RNA–Protein interactions for RNA: ENST00000623687.1

DUX4L28-201, Transcript of double homeobox 4 like 28, humanhuman

BASIC

Gene DUX4L28, Length 678 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4L28-201ENST00000623687 KRTAP7-1Q8IUC3 87 aa16.46■□□□□ 0.23
DUX4L28-201ENST00000623687 Q8IZM0 81 aa16.46■□□□□ 0.23
DUX4L28-201ENST00000623687 LINC01600Q96MT4 127 aa16.46■□□□□ 0.23
DUX4L28-201ENST00000623687 NDUFC2-KCTD14E9PQ53 114 aa16.45■□□□□ 0.22
DUX4L28-201ENST00000623687 FAM19A5Q7Z5A7 132 aaPredicted RBP16.45■□□□□ 0.22
DUX4L28-201ENST00000623687 C6orf226Q5I0X4 101 aa16.44■□□□□ 0.22
DUX4L28-201ENST00000623687 FA2HQ7L5A8 372 aa16.44■□□□□ 0.22
DUX4L28-201ENST00000623687 SNAPINO95295 136 aa16.43■□□□□ 0.22
DUX4L28-201ENST00000623687 APOC3P02656 99 aa16.43■□□□□ 0.22
DUX4L28-201ENST00000623687 CKS1BP61024 79 aa16.43■□□□□ 0.22
DUX4L28-201ENST00000623687 KRTAP11-1Q8IUC1 163 aa16.43■□□□□ 0.22
DUX4L28-201ENST00000623687 SMCO4Q9NRQ5 59 aa16.43■□□□□ 0.22
DUX4L28-201ENST00000623687 C9orf129Q5T035 196 aaKnown RBP16.42■□□□□ 0.22
DUX4L28-201ENST00000623687 SVBPQ8N300 66 aa16.42■□□□□ 0.22
DUX4L28-201ENST00000623687 C1orf137Q5JT78 98 aa16.41■□□□□ 0.22
DUX4L28-201ENST00000623687 LINC00469Q8N7U9 141 aa16.41■□□□□ 0.22
DUX4L28-201ENST00000623687 CST9LQ9H4G1 147 aa16.41■□□□□ 0.22
DUX4L28-201ENST00000623687 PLA2G2DQ9UNK4 145 aa16.41■□□□□ 0.22
DUX4L28-201ENST00000623687 TINCRA0A1B0GVN0 87 aa16.4■□□□□ 0.22
DUX4L28-201ENST00000623687 REG3GQ6UW15 175 aa16.4■□□□□ 0.22
DUX4L28-201ENST00000623687 IGLV5-45A0A087WSX0 123 aa16.39■□□□□ 0.21
DUX4L28-201ENST00000623687 SMIM1B2RUZ4 78 aa16.39■□□□□ 0.21
DUX4L28-201ENST00000623687 URB1-AS1Q96HZ7 61 aa16.39■□□□□ 0.21
DUX4L28-201ENST00000623687 TRAPPC1Q9Y5R8 145 aa16.39■□□□□ 0.21
DUX4L28-201ENST00000623687 C18orf32Q8TCD1 76 aa16.38■□□□□ 0.21
DUX4L28-201ENST00000623687 A0A096LNJ9 63 aa16.37■□□□□ 0.21
DUX4L28-201ENST00000623687 M0QXV9 152 aa16.37■□□□□ 0.21
DUX4L28-201ENST00000623687 PMVKQ15126 192 aa16.37■□□□□ 0.21
DUX4L28-201ENST00000623687 F8VRH5 84 aa16.35■□□□□ 0.21
DUX4L28-201ENST00000623687 PDZD11Q5EBL8 140 aa16.34■□□□□ 0.21
DUX4L28-201ENST00000623687 KRTAP10-8P60410 259 aa16.33■□□□□ 0.2
DUX4L28-201ENST00000623687 ODF1Q14990 250 aa16.33■□□□□ 0.2
DUX4L28-201ENST00000623687 IGLV7-43P04211 117 aa16.32■□□□□ 0.2
DUX4L28-201ENST00000623687 SPINK8P0C7L1 97 aa16.32■□□□□ 0.2
DUX4L28-201ENST00000623687 CXCL5P42830 114 aa16.32■□□□□ 0.2
DUX4L28-201ENST00000623687 COX7B2Q8TF08 81 aa16.32■□□□□ 0.2
DUX4L28-201ENST00000623687 LINC00614P0C842 121 aa16.31■□□□□ 0.2
DUX4L28-201ENST00000623687 XAGE1AQ9HD64 81 aa16.31■□□□□ 0.2
DUX4L28-201ENST00000623687 UBE2BP63146 152 aa16.29■□□□□ 0.2
DUX4L28-201ENST00000623687 PMCHL1Q16048 86 aa16.29■□□□□ 0.2
DUX4L28-201ENST00000623687 HBDP02042 147 aa16.28■□□□□ 0.2
DUX4L28-201ENST00000623687 YPEL4Q96NS1 127 aa16.28■□□□□ 0.2
DUX4L28-201ENST00000623687 IGLC3P0DOY3 106 aa16.27■□□□□ 0.2
DUX4L28-201ENST00000623687 NDUFA6P56556 154 aa16.25■□□□□ 0.19
DUX4L28-201ENST00000623687 C22orf24Q9Y442 160 aa16.24■□□□□ 0.19
DUX4L28-201ENST00000623687 H3BRM9 83 aa16.23■□□□□ 0.19
DUX4L28-201ENST00000623687 RAB5BP61020 215 aa16.23■□□□□ 0.19
DUX4L28-201ENST00000623687 DIRC1Q969H9 104 aa16.23■□□□□ 0.19
DUX4L28-201ENST00000623687 ZNF22P17026 224 aaPredicted RBP16.21■□□□□ 0.19
DUX4L28-201ENST00000623687 IGLV5-39A0A0G2JS06 123 aa16.2■□□□□ 0.18
DUX4L28-201ENST00000623687 H0Y9J4 135 aa16.2■□□□□ 0.18
DUX4L28-201ENST00000623687 ATP5LO75964 103 aa16.18■□□□□ 0.18
DUX4L28-201ENST00000623687 LBHQ53QV2 105 aaPredicted RBP16.16■□□□□ 0.18
DUX4L28-201ENST00000623687 BAGE3Q86Y29 109 aa16.16■□□□□ 0.18
DUX4L28-201ENST00000623687 CBLN2Q8IUK8 224 aa16.16■□□□□ 0.18
DUX4L28-201ENST00000623687 TP73-AS1Q9UF72 201 aa16.16■□□□□ 0.18
DUX4L28-201ENST00000623687 C11orf86A6NJI1 115 aa16.15■□□□□ 0.18
DUX4L28-201ENST00000623687 UBR4Q5T4S7 5183 aa16.15■□□□□ 0.18
DUX4L28-201ENST00000623687 MRPL55Q7Z7F7 128 aaKnown RBP16.15■□□□□ 0.18
DUX4L28-201ENST00000623687 PRR26Q8N8Z3 221 aa16.13■□□□□ 0.17
DUX4L28-201ENST00000623687 CHCHD1Q96BP2 118 aaKnown RBP16.12■□□□□ 0.17
DUX4L28-201ENST00000623687 NUPR1O60356 82 aa16.11■□□□□ 0.17
DUX4L28-201ENST00000623687 KRTAP1-4P0C5Y4 121 aa16.11■□□□□ 0.17
DUX4L28-201ENST00000623687 PFN2P35080 140 aa16.09■□□□□ 0.17
DUX4L28-201ENST00000623687 TMEM170BQ5T4T1 132 aa16.09■□□□□ 0.17
DUX4L28-201ENST00000623687 LINC00167Q96N53 147 aa16.09■□□□□ 0.17
DUX4L28-201ENST00000623687 CHTOPQ9Y3Y2 248 aaKnown RBP16.09■□□□□ 0.17
DUX4L28-201ENST00000623687 IGLV5-37A0A075B6J1 123 aa16.08■□□□□ 0.16
DUX4L28-201ENST00000623687 ZNF861PO60384 105 aa16.08■□□□□ 0.16
DUX4L28-201ENST00000623687 RPL37AP8A6NKH3 93 aa16.06■□□□□ 0.16
DUX4L28-201ENST00000623687 ERG28Q9UKR5 140 aa16.06■□□□□ 0.16
DUX4L28-201ENST00000623687 GAGE10A6NGK3 116 aa16.05■□□□□ 0.16
DUX4L28-201ENST00000623687 IFI27L1Q96BM0 104 aa16.05■□□□□ 0.16
DUX4L28-201ENST00000623687 TRAV12-1A0A0B4J245 112 aa16.04■□□□□ 0.16
DUX4L28-201ENST00000623687 SLC7A5P1Q8MH63 180 aa16.04■□□□□ 0.16
DUX4L28-201ENST00000623687 ZNF625Q96I27 306 aaPredicted RBP16.04■□□□□ 0.16
DUX4L28-201ENST00000623687 IGLV1-50A0A075B6I6 118 aa16.02■□□□□ 0.16
DUX4L28-201ENST00000623687 BCE1O60756 84 aa16.02■□□□□ 0.16
DUX4L28-201ENST00000623687 TRGC2P03986 189 aa16.02■□□□□ 0.16
DUX4L28-201ENST00000623687 FAM19A2Q8N3H0 131 aa16.02■□□□□ 0.16
DUX4L28-201ENST00000623687 NKAPP1Q8N9T2 125 aa16.02■□□□□ 0.16
DUX4L28-201ENST00000623687 SND1-IT1Q9HBX3 110 aa16.02■□□□□ 0.16
DUX4L28-201ENST00000623687 LRP2P98164 4655 aa16.01■□□□□ 0.15
DUX4L28-201ENST00000623687 HSBP1O75506 76 aa16.01■□□□□ 0.15
DUX4L28-201ENST00000623687 SCO1O75880 301 aa16.01■□□□□ 0.15
DUX4L28-201ENST00000623687 TMEM223A0PJW6 202 aa16■□□□□ 0.15
DUX4L28-201ENST00000623687 COX17Q14061 63 aa16■□□□□ 0.15
DUX4L28-201ENST00000623687 SFTA2Q6UW10 78 aa15.98■□□□□ 0.15
DUX4L28-201ENST00000623687 VPREB1P12018 145 aa15.97■□□□□ 0.15
DUX4L28-201ENST00000623687 RPL28P46779 137 aaKnown RBP15.97■□□□□ 0.15
DUX4L28-201ENST00000623687 LINC00310P59036 64 aa15.97■□□□□ 0.15
DUX4L28-201ENST00000623687 Q8NDZ9 215 aa15.95■□□□□ 0.14
DUX4L28-201ENST00000623687 IGKV2-28A0A075B6P5 120 aa15.94■□□□□ 0.14
DUX4L28-201ENST00000623687 IGKV2D-28P01615 120 aa15.94■□□□□ 0.14
DUX4L28-201ENST00000623687 SERF1AO75920 110 aa15.93■□□□□ 0.14
DUX4L28-201ENST00000623687 KRTAP13-1Q8IUC0 172 aa15.92■□□□□ 0.14
DUX4L28-201ENST00000623687 RPL13AP40429 203 aaKnown RBP15.91■□□□□ 0.14
DUX4L28-201ENST00000623687 COLCA2A8K830 154 aa15.9■□□□□ 0.14
DUX4L28-201ENST00000623687 RPL24P83731 157 aaKnown RBP15.9■□□□□ 0.14
DUX4L28-201ENST00000623687 A0A0U1RRA0 63 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms