RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 H3BMG7 143 aa13.37□□□□□ -0.27
TREX1-205ENST00000625293 SFTA2Q6UW10 78 aa13.37□□□□□ -0.27
TREX1-205ENST00000625293 SPATA25Q9BR10 227 aa13.37□□□□□ -0.27
TREX1-205ENST00000625293 LOC107984156A0A0G2JMH3 177 aa13.37□□□□□ -0.27
TREX1-205ENST00000625293 LYRM7Q5U5X0 104 aa13.37□□□□□ -0.27
TREX1-205ENST00000625293 ARL17AQ8IVW1 177 aa13.37□□□□□ -0.27
TREX1-205ENST00000625293 Q8IZM0 81 aa13.37□□□□□ -0.27
TREX1-205ENST00000625293 COPS9Q8WXC6 57 aa13.36□□□□□ -0.27
TREX1-205ENST00000625293 COX7A2LO14548 114 aa13.35□□□□□ -0.27
TREX1-205ENST00000625293 FOXI1Q12951 378 aa13.35□□□□□ -0.27
TREX1-205ENST00000625293 PRO0461Q9UI25 63 aa13.35□□□□□ -0.27
TREX1-205ENST00000625293 IGLV10-54A0A075B6I4 117 aa13.34□□□□□ -0.27
TREX1-205ENST00000625293 DEFB131BA0A096LNP1 70 aa13.34□□□□□ -0.27
TREX1-205ENST00000625293 IBA57-AS1B1ANH7 110 aa13.34□□□□□ -0.27
TREX1-205ENST00000625293 KIAA0087Q14695 138 aa13.33□□□□□ -0.28
TREX1-205ENST00000625293 F8W1H4 67 aa13.32□□□□□ -0.28
TREX1-205ENST00000625293 TCL1BO95988 128 aa13.32□□□□□ -0.28
TREX1-205ENST00000625293 C6orf226Q5I0X4 101 aa13.32□□□□□ -0.28
TREX1-205ENST00000625293 ENHOQ6UWT2 76 aa13.32□□□□□ -0.28
TREX1-205ENST00000625293 KLK12Q9UKR0 248 aa13.32□□□□□ -0.28
TREX1-205ENST00000625293 TRBV20-1A0A075B6N2 111 aa13.32□□□□□ -0.28
TREX1-205ENST00000625293 H7C2G1 150 aa13.32□□□□□ -0.28
TREX1-205ENST00000625293 WFDC10BQ8IUB3 73 aa13.32□□□□□ -0.28
TREX1-205ENST00000625293 MIR7-3HGQ8N6C7 128 aa13.32□□□□□ -0.28
TREX1-205ENST00000625293 TRBV30A0A0K0K1B3 111 aa13.31□□□□□ -0.28
TREX1-205ENST00000625293 PSMB2P49721 201 aa13.31□□□□□ -0.28
TREX1-205ENST00000625293 ESRGQ1W209 222 aa13.3□□□□□ -0.28
TREX1-205ENST00000625293 Q1RN00 199 aa13.3□□□□□ -0.28
TREX1-205ENST00000625293 OCIAD2Q56VL3 154 aa13.3□□□□□ -0.28
TREX1-205ENST00000625293 TRIAP1O43715 76 aa13.29□□□□□ -0.28
TREX1-205ENST00000625293 GAGE12HA6NDE8 117 aa13.28□□□□□ -0.28
TREX1-205ENST00000625293 SCGB1C2P0DMR2 95 aa13.28□□□□□ -0.28
TREX1-205ENST00000625293 RPL13AP40429 203 aaKnown RBP13.28□□□□□ -0.28
TREX1-205ENST00000625293 LINC00158P58513 81 aa13.28□□□□□ -0.28
TREX1-205ENST00000625293 WFDC2Q14508 124 aa13.28□□□□□ -0.28
TREX1-205ENST00000625293 C2orf82Q6UX34 121 aa13.27□□□□□ -0.28
TREX1-205ENST00000625293 MALP21145 153 aa13.27□□□□□ -0.29
TREX1-205ENST00000625293 CXCL5P42830 114 aa13.27□□□□□ -0.29
TREX1-205ENST00000625293 KLK5Q9Y337 293 aaPredicted RBP13.26□□□□□ -0.29
TREX1-205ENST00000625293 TRAV10A0A0B4J240 114 aa13.25□□□□□ -0.29
TREX1-205ENST00000625293 TRAV8-4A0A0B4J246 113 aa13.25□□□□□ -0.29
TREX1-205ENST00000625293 MTURNQ8N3F0 131 aa13.25□□□□□ -0.29
TREX1-205ENST00000625293 SMCPP49901 116 aaPredicted RBP13.25□□□□□ -0.29
TREX1-205ENST00000625293 CCL18P55774 89 aa13.25□□□□□ -0.29
TREX1-205ENST00000625293 CRPP02741 224 aa13.24□□□□□ -0.29
TREX1-205ENST00000625293 NHLRC4P0CG21 123 aaPredicted RBP13.24□□□□□ -0.29
TREX1-205ENST00000625293 PFN2P35080 140 aa13.24□□□□□ -0.29
TREX1-205ENST00000625293 CKS1BP61024 79 aa13.24□□□□□ -0.29
TREX1-205ENST00000625293 UBE2WQ96B02 151 aa13.24□□□□□ -0.29
TREX1-205ENST00000625293 CFAP161Q6P656 301 aa13.23□□□□□ -0.29
TREX1-205ENST00000625293 STAB2Q8WWQ8 2551 aa13.23□□□□□ -0.29
TREX1-205ENST00000625293 LINC01556Q5JQF7 62 aa13.22□□□□□ -0.29
TREX1-205ENST00000625293 KRTAP26-1Q6PEX3 210 aa13.22□□□□□ -0.29
TREX1-205ENST00000625293 SND1-IT1Q9HBX3 110 aa13.22□□□□□ -0.29
TREX1-205ENST00000625293 IGKV2-28A0A075B6P5 120 aa13.21□□□□□ -0.29
TREX1-205ENST00000625293 IGKV2D-28P01615 120 aa13.21□□□□□ -0.29
TREX1-205ENST00000625293 K7ERU9 68 aa13.2□□□□□ -0.3
TREX1-205ENST00000625293 C15orf53Q8NAA6 179 aa13.2□□□□□ -0.3
TREX1-205ENST00000625293 SPAG11BQ08648 103 aa13.2□□□□□ -0.3
TREX1-205ENST00000625293 COX17Q14061 63 aa13.2□□□□□ -0.3
TREX1-205ENST00000625293 ATXN8Q156A1 80 aa13.2□□□□□ -0.3
TREX1-205ENST00000625293 TRAV13-2A0A0B4J235 113 aa13.18□□□□□ -0.3
TREX1-205ENST00000625293 COX6CP09669 75 aa13.18□□□□□ -0.3
TREX1-205ENST00000625293 ETDBQ3ZM63 59 aa13.18□□□□□ -0.3
TREX1-205ENST00000625293 LINC00337Q8N6G1 96 aa13.18□□□□□ -0.3
TREX1-205ENST00000625293 C6orf223Q8N319 242 aa13.17□□□□□ -0.3
TREX1-205ENST00000625293 DNAH10OSP0CZ25 163 aa13.16□□□□□ -0.3
TREX1-205ENST00000625293 M0QXV9 152 aa13.15□□□□□ -0.3
TREX1-205ENST00000625293 LINC01620Q4KN68 170 aa13.15□□□□□ -0.3
TREX1-205ENST00000625293 C10orf25Q5T742 122 aa13.15□□□□□ -0.3
TREX1-205ENST00000625293 DNAH1Q9P2D7 4330 aa13.15□□□□□ -0.3
TREX1-205ENST00000625293 LST1O00453 97 aa13.15□□□□□ -0.31
TREX1-205ENST00000625293 C9orf116Q5BN46 136 aaPredicted RBP13.14□□□□□ -0.31
TREX1-205ENST00000625293 UNQ6190/PRO20217Q6UXQ8 127 aa13.14□□□□□ -0.31
TREX1-205ENST00000625293 CLEC2BQ92478 149 aa13.14□□□□□ -0.31
TREX1-205ENST00000625293 LINC01600Q96MT4 127 aa13.14□□□□□ -0.31
TREX1-205ENST00000625293 NTN5Q8WTR8 489 aaPredicted RBP13.13□□□□□ -0.31
TREX1-205ENST00000625293 LINC00588Q9Y4M8 146 aa13.13□□□□□ -0.31
TREX1-205ENST00000625293 GVQW2A0A096LPI5 108 aaPredicted RBP13.12□□□□□ -0.31
TREX1-205ENST00000625293 C9JAW5 83 aa13.12□□□□□ -0.31
TREX1-205ENST00000625293 SLC25A20O43772 301 aa13.12□□□□□ -0.31
TREX1-205ENST00000625293 LINC00526Q96FQ7 95 aa13.12□□□□□ -0.31
TREX1-205ENST00000625293 RPL28P46779 137 aaKnown RBP13.12□□□□□ -0.31
TREX1-205ENST00000625293 WWC2-AS2Q96NR7 200 aa13.12□□□□□ -0.31
TREX1-205ENST00000625293 MUC7Q8TAX7 377 aa13.11□□□□□ -0.31
TREX1-205ENST00000625293 DYNC2H1Q8NCM8 4307 aaKnown RBP13.1□□□□□ -0.31
TREX1-205ENST00000625293 TRBV10-2A0A0K0K1G8 114 aa13.09□□□□□ -0.31
TREX1-205ENST00000625293 NDUFC2O95298 119 aa13.09□□□□□ -0.31
TREX1-205ENST00000625293 RNF151Q2KHN1 245 aa13.09□□□□□ -0.31
TREX1-205ENST00000625293 TEN1Q86WV5 123 aa13.09□□□□□ -0.31
TREX1-205ENST00000625293 DNAH7Q8WXX0 4024 aa13.08□□□□□ -0.32
TREX1-205ENST00000625293 C15orf56Q8N910 161 aa13.08□□□□□ -0.32
TREX1-205ENST00000625293 C1orf43Q9BWL3 253 aa13.08□□□□□ -0.32
TREX1-205ENST00000625293 C6orf48Q9UBA6 75 aa13.07□□□□□ -0.32
TREX1-205ENST00000625293 ANKRD29Q8N6D5 301 aa13.07□□□□□ -0.32
TREX1-205ENST00000625293 SMIM11BQ8TCY0 68 aa13.07□□□□□ -0.32
TREX1-205ENST00000625293 UPK3BQ9BT76 320 aa13.06□□□□□ -0.32
TREX1-205ENST00000625293 HIGD2BQ4VC39 106 aa13.04□□□□□ -0.32
TREX1-205ENST00000625293 Q8NDZ9 215 aa13.04□□□□□ -0.32
TREX1-205ENST00000625293 CARD19Q96LW7 228 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms