RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 UNQ6190/PRO20217Q6UXQ8 127 aa9.37□□□□□ -0.91
CDC42BPB-209ENST00000634889 PLAC8Q9NZF1 115 aa9.37□□□□□ -0.91
CDC42BPB-209ENST00000634889 TOMM7Q9P0U1 55 aa9.37□□□□□ -0.91
CDC42BPB-209ENST00000634889 HIST1H2BKO60814 126 aa9.36□□□□□ -0.91
CDC42BPB-209ENST00000634889 HIST1H2BJP06899 126 aa9.36□□□□□ -0.91
CDC42BPB-209ENST00000634889 TLX1NBP0CAT3 122 aa9.36□□□□□ -0.91
CDC42BPB-209ENST00000634889 HIST1H2BOP23527 126 aa9.36□□□□□ -0.91
CDC42BPB-209ENST00000634889 HIST1H2BBP33778 126 aa9.36□□□□□ -0.91
CDC42BPB-209ENST00000634889 CXCL5P42830 114 aa9.36□□□□□ -0.91
CDC42BPB-209ENST00000634889 HIST1H2BDP58876 126 aa9.36□□□□□ -0.91
CDC42BPB-209ENST00000634889 HIST1H2BCP62807 126 aa9.36□□□□□ -0.91
CDC42BPB-209ENST00000634889 HIST2H2BEQ16778 126 aa9.36□□□□□ -0.91
CDC42BPB-209ENST00000634889 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.36□□□□□ -0.91
CDC42BPB-209ENST00000634889 C2orf82Q6UX34 121 aa9.36□□□□□ -0.91
CDC42BPB-209ENST00000634889 HIST1H2BHQ93079 126 aa9.36□□□□□ -0.91
CDC42BPB-209ENST00000634889 HIST1H2BNQ99877 126 aa9.36□□□□□ -0.91
CDC42BPB-209ENST00000634889 HIST1H2BMQ99879 126 aa9.36□□□□□ -0.91
CDC42BPB-209ENST00000634889 C6orf48Q9UBA6 75 aa9.36□□□□□ -0.91
CDC42BPB-209ENST00000634889 LEPROTL1O95214 131 aa9.35□□□□□ -0.91
CDC42BPB-209ENST00000634889 PLA2G1BP04054 148 aaKnown RBP9.35□□□□□ -0.91
CDC42BPB-209ENST00000634889 ZNF22P17026 224 aaPredicted RBP9.35□□□□□ -0.91
CDC42BPB-209ENST00000634889 HSPB8Q9UJY1 196 aa9.35□□□□□ -0.91
CDC42BPB-209ENST00000634889 CHTOPQ9Y3Y2 248 aaKnown RBP9.35□□□□□ -0.91
CDC42BPB-209ENST00000634889 NUPR1O60356 82 aa9.34□□□□□ -0.91
CDC42BPB-209ENST00000634889 SPINK8P0C7L1 97 aa9.34□□□□□ -0.91
CDC42BPB-209ENST00000634889 RPL18AQ02543 176 aaKnown RBP9.34□□□□□ -0.91
CDC42BPB-209ENST00000634889 GAGE2BQ13066 116 aa9.34□□□□□ -0.91
CDC42BPB-209ENST00000634889 STPG4Q8N801 248 aa9.34□□□□□ -0.91
CDC42BPB-209ENST00000634889 COX7B2Q8TF08 81 aa9.34□□□□□ -0.91
CDC42BPB-209ENST00000634889 C11orf86A6NJI1 115 aa9.33□□□□□ -0.92
CDC42BPB-209ENST00000634889 F8VRH5 84 aa9.33□□□□□ -0.92
CDC42BPB-209ENST00000634889 IGLV5-39A0A0G2JS06 123 aa9.32□□□□□ -0.92
CDC42BPB-209ENST00000634889 ABCA13Q86UQ4 5058 aa9.31□□□□□ -0.92
CDC42BPB-209ENST00000634889 NDUFC2-KCTD14E9PQ53 114 aa9.31□□□□□ -0.92
CDC42BPB-209ENST00000634889 TMEM170BQ5T4T1 132 aa9.31□□□□□ -0.92
CDC42BPB-209ENST00000634889 Q6ZRP5 223 aa9.31□□□□□ -0.92
CDC42BPB-209ENST00000634889 FABP4P15090 132 aa9.3□□□□□ -0.92
CDC42BPB-209ENST00000634889 FAT1Q14517 4588 aa9.29□□□□□ -0.92
CDC42BPB-209ENST00000634889 SRRM2Q9UQ35 2752 aaKnown RBP9.29□□□□□ -0.92
CDC42BPB-209ENST00000634889 ODF1Q14990 250 aa9.29□□□□□ -0.92
CDC42BPB-209ENST00000634889 C7orf33Q8WU49 177 aa9.29□□□□□ -0.92
CDC42BPB-209ENST00000634889 H0Y8G0 127 aa9.28□□□□□ -0.92
CDC42BPB-209ENST00000634889 C9orf116Q5BN46 136 aaPredicted RBP9.28□□□□□ -0.92
CDC42BPB-209ENST00000634889 COA6Q5JTJ3 125 aaKnown RBP9.28□□□□□ -0.92
CDC42BPB-209ENST00000634889 SFTA2Q6UW10 78 aa9.28□□□□□ -0.92
CDC42BPB-209ENST00000634889 TMEM223A0PJW6 202 aa9.27□□□□□ -0.93
CDC42BPB-209ENST00000634889 PLNP26678 52 aa9.27□□□□□ -0.93
CDC42BPB-209ENST00000634889 KRTAP10-4P60372 401 aaPredicted RBP9.27□□□□□ -0.93
CDC42BPB-209ENST00000634889 RPL37AP61513 92 aaKnown RBP9.27□□□□□ -0.93
CDC42BPB-209ENST00000634889 MAP1LC3CQ9BXW4 147 aa9.27□□□□□ -0.93
CDC42BPB-209ENST00000634889 GAGE2EQ4V326 116 aa9.26□□□□□ -0.93
CDC42BPB-209ENST00000634889 GAGE2DQ9UEU5 116 aa9.26□□□□□ -0.93
CDC42BPB-209ENST00000634889 VPS13BQ7Z7G8 4022 aa9.26□□□□□ -0.93
CDC42BPB-209ENST00000634889 A0A1W2PNN7 141 aa9.25□□□□□ -0.93
CDC42BPB-209ENST00000634889 INAFM2P0DMQ5 153 aa9.25□□□□□ -0.93
CDC42BPB-209ENST00000634889 DPM2O94777 84 aa9.23□□□□□ -0.93
CDC42BPB-209ENST00000634889 C9orf129Q5T035 196 aaKnown RBP9.23□□□□□ -0.93
CDC42BPB-209ENST00000634889 FAM168BA1KXE4 195 aa9.21□□□□□ -0.94
CDC42BPB-209ENST00000634889 SYS1-DBNDD2H3BUS1 97 aa9.21□□□□□ -0.94
CDC42BPB-209ENST00000634889 IGKCP01834 107 aa9.21□□□□□ -0.94
CDC42BPB-209ENST00000634889 COX17Q14061 63 aa9.21□□□□□ -0.94
CDC42BPB-209ENST00000634889 ZNF625Q96I27 306 aaPredicted RBP9.21□□□□□ -0.94
CDC42BPB-209ENST00000634889 PRR3P79522 188 aaKnown RBP9.2□□□□□ -0.94
CDC42BPB-209ENST00000634889 FAM19A5Q7Z5A7 132 aaPredicted RBP9.2□□□□□ -0.94
CDC42BPB-209ENST00000634889 ERG28Q9UKR5 140 aa9.2□□□□□ -0.94
CDC42BPB-209ENST00000634889 HERVK_113P61574 105 aa9.19□□□□□ -0.94
CDC42BPB-209ENST00000634889 PET117Q6UWS5 81 aa9.19□□□□□ -0.94
CDC42BPB-209ENST00000634889 PMCHL2Q9BQD1 86 aa9.19□□□□□ -0.94
CDC42BPB-209ENST00000634889 XAGE1AQ9HD64 81 aa9.19□□□□□ -0.94
CDC42BPB-209ENST00000634889 M0QXV9 152 aa9.18□□□□□ -0.94
CDC42BPB-209ENST00000634889 PHF5AQ7RTV0 110 aaKnown RBP9.18□□□□□ -0.94
CDC42BPB-209ENST00000634889 KRTAP7-1Q8IUC3 87 aa9.18□□□□□ -0.94
CDC42BPB-209ENST00000634889 LEPROTO15243 131 aa9.17□□□□□ -0.94
CDC42BPB-209ENST00000634889 PFN2P35080 140 aa9.17□□□□□ -0.94
CDC42BPB-209ENST00000634889 HERV-K104P63124 156 aa9.17□□□□□ -0.94
CDC42BPB-209ENST00000634889 LINC01545Q5VT33 79 aa9.17□□□□□ -0.94
CDC42BPB-209ENST00000634889 PLEKHB2Q96CS7 222 aa9.17□□□□□ -0.94
CDC42BPB-209ENST00000634889 C3orf79P0CE67 100 aa9.16□□□□□ -0.94
CDC42BPB-209ENST00000634889 PLA2G2DQ9UNK4 145 aa9.16□□□□□ -0.94
CDC42BPB-209ENST00000634889 SERTAD4-AS1Q5TG53 156 aa9.15□□□□□ -0.94
CDC42BPB-209ENST00000634889 TP73-AS1Q9UF72 201 aa9.15□□□□□ -0.94
CDC42BPB-209ENST00000634889 NDUFA12Q9UI09 145 aa9.15□□□□□ -0.94
CDC42BPB-209ENST00000634889 MYMXA0A1B0GTQ4 84 aa9.14□□□□□ -0.95
CDC42BPB-209ENST00000634889 LINC00587B1AMM8 73 aa9.14□□□□□ -0.95
CDC42BPB-209ENST00000634889 HNRNPA3P51991 378 aaKnown RBP9.14□□□□□ -0.95
CDC42BPB-209ENST00000634889 KRTDAPP60985 99 aa9.14□□□□□ -0.95
CDC42BPB-209ENST00000634889 J3QQQ9 107 aa9.13□□□□□ -0.95
CDC42BPB-209ENST00000634889 NMUP48645 174 aa9.13□□□□□ -0.95
CDC42BPB-209ENST00000634889 TSPEAR-AS2P59090 65 aa9.13□□□□□ -0.95
CDC42BPB-209ENST00000634889 SND1-IT1Q9HBX3 110 aa9.13□□□□□ -0.95
CDC42BPB-209ENST00000634889 PSORS1C2Q9UIG4 136 aa9.13□□□□□ -0.95
CDC42BPB-209ENST00000634889 C22orf24Q9Y442 160 aa9.13□□□□□ -0.95
CDC42BPB-209ENST00000634889 C20orf202A1L168 122 aa9.12□□□□□ -0.95
CDC42BPB-209ENST00000634889 E9PLD3 99 aa9.12□□□□□ -0.95
CDC42BPB-209ENST00000634889 S100A6P06703 90 aa9.12□□□□□ -0.95
CDC42BPB-209ENST00000634889 LINC00158P58513 81 aa9.12□□□□□ -0.95
CDC42BPB-209ENST00000634889 LBHQ53QV2 105 aaPredicted RBP9.12□□□□□ -0.95
CDC42BPB-209ENST00000634889 IGLV5-37A0A075B6J1 123 aa9.11□□□□□ -0.95
CDC42BPB-209ENST00000634889 LGALS3P17931 250 aaKnown RBP9.11□□□□□ -0.95
CDC42BPB-209ENST00000634889 UBE2BP63146 152 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms