RNA–Protein interactions for RNA: ENST00000628979.2

CIRBP-246, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-246ENST00000628979 GAGE2DQ9UEU5 116 aa12.94□□□□□ -0.34
CIRBP-246ENST00000628979 HBDP02042 147 aa12.93□□□□□ -0.34
CIRBP-246ENST00000628979 C9orf116Q5BN46 136 aaPredicted RBP12.93□□□□□ -0.34
CIRBP-246ENST00000628979 PKHD1L1Q86WI1 4243 aa12.92□□□□□ -0.34
CIRBP-246ENST00000628979 TRBV30A0A0K0K1B3 111 aa12.92□□□□□ -0.34
CIRBP-246ENST00000628979 Q6ZRP5 223 aa12.92□□□□□ -0.34
CIRBP-246ENST00000628979 Q8IZM0 81 aa12.92□□□□□ -0.34
CIRBP-246ENST00000628979 TLX1NBP0CAT3 122 aa12.91□□□□□ -0.34
CIRBP-246ENST00000628979 KRTAP29-1A8MX34 341 aaPredicted RBP12.9□□□□□ -0.34
CIRBP-246ENST00000628979 SPINK8P0C7L1 97 aa12.89□□□□□ -0.35
CIRBP-246ENST00000628979 DMBT1Q9UGM3 2413 aaPredicted RBP12.89□□□□□ -0.35
CIRBP-246ENST00000628979 FAM168BA1KXE4 195 aa12.88□□□□□ -0.35
CIRBP-246ENST00000628979 SMIM1B2RUZ4 78 aa12.88□□□□□ -0.35
CIRBP-246ENST00000628979 PRR3P79522 188 aaKnown RBP12.88□□□□□ -0.35
CIRBP-246ENST00000628979 PDZD11Q5EBL8 140 aa12.88□□□□□ -0.35
CIRBP-246ENST00000628979 PHF5AQ7RTV0 110 aaKnown RBP12.88□□□□□ -0.35
CIRBP-246ENST00000628979 IGLV5-45A0A087WSX0 123 aa12.87□□□□□ -0.35
CIRBP-246ENST00000628979 NDUFC2-KCTD14E9PQ53 114 aa12.86□□□□□ -0.35
CIRBP-246ENST00000628979 ATP5LO75964 103 aa12.86□□□□□ -0.35
CIRBP-246ENST00000628979 TRGC2P03986 189 aa12.86□□□□□ -0.35
CIRBP-246ENST00000628979 FAM19A5Q7Z5A7 132 aaPredicted RBP12.86□□□□□ -0.35
CIRBP-246ENST00000628979 COX7B2Q8TF08 81 aa12.86□□□□□ -0.35
CIRBP-246ENST00000628979 H3BRM9 83 aa12.85□□□□□ -0.35
CIRBP-246ENST00000628979 OXTP01178 125 aa12.85□□□□□ -0.35
CIRBP-246ENST00000628979 BAGE3Q86Y29 109 aa12.85□□□□□ -0.35
CIRBP-246ENST00000628979 CHCHD1Q96BP2 118 aaKnown RBP12.85□□□□□ -0.35
CIRBP-246ENST00000628979 F8VRH5 84 aa12.84□□□□□ -0.35
CIRBP-246ENST00000628979 IGLC3P0DOY3 106 aa12.84□□□□□ -0.35
CIRBP-246ENST00000628979 CXCL5P42830 114 aa12.82□□□□□ -0.36
CIRBP-246ENST00000628979 LRP1Q07954 4544 aaKnown RBP12.81□□□□□ -0.36
CIRBP-246ENST00000628979 C9orf129Q5T035 196 aaKnown RBP12.81□□□□□ -0.36
CIRBP-246ENST00000628979 HSBP1O75506 76 aa12.8□□□□□ -0.36
CIRBP-246ENST00000628979 ZNF22P17026 224 aaPredicted RBP12.8□□□□□ -0.36
CIRBP-246ENST00000628979 FAM19A2Q8N3H0 131 aa12.8□□□□□ -0.36
CIRBP-246ENST00000628979 FAT3Q8TDW7 4589 aa12.79□□□□□ -0.36
CIRBP-246ENST00000628979 PSORS1C2Q9UIG4 136 aa12.79□□□□□ -0.36
CIRBP-246ENST00000628979 CHTOPQ9Y3Y2 248 aaKnown RBP12.79□□□□□ -0.36
CIRBP-246ENST00000628979 HERC1Q15751 4861 aa12.79□□□□□ -0.36
CIRBP-246ENST00000628979 COLCA2A8K830 154 aa12.78□□□□□ -0.36
CIRBP-246ENST00000628979 TMEM170BQ5T4T1 132 aa12.78□□□□□ -0.36
CIRBP-246ENST00000628979 IFI27L1Q96BM0 104 aa12.78□□□□□ -0.36
CIRBP-246ENST00000628979 XAGE1AQ9HD64 81 aa12.78□□□□□ -0.36
CIRBP-246ENST00000628979 C11orf86A6NJI1 115 aa12.77□□□□□ -0.37
CIRBP-246ENST00000628979 M0QXV9 152 aa12.77□□□□□ -0.37
CIRBP-246ENST00000628979 KRTAP7-1Q8IUC3 87 aa12.77□□□□□ -0.37
CIRBP-246ENST00000628979 C1orf137Q5JT78 98 aa12.76□□□□□ -0.37
CIRBP-246ENST00000628979 SCO1O75880 301 aa12.75□□□□□ -0.37
CIRBP-246ENST00000628979 UBE2BP63146 152 aa12.75□□□□□ -0.37
CIRBP-246ENST00000628979 SPINK6Q6UWN8 80 aa12.74□□□□□ -0.37
CIRBP-246ENST00000628979 IGLV5-39A0A0G2JS06 123 aa12.73□□□□□ -0.37
CIRBP-246ENST00000628979 SERF1AO75920 110 aa12.73□□□□□ -0.37
CIRBP-246ENST00000628979 SERTAD4-AS1Q5TG53 156 aa12.73□□□□□ -0.37
CIRBP-246ENST00000628979 KRTAP11-1Q8IUC1 163 aa12.73□□□□□ -0.37
CIRBP-246ENST00000628979 TRAV12-1A0A0B4J245 112 aa12.72□□□□□ -0.37
CIRBP-246ENST00000628979 H0Y8G0 127 aa12.72□□□□□ -0.37
CIRBP-246ENST00000628979 LINC00310P59036 64 aa12.71□□□□□ -0.37
CIRBP-246ENST00000628979 SRSF9Q13242 221 aaKnown RBP eCLIP12.71□□□□□ -0.37
CIRBP-246ENST00000628979 PFN2P35080 140 aa12.7□□□□□ -0.38
CIRBP-246ENST00000628979 C22orf24Q9Y442 160 aa12.7□□□□□ -0.38
CIRBP-246ENST00000628979 NUPR1O60356 82 aa12.69□□□□□ -0.38
CIRBP-246ENST00000628979 LEPROTL1O95214 131 aa12.69□□□□□ -0.38
CIRBP-246ENST00000628979 ZNF625Q96I27 306 aaPredicted RBP12.69□□□□□ -0.38
CIRBP-246ENST00000628979 FABP4P15090 132 aa12.67□□□□□ -0.38
CIRBP-246ENST00000628979 REG3GQ6UW15 175 aa12.67□□□□□ -0.38
CIRBP-246ENST00000628979 TMEM223A0PJW6 202 aa12.66□□□□□ -0.38
CIRBP-246ENST00000628979 IGLV7-43P04211 117 aa12.66□□□□□ -0.38
CIRBP-246ENST00000628979 MT1HL1P0DM35 61 aa12.65□□□□□ -0.38
CIRBP-246ENST00000628979 LBHQ53QV2 105 aaPredicted RBP12.65□□□□□ -0.38
CIRBP-246ENST00000628979 ERG28Q9UKR5 140 aa12.65□□□□□ -0.38
CIRBP-246ENST00000628979 ODF1Q14990 250 aa12.63□□□□□ -0.39
CIRBP-246ENST00000628979 LINC01600Q96MT4 127 aa12.63□□□□□ -0.39
CIRBP-246ENST00000628979 HSPB8Q9UJY1 196 aa12.63□□□□□ -0.39
CIRBP-246ENST00000628979 MRPL55Q7Z7F7 128 aaKnown RBP12.62□□□□□ -0.39
CIRBP-246ENST00000628979 GAGE10A6NGK3 116 aa12.6□□□□□ -0.39
CIRBP-246ENST00000628979 SFTA2Q6UW10 78 aa12.6□□□□□ -0.39
CIRBP-246ENST00000628979 NKAPP1Q8N9T2 125 aa12.6□□□□□ -0.39
CIRBP-246ENST00000628979 TP73-AS1Q9UF72 201 aa12.6□□□□□ -0.39
CIRBP-246ENST00000628979 PLA2G2DQ9UNK4 145 aa12.6□□□□□ -0.39
CIRBP-246ENST00000628979 RPL37AP8A6NKH3 93 aa12.59□□□□□ -0.39
CIRBP-246ENST00000628979 COX17Q14061 63 aa12.59□□□□□ -0.39
CIRBP-246ENST00000628979 DIRC1Q969H9 104 aa12.59□□□□□ -0.39
CIRBP-246ENST00000628979 LINC00167Q96N53 147 aa12.59□□□□□ -0.39
CIRBP-246ENST00000628979 SND1-IT1Q9HBX3 110 aa12.59□□□□□ -0.39
CIRBP-246ENST00000628979 A0A0U1RRA0 63 aa12.58□□□□□ -0.4
CIRBP-246ENST00000628979 HIST1H2BKO60814 126 aa12.58□□□□□ -0.4
CIRBP-246ENST00000628979 HIST1H2BJP06899 126 aa12.58□□□□□ -0.4
CIRBP-246ENST00000628979 HIST1H2BOP23527 126 aa12.58□□□□□ -0.4
CIRBP-246ENST00000628979 HIST1H2BBP33778 126 aa12.58□□□□□ -0.4
CIRBP-246ENST00000628979 LINC00158P58513 81 aa12.58□□□□□ -0.4
CIRBP-246ENST00000628979 HIST1H2BDP58876 126 aa12.58□□□□□ -0.4
CIRBP-246ENST00000628979 HIST1H2BCP62807 126 aa12.58□□□□□ -0.4
CIRBP-246ENST00000628979 HIST2H2BEQ16778 126 aa12.58□□□□□ -0.4
CIRBP-246ENST00000628979 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.58□□□□□ -0.4
CIRBP-246ENST00000628979 HIST1H2BHQ93079 126 aa12.58□□□□□ -0.4
CIRBP-246ENST00000628979 HIST1H2BNQ99877 126 aa12.58□□□□□ -0.4
CIRBP-246ENST00000628979 HIST1H2BMQ99879 126 aa12.58□□□□□ -0.4
CIRBP-246ENST00000628979 PMCHL2Q9BQD1 86 aa12.58□□□□□ -0.4
CIRBP-246ENST00000628979 IGLV5-37A0A075B6J1 123 aa12.55□□□□□ -0.4
CIRBP-246ENST00000628979 MAP1LC3CQ9BXW4 147 aa12.55□□□□□ -0.4
CIRBP-246ENST00000628979 H0Y9J4 135 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms