RNA–Protein interactions for RNA: ENST00000621747.5

VEGFA-229, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-229ENST00000621747 RHEBQ15382 184 aa15.5■□□□□ 0.07
VEGFA-229ENST00000621747 C10orf91Q5T1B1 145 aa15.5■□□□□ 0.07
VEGFA-229ENST00000621747 CDKN2A-AS1Q9UH64 79 aa15.5■□□□□ 0.07
VEGFA-229ENST00000621747 RPS10P5Q9NQ39 176 aa15.49■□□□□ 0.07
VEGFA-229ENST00000621747 LINC01546A6NGU7 62 aa15.48■□□□□ 0.07
VEGFA-229ENST00000621747 MRPL18Q9H0U6 180 aaKnown RBP15.48■□□□□ 0.07
VEGFA-229ENST00000621747 CARHSP1Q9Y2V2 147 aaKnown RBP15.48■□□□□ 0.07
VEGFA-229ENST00000621747 FABP9Q0Z7S8 132 aa15.47■□□□□ 0.07
VEGFA-229ENST00000621747 FA2HQ7L5A8 372 aa15.46■□□□□ 0.07
VEGFA-229ENST00000621747 SMCO4Q9NRQ5 59 aa15.46■□□□□ 0.07
VEGFA-229ENST00000621747 M0QXV9 152 aa15.45■□□□□ 0.06
VEGFA-229ENST00000621747 LINC00469Q8N7U9 141 aa15.45■□□□□ 0.06
VEGFA-229ENST00000621747 KRTAP10-8P60410 259 aa15.44■□□□□ 0.06
VEGFA-229ENST00000621747 C9orf129Q5T035 196 aaKnown RBP15.44■□□□□ 0.06
VEGFA-229ENST00000621747 TINCRA0A1B0GVN0 87 aa15.43■□□□□ 0.06
VEGFA-229ENST00000621747 IGLV7-43P04211 117 aa15.43■□□□□ 0.06
VEGFA-229ENST00000621747 UBE2BP63146 152 aa15.43■□□□□ 0.06
VEGFA-229ENST00000621747 F8VRH5 84 aa15.42■□□□□ 0.06
VEGFA-229ENST00000621747 CXCL5P42830 114 aa15.42■□□□□ 0.06
VEGFA-229ENST00000621747 KRTAP7-1Q8IUC3 87 aa15.42■□□□□ 0.06
VEGFA-229ENST00000621747 KRTAP11-1Q8IUC1 163 aa15.4■□□□□ 0.06
VEGFA-229ENST00000621747 DIRC1Q969H9 104 aa15.4■□□□□ 0.06
VEGFA-229ENST00000621747 CST9LQ9H4G1 147 aa15.4■□□□□ 0.06
VEGFA-229ENST00000621747 IGLV5-45A0A087WSX0 123 aa15.39■□□□□ 0.05
VEGFA-229ENST00000621747 SMIM1B2RUZ4 78 aa15.39■□□□□ 0.05
VEGFA-229ENST00000621747 PMVKQ15126 192 aa15.39■□□□□ 0.05
VEGFA-229ENST00000621747 PDZD11Q5EBL8 140 aa15.39■□□□□ 0.05
VEGFA-229ENST00000621747 COX7B2Q8TF08 81 aa15.36■□□□□ 0.05
VEGFA-229ENST00000621747 TRAPPC1Q9Y5R8 145 aa15.36■□□□□ 0.05
VEGFA-229ENST00000621747 XAGE1AQ9HD64 81 aa15.35■□□□□ 0.05
VEGFA-229ENST00000621747 APOC3P02656 99 aa15.33■□□□□ 0.04
VEGFA-229ENST00000621747 ODF1Q14990 250 aa15.33■□□□□ 0.04
VEGFA-229ENST00000621747 NDUFA5Q16718 116 aa15.33■□□□□ 0.04
VEGFA-229ENST00000621747 H0Y9J4 135 aa15.32■□□□□ 0.04
VEGFA-229ENST00000621747 H3BRM9 83 aa15.32■□□□□ 0.04
VEGFA-229ENST00000621747 SPINK8P0C7L1 97 aa15.32■□□□□ 0.04
VEGFA-229ENST00000621747 C22orf24Q9Y442 160 aa15.32■□□□□ 0.04
VEGFA-229ENST00000621747 SNAPINO95295 136 aa15.31■□□□□ 0.04
VEGFA-229ENST00000621747 LINC00614P0C842 121 aa15.31■□□□□ 0.04
VEGFA-229ENST00000621747 LBHQ53QV2 105 aaPredicted RBP15.31■□□□□ 0.04
VEGFA-229ENST00000621747 SVBPQ8N300 66 aa15.31■□□□□ 0.04
VEGFA-229ENST00000621747 C18orf32Q8TCD1 76 aa15.31■□□□□ 0.04
VEGFA-229ENST00000621747 NDUFA6P56556 154 aa15.28■□□□□ 0.04
VEGFA-229ENST00000621747 A0A096LNJ9 63 aa15.27■□□□□ 0.04
VEGFA-229ENST00000621747 HBDP02042 147 aa15.27■□□□□ 0.04
VEGFA-229ENST00000621747 IGLC3P0DOY3 106 aa15.27■□□□□ 0.04
VEGFA-229ENST00000621747 URB1-AS1Q96HZ7 61 aa15.27■□□□□ 0.04
VEGFA-229ENST00000621747 TP73-AS1Q9UF72 201 aa15.27■□□□□ 0.04
VEGFA-229ENST00000621747 NUPR1O60356 82 aa15.26■□□□□ 0.03
VEGFA-229ENST00000621747 RAB5BP61020 215 aa15.26■□□□□ 0.03
VEGFA-229ENST00000621747 ATP5LO75964 103 aa15.24■□□□□ 0.03
VEGFA-229ENST00000621747 MRPL55Q7Z7F7 128 aaKnown RBP15.24■□□□□ 0.03
VEGFA-229ENST00000621747 UBR4Q5T4S7 5183 aa15.24■□□□□ 0.03
VEGFA-229ENST00000621747 PRR26Q8N8Z3 221 aa15.23■□□□□ 0.03
VEGFA-229ENST00000621747 PMCHL1Q16048 86 aa15.22■□□□□ 0.03
VEGFA-229ENST00000621747 ZNF861PO60384 105 aa15.21■□□□□ 0.03
VEGFA-229ENST00000621747 IGLV1-50A0A075B6I6 118 aa15.2■□□□□ 0.02
VEGFA-229ENST00000621747 IGLV5-39A0A0G2JS06 123 aa15.2■□□□□ 0.02
VEGFA-229ENST00000621747 ZNF22P17026 224 aaPredicted RBP15.2■□□□□ 0.02
VEGFA-229ENST00000621747 KRTAP1-4P0C5Y4 121 aa15.17■□□□□ 0.02
VEGFA-229ENST00000621747 BAGE3Q86Y29 109 aa15.17■□□□□ 0.02
VEGFA-229ENST00000621747 LINC00167Q96N53 147 aa15.16■□□□□ 0.02
VEGFA-229ENST00000621747 NKAPP1Q8N9T2 125 aa15.15■□□□□ 0.02
VEGFA-229ENST00000621747 IGLV5-37A0A075B6J1 123 aa15.14■□□□□ 0.01
VEGFA-229ENST00000621747 BCE1O60756 84 aa15.14■□□□□ 0.01
VEGFA-229ENST00000621747 PFN2P35080 140 aa15.14■□□□□ 0.01
VEGFA-229ENST00000621747 TMEM170BQ5T4T1 132 aa15.14■□□□□ 0.01
VEGFA-229ENST00000621747 YPEL4Q96NS1 127 aa15.14■□□□□ 0.01
VEGFA-229ENST00000621747 C11orf86A6NJI1 115 aa15.13■□□□□ 0.01
VEGFA-229ENST00000621747 RPL37AP8A6NKH3 93 aa15.13■□□□□ 0.01
VEGFA-229ENST00000621747 RPL13AP40429 203 aaKnown RBP15.13■□□□□ 0.01
VEGFA-229ENST00000621747 CHCHD1Q96BP2 118 aaKnown RBP15.13■□□□□ 0.01
VEGFA-229ENST00000621747 RPL28P46779 137 aaKnown RBP15.12■□□□□ 0.01
VEGFA-229ENST00000621747 GAGE10A6NGK3 116 aa15.11■□□□□ 0.01
VEGFA-229ENST00000621747 SFTA2Q6UW10 78 aa15.11■□□□□ 0.01
VEGFA-229ENST00000621747 ERG28Q9UKR5 140 aa15.11■□□□□ 0.01
VEGFA-229ENST00000621747 COX17Q14061 63 aa15.1■□□□□ 0.01
VEGFA-229ENST00000621747 CHTOPQ9Y3Y2 248 aaKnown RBP15.1■□□□□ 0.01
VEGFA-229ENST00000621747 LRP2P98164 4655 aa15.1■□□□□ 0.01
VEGFA-229ENST00000621747 IFI27L1Q96BM0 104 aa15.07■□□□□ 0
VEGFA-229ENST00000621747 SND1-IT1Q9HBX3 110 aa15.07■□□□□ 0
VEGFA-229ENST00000621747 TRAV12-1A0A0B4J245 112 aa15.06■□□□□ 0
VEGFA-229ENST00000621747 ZNF625Q96I27 306 aaPredicted RBP15.06■□□□□ 0
VEGFA-229ENST00000621747 CBLN2Q8IUK8 224 aa15.04■□□□□ -0
VEGFA-229ENST00000621747 RPL24P83731 157 aaKnown RBP15.03■□□□□ -0
VEGFA-229ENST00000621747 IGKV2-28A0A075B6P5 120 aa15.02■□□□□ -0
VEGFA-229ENST00000621747 IGKV2D-28P01615 120 aa15.02■□□□□ -0
VEGFA-229ENST00000621747 UBE2AP49459 152 aa15.02■□□□□ -0
VEGFA-229ENST00000621747 HSBP1O75506 76 aa15.01□□□□□ -0.01
VEGFA-229ENST00000621747 SCO1O75880 301 aa15.01□□□□□ -0.01
VEGFA-229ENST00000621747 VPREB1P12018 145 aa15.01□□□□□ -0.01
VEGFA-229ENST00000621747 TMEM223A0PJW6 202 aa15□□□□□ -0.01
VEGFA-229ENST00000621747 LINC00158P58513 81 aa14.97□□□□□ -0.01
VEGFA-229ENST00000621747 KRTAP13-1Q8IUC0 172 aa14.97□□□□□ -0.01
VEGFA-229ENST00000621747 FAM19A2Q8N3H0 131 aa14.97□□□□□ -0.01
VEGFA-229ENST00000621747 TRGC2P03986 189 aa14.96□□□□□ -0.01
VEGFA-229ENST00000621747 CRYGAP11844 174 aa14.95□□□□□ -0.02
VEGFA-229ENST00000621747 A0A087X002 238 aa14.93□□□□□ -0.02
VEGFA-229ENST00000621747 TMEM126AQ9H061 195 aa14.93□□□□□ -0.02
VEGFA-229ENST00000621747 A0A0U1RRA0 63 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms