RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 TRACP01848 142 aa8.21□□□□□ -1.09
LINC00538-201ENST00000626109 M0R2P5 195 aa8.21□□□□□ -1.1
LINC00538-201ENST00000626109 LEPROTO15243 131 aa8.21□□□□□ -1.1
LINC00538-201ENST00000626109 WFDC2Q14508 124 aa8.21□□□□□ -1.1
LINC00538-201ENST00000626109 SLC25A29Q8N8R3 303 aa8.21□□□□□ -1.1
LINC00538-201ENST00000626109 C20orf203Q8NBC4 194 aa8.21□□□□□ -1.1
LINC00538-201ENST00000626109 CRYGAP11844 174 aa8.2□□□□□ -1.1
LINC00538-201ENST00000626109 SORL1Q92673 2214 aa8.19□□□□□ -1.1
LINC00538-201ENST00000626109 SNCGO76070 127 aa8.19□□□□□ -1.1
LINC00538-201ENST00000626109 PRB2P02812 416 aaPredicted RBP8.19□□□□□ -1.1
LINC00538-201ENST00000626109 MUC4Q99102 2169 aa8.19□□□□□ -1.1
LINC00538-201ENST00000626109 PKD1L1Q8TDX9 2849 aa8.19□□□□□ -1.1
LINC00538-201ENST00000626109 H3BMM0 161 aa8.19□□□□□ -1.1
LINC00538-201ENST00000626109 DNHD1Q96M86 4753 aa8.18□□□□□ -1.1
LINC00538-201ENST00000626109 MGAM2Q2M2H8 2515 aa8.18□□□□□ -1.1
LINC00538-201ENST00000626109 LOC107984156A0A0G2JMH3 177 aa8.18□□□□□ -1.1
LINC00538-201ENST00000626109 TMEM223A0PJW6 202 aa8.18□□□□□ -1.1
LINC00538-201ENST00000626109 IGHV3-30P01768 117 aa8.18□□□□□ -1.1
LINC00538-201ENST00000626109 IGHV3-30-5P0DP03 117 aa8.18□□□□□ -1.1
LINC00538-201ENST00000626109 LCA10Q71F78 164 aa8.18□□□□□ -1.1
LINC00538-201ENST00000626109 ARL17AQ8IVW1 177 aa8.18□□□□□ -1.1
LINC00538-201ENST00000626109 A8MTW9 85 aa8.17□□□□□ -1.1
LINC00538-201ENST00000626109 EPM2AB3EWF7 344 aa8.17□□□□□ -1.1
LINC00538-201ENST00000626109 TMEM256-PLSCR3K7ERE1 68 aa8.17□□□□□ -1.1
LINC00538-201ENST00000626109 ETDBQ3ZM63 59 aa8.17□□□□□ -1.1
LINC00538-201ENST00000626109 ATP6V0E2Q8NHE4 81 aa8.17□□□□□ -1.1
LINC00538-201ENST00000626109 DEFB104AQ8WTQ1 72 aa8.17□□□□□ -1.1
LINC00538-201ENST00000626109 K7EIL1 84 aa8.17□□□□□ -1.1
LINC00538-201ENST00000626109 REG3GQ6UW15 175 aa8.17□□□□□ -1.1
LINC00538-201ENST00000626109 PRO1854Q9UHT4 67 aa8.17□□□□□ -1.1
LINC00538-201ENST00000626109 PRO0461Q9UI25 63 aa8.17□□□□□ -1.1
LINC00538-201ENST00000626109 IGLV4-3A0A075B6K6 122 aa8.16□□□□□ -1.1
LINC00538-201ENST00000626109 IGHV3OR16-12A0A075B7B8 117 aa8.16□□□□□ -1.1
LINC00538-201ENST00000626109 UBE2D3P61077 147 aa8.16□□□□□ -1.1
LINC00538-201ENST00000626109 UBE2D2P62837 147 aa8.16□□□□□ -1.1
LINC00538-201ENST00000626109 NOTCH2NLQ7Z3S9 236 aa8.16□□□□□ -1.1
LINC00538-201ENST00000626109 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.15□□□□□ -1.1
LINC00538-201ENST00000626109 CFC1BP0CG36 223 aa8.15□□□□□ -1.1
LINC00538-201ENST00000626109 CFC1P0CG37 223 aa8.15□□□□□ -1.1
LINC00538-201ENST00000626109 SCGB1C2P0DMR2 95 aa8.15□□□□□ -1.1
LINC00538-201ENST00000626109 HTN1P15515 57 aa8.15□□□□□ -1.1
LINC00538-201ENST00000626109 DEFB121Q5J5C9 76 aa8.15□□□□□ -1.1
LINC00538-201ENST00000626109 SH2D6Q7Z4S9 175 aa8.15□□□□□ -1.1
LINC00538-201ENST00000626109 KRTAP3-3Q9BYR6 98 aa8.15□□□□□ -1.1
LINC00538-201ENST00000626109 KRTAP3-2Q9BYR7 98 aa8.15□□□□□ -1.1
LINC00538-201ENST00000626109 H3BT86 120 aa8.15□□□□□ -1.11
LINC00538-201ENST00000626109 ZNF22P17026 224 aaPredicted RBP8.15□□□□□ -1.11
LINC00538-201ENST00000626109 TSPEAR-AS2P59090 65 aa8.15□□□□□ -1.11
LINC00538-201ENST00000626109 CFAP126Q5VTH2 177 aa8.15□□□□□ -1.11
LINC00538-201ENST00000626109 DSCR8Q96T75 97 aa8.15□□□□□ -1.11
LINC00538-201ENST00000626109 OPRPNQ99935 248 aaPredicted RBP8.15□□□□□ -1.11
LINC00538-201ENST00000626109 LINC00467Q9BRT7 94 aa8.15□□□□□ -1.11
LINC00538-201ENST00000626109 AGRNO00468 2067 aa8.14□□□□□ -1.11
LINC00538-201ENST00000626109 TEN1Q86WV5 123 aa8.14□□□□□ -1.11
LINC00538-201ENST00000626109 AMELXQ99217 191 aa8.14□□□□□ -1.11
LINC00538-201ENST00000626109 CMYA5Q8N3K9 4069 aa8.14□□□□□ -1.11
LINC00538-201ENST00000626109 CXCL5P42830 114 aa8.13□□□□□ -1.11
LINC00538-201ENST00000626109 KIAA0087Q14695 138 aa8.13□□□□□ -1.11
LINC00538-201ENST00000626109 A0A0B4J2C4 111 aa8.13□□□□□ -1.11
LINC00538-201ENST00000626109 MRPS36P82909 103 aaKnown RBP8.13□□□□□ -1.11
LINC00538-201ENST00000626109 TIMM21Q9BVV7 248 aa8.13□□□□□ -1.11
LINC00538-201ENST00000626109 IGHV3-73A0A0B4J1V6 119 aa8.12□□□□□ -1.11
LINC00538-201ENST00000626109 IGLV5-45A0A087WSX0 123 aa8.11□□□□□ -1.11
LINC00538-201ENST00000626109 INSP01308 110 aa8.11□□□□□ -1.11
LINC00538-201ENST00000626109 NOTCH1P46531 2555 aa8.11□□□□□ -1.11
LINC00538-201ENST00000626109 NDUFC2-KCTD14E9PQ53 114 aa8.11□□□□□ -1.11
LINC00538-201ENST00000626109 SERP1Q9Y6X1 66 aa8.11□□□□□ -1.11
LINC00538-201ENST00000626109 IGHV3-30-3P0DP02 117 aa8.1□□□□□ -1.11
LINC00538-201ENST00000626109 MUSTN1Q8IVN3 82 aa8.1□□□□□ -1.11
LINC00538-201ENST00000626109 IGHV3-64A0A075B6Q5 118 aa8.09□□□□□ -1.11
LINC00538-201ENST00000626109 A0A0J9YXY3 114 aa8.09□□□□□ -1.11
LINC00538-201ENST00000626109 TCL1BO95988 128 aa8.09□□□□□ -1.11
LINC00538-201ENST00000626109 IGHV3-53P01767 116 aa8.09□□□□□ -1.11
LINC00538-201ENST00000626109 GIG44P09565 113 aaPredicted RBP8.09□□□□□ -1.11
LINC00538-201ENST00000626109 SFTA2Q6UW10 78 aa8.09□□□□□ -1.11
LINC00538-201ENST00000626109 PPDPFLQ8WWR9 84 aa8.09□□□□□ -1.11
LINC00538-201ENST00000626109 NBEAL1Q6ZS30 2694 aa8.09□□□□□ -1.11
LINC00538-201ENST00000626109 SBSPONQ8IVN8 264 aa8.09□□□□□ -1.11
LINC00538-201ENST00000626109 TMEM263Q8WUH6 116 aaKnown RBP8.09□□□□□ -1.11
LINC00538-201ENST00000626109 UBE2D4Q9Y2X8 147 aa8.09□□□□□ -1.11
LINC00538-201ENST00000626109 IGHV3-33P01772 117 aa8.08□□□□□ -1.12
LINC00538-201ENST00000626109 Q1RN00 199 aa8.08□□□□□ -1.12
LINC00538-201ENST00000626109 DEFB135Q30KP9 77 aa8.08□□□□□ -1.12
LINC00538-201ENST00000626109 CHCHD7Q9BUK0 85 aa8.08□□□□□ -1.12
LINC00538-201ENST00000626109 NDUFA12Q9UI09 145 aa8.07□□□□□ -1.12
LINC00538-201ENST00000626109 ATXN8Q156A1 80 aa8.07□□□□□ -1.12
LINC00538-201ENST00000626109 CSNK1G2-AS1Q8NCQ2 148 aa8.07□□□□□ -1.12
LINC00538-201ENST00000626109 COPS9Q8WXC6 57 aa8.07□□□□□ -1.12
LINC00538-201ENST00000626109 VSIG2Q96IQ7 327 aa8.07□□□□□ -1.12
LINC00538-201ENST00000626109 B9D2Q9BPU9 175 aa8.07□□□□□ -1.12
LINC00538-201ENST00000626109 PRSS2P07478 247 aa8.06□□□□□ -1.12
LINC00538-201ENST00000626109 NKAPP1Q8N9T2 125 aa8.06□□□□□ -1.12
LINC00538-201ENST00000626109 CHCHD5Q9BSY4 110 aa8.06□□□□□ -1.12
LINC00538-201ENST00000626109 IGHV3-38A0A0C4DH36 116 aa8.05□□□□□ -1.12
LINC00538-201ENST00000626109 TIMM17BO60830 172 aa8.05□□□□□ -1.12
LINC00538-201ENST00000626109 COX6CP09669 75 aa8.05□□□□□ -1.12
LINC00538-201ENST00000626109 FAM104AQ969W3 186 aa8.05□□□□□ -1.12
LINC00538-201ENST00000626109 DNAH3Q8TD57 4116 aa8.05□□□□□ -1.12
LINC00538-201ENST00000626109 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.05□□□□□ -1.12
LINC00538-201ENST00000626109 TRBV30A0A0K0K1B3 111 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms