1Q9Y2V2 147 aaKnown RBP11.58□□□□□ -0.56
CLN6-221ENST00000637494 PMVKQ15126 192 aa11.57□□□□□ -0.56
CLN6-221ENST00000637494 COX7B2Q8TF08 81 aa11.57□□□□□ -0.56
CLN6-221ENST00000637494 SMIM1B2RUZ4 78 aa11.56□□□□□ -0.56
CLN6-221ENST00000637494 LBHQ53QV2 105 aaPredicted RBP11.56□□□□□ -0.56
CLN6-221ENST00000637494 KRTAP7-1Q8IUC3 87 aa11.56□□□□□ -0.56
CLN6-221ENST00000637494 CST9LQ9H4G1 147 aa11.56□□□□□ -0.56
CLN6-221ENST00000637494 H0Y9J4 135 aa11.55□□□□□ -0.56
CLN6-221ENST00000637494 H3BRM9 83 aa11.55□□□□□ -0.56
CLN6-221ENST00000637494 XAGE1AQ9HD64 81 aa11.55□□□□□ -0.56
CLN6-221ENST00000637494 IGLV5-45A0A087WSX0 123 aa11.54□□□□□ -0.56
CLN6-221ENST00000637494 KRTAP11-1Q8IUC1 163 aa11.54□□□□□ -0.56
CLN6-221ENST00000637494 TRAPPC1Q9Y5R8 145 aa11.54□□□□□ -0.56
CLN6-221ENST00000637494 NDUFA5Q16718 116 aa11.53□□□□□ -0.56
CLN6-221ENST00000637494 C22orf24Q9Y442 160 aa11.53□□□□□ -0.56
CLN6-221ENST00000637494 NUPR1O60356 82 aa11.52□□□□□ -0.57
CLN6-221ENST00000637494 NDUFA6P56556 154 aa11.52□□□□□ -0.57
CLN6-221ENST00000637494 SPINK8P0C7L1 97 aa11.51□□□□□ -0.57
CLN6-221ENST00000637494 ODF1Q14990 250 aa11.51□□□□□ -0.57
CLN6-221ENST00000637494 LINC00614P0C842 121 aa11.5□□□□□ -0.57
CLN6-221ENST00000637494 TP73-AS1Q9UF72 201 aa11.5□□□□□ -0.57
CLN6-221ENST00000637494 SNAPINO95295 136 aa11.49□□□□□ -0.57
CLN6-221ENST00000637494 APOC3P02656 99 aa11.49□□□□□ -0.57
CLN6-221ENST00000637494 RAB5BP61020 215 aa11.49□□□□□ -0.57
CLN6-221ENST00000637494 IGLV1-50A0A075B6I6 118 aa11.48□□□□□ -0.57
CLN6-221ENST00000637494 ATP5LO75964 103 aa11.48□□□□□ -0.57
CLN6-221ENST00000637494 HBDP02042 147 aa11.48□□□□□ -0.57
CLN6-221ENST00000637494 MRPL55Q7Z7F7 128 aaKnown RBP11.48□□□□□ -0.57
CLN6-221ENST00000637494 SVBPQ8N300 66 aa11.48□□□□□ -0.57
CLN6-221ENST00000637494 PRR26Q8N8Z3 221 aa11.48□□□□□ -0.57
CLN6-221ENST00000637494 C18orf32Q8TCD1 76 aa11.48□□□□□ -0.57
CLN6-221ENST00000637494 TNXBP22105 4242 aa11.46□□□□□ -0.57
CLN6-221ENST00000637494 ZNF861PO60384 105 aa11.46□□□□□ -0.57
CLN6-221ENST00000637494 IGLC3P0DOY3 106 aa11.46□□□□□ -0.57
CLN6-221ENST00000637494 RPL13AP40429 203 aaKnown RBP11.44□□□□□ -0.58
CLN6-221ENST00000637494 NKAPP1Q8N9T2 125 aa11.44□□□□□ -0.58
CLN6-221ENST00000637494 A0A096LNJ9 63 aa11.42□□□□□ -0.58
CLN6-221ENST00000637494 RPL28P46779 137 aaKnown RBP11.42□□□□□ -0.58
CLN6-221ENST00000637494 PMCHL1Q16048 86 aa11.42□□□□□ -0.58
CLN6-221ENST00000637494 ZNF22P17026 224 aaPredicted RBP11.41□□□□□ -0.58
CLN6-221ENST00000637494 BAGE3Q86Y29 109 aa11.41□□□□□ -0.58
CLN6-221ENST00000637494 URB1-AS1Q96HZ7 61 aa11.41□□□□□ -0.58
CLN6-221ENST00000637494 LINC00167Q96N53 147 aa11.41□□□□□ -0.58
CLN6-221ENST00000637494 IGLV5-39A0A0G2JS06 123 aa11.4□□□□□ -0.58
CLN6-221ENST00000637494 RPL37AP8A6NKH3 93 aa11.4□□□□□ -0.58
CLN6-221ENST00000637494 BCE1O60756 84 aa11.4□□□□□ -0.58
CLN6-221ENST00000637494 KRTAP1-4P0C5Y4 121 aa11.4□□□□□ -0.58
CLN6-221ENST00000637494 PFN2P35080 140 aa11.4□□□□□ -0.58
CLN6-221ENST00000637494 TMEM170BQ5T4T1 132 aa11.39□□□□□ -0.59
CLN6-221ENST00000637494 SFTA2Q6UW10 78 aa11.39□□□□□ -0.59
CLN6-221ENST00000637494 IGLV5-37A0A075B6J1 123 aa11.38□□□□□ -0.59
CLN6-221ENST00000637494 GAGE10A6NGK3 116 aa11.38□□□□□ -0.59
CLN6-221ENST00000637494 UBR4Q5T4S7 5183 aa11.37□□□□□ -0.59
CLN6-221ENST00000637494 COX17Q14061 63 aa11.37□□□□□ -0.59
CLN6-221ENST00000637494 ERG28Q9UKR5 140 aa11.37□□□□□ -0.59
CLN6-221ENST00000637494 CHCHD1Q96BP2 118 aaKnown RBP11.36□□□□□ -0.59
CLN6-221ENST00000637494 CHTOPQ9Y3Y2 248 aaKnown RBP11.36□□□□□ -0.59
CLN6-221ENST00000637494 C11orf86A6NJI1 115 aa11.35□□□□□ -0.59
CLN6-221ENST00000637494 UBE2AP49459 152 aa11.35□□□□□ -0.59
CLN6-221ENST00000637494 RPL24P83731 157 aaKnown RBP11.35□□□□□ -0.59
CLN6-221ENST00000637494 ZNF625Q96I27 306 aaPredicted RBP11.33□□□□□ -0.6
CLN6-221ENST00000637494 SND1-IT1Q9HBX3 110 aa11.33□□□□□ -0.6
CLN6-221ENST00000637494 IGKV2-28A0A075B6P5 120 aa11.31□□□□□ -0.6
CLN6-221ENST00000637494 IGKV2D-28P01615 120 aa11.31□□□□□ -0.6
CLN6-221ENST00000637494 IFI27L1Q96BM0 104 aa11.31□□□□□ -0.6
CLN6-221ENST00000637494 TRAV12-1A0A0B4J245 112 aa11.3□□□□□ -0.6
CLN6-221ENST00000637494 HSBP1O75506 76 aa11.29□□□□□ -0.6
CLN6-221ENST00000637494 CRYGAP11844 174 aa11.29□□□□□ -0.6
CLN6-221ENST00000637494 LINC00158P58513 81 aa11.29□□□□□ -0.6
CLN6-221ENST00000637494 YPEL4Q96NS1 127 aa11.29□□□□□ -0.6
CLN6-221ENST00000637494 ATP6V1G1O75348 118 aa11.28□□□□□ -0.6
CLN6-221ENST00000637494 VPREB1P12018 145 aa11.28□□□□□ -0.6
CLN6-221ENST00000637494 LRP2P98164 4655 aa11.27□□□□□ -0.6
CLN6-221ENST00000637494 SCO1O75880 301 aa11.27□□□□□ -0.61
CLN6-221ENST00000637494 TMEM223A0PJW6 202 aa11.26□□□□□ -0.61
CLN6-221ENST00000637494 TYMSOSQ8TAI1 123 aa11.26□□□□□ -0.61
CLN6-221ENST00000637494 FAM19A1Q7Z5A9 133 aa11.25□□□□□ -0.61
CLN6-221ENST00000637494 PRR4Q16378 134 aa11.24□□□□□ -0.61
CLN6-221ENST00000637494 CBLN2Q8IUK8 224 aa11.24□□□□□ -0.61
CLN6-221ENST00000637494 TMEM126AQ9H061 195 aa11.24□□□□□ -0.61
CLN6-221ENST00000637494 MEIG1Q5JSS6 88 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms