RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 ATOH7Q8N100 152 aa3.01□□□□□ -1.93
SYCP1-210ENST00000618516 CHCHD1Q96BP2 118 aaKnown RBP3.01□□□□□ -1.93
SYCP1-210ENST00000618516 GAGE10A6NGK3 116 aa3.01□□□□□ -1.93
SYCP1-210ENST00000618516 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.01□□□□□ -1.93
SYCP1-210ENST00000618516 PRSS2P07478 247 aa3.01□□□□□ -1.93
SYCP1-210ENST00000618516 NPC2P61916 151 aa3.01□□□□□ -1.93
SYCP1-210ENST00000618516 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.01□□□□□ -1.93
SYCP1-210ENST00000618516 A0A1B0GVY2 172 aa3□□□□□ -1.93
SYCP1-210ENST00000618516 SCGB1D1O95968 90 aa3□□□□□ -1.93
SYCP1-210ENST00000618516 Q6ZRU5 148 aa3□□□□□ -1.93
SYCP1-210ENST00000618516 C15orf56Q8N910 161 aa3□□□□□ -1.93
SYCP1-210ENST00000618516 COX11Q9Y6N1 276 aa3□□□□□ -1.93
SYCP1-210ENST00000618516 TRAV16A0A0A6YYK6 109 aaPredicted RBP3□□□□□ -1.93
SYCP1-210ENST00000618516 A0A1B0GUV1 79 aa3□□□□□ -1.93
SYCP1-210ENST00000618516 SCGB1A1P11684 91 aa3□□□□□ -1.93
SYCP1-210ENST00000618516 TIRAPP58753 221 aa3□□□□□ -1.93
SYCP1-210ENST00000618516 KRTDAPP60985 99 aa3□□□□□ -1.93
SYCP1-210ENST00000618516 CKS1BP61024 79 aa3□□□□□ -1.93
SYCP1-210ENST00000618516 FOXI1Q12951 378 aa3□□□□□ -1.93
SYCP1-210ENST00000618516 LINC00242Q5T6M2 205 aa3□□□□□ -1.93
SYCP1-210ENST00000618516 CFAP161Q6P656 301 aa3□□□□□ -1.93
SYCP1-210ENST00000618516 SCXQ7RTU7 201 aa3□□□□□ -1.93
SYCP1-210ENST00000618516 FAM19A5Q7Z5A7 132 aaPredicted RBP3□□□□□ -1.93
SYCP1-210ENST00000618516 NTN5Q8WTR8 489 aaPredicted RBP3□□□□□ -1.93
SYCP1-210ENST00000618516 URB1-AS1Q96HZ7 61 aa3□□□□□ -1.93
SYCP1-210ENST00000618516 KRTAP17-1Q9BYP8 105 aa3□□□□□ -1.93
SYCP1-210ENST00000618516 PRR34Q9NV39 138 aa3□□□□□ -1.93
SYCP1-210ENST00000618516 LAMTOR2Q9Y2Q5 125 aa3□□□□□ -1.93
SYCP1-210ENST00000618516 HBDP02042 147 aa2.99□□□□□ -1.93
SYCP1-210ENST00000618516 BOD1L2Q8IYS8 172 aa2.99□□□□□ -1.93
SYCP1-210ENST00000618516 STPG4Q8N801 248 aa2.99□□□□□ -1.93
SYCP1-210ENST00000618516 CHAC1Q9BUX1 264 aa2.99□□□□□ -1.93
SYCP1-210ENST00000618516 KRTAP4-2Q9BYR5 136 aa2.99□□□□□ -1.93
SYCP1-210ENST00000618516 FAM168BA1KXE4 195 aa2.99□□□□□ -1.93
SYCP1-210ENST00000618516 XGP55808 180 aa2.99□□□□□ -1.93
SYCP1-210ENST00000618516 CD164L2Q6UWJ8 174 aa2.99□□□□□ -1.93
SYCP1-210ENST00000618516 CIRBP-AS1Q8TBR5 109 aa2.99□□□□□ -1.93
SYCP1-210ENST00000618516 CHTOPQ9Y3Y2 248 aaKnown RBP2.99□□□□□ -1.93
SYCP1-210ENST00000618516 TRAV8-4A0A0B4J246 113 aa2.99□□□□□ -1.93
SYCP1-210ENST00000618516 LEPROTL1O95214 131 aa2.99□□□□□ -1.93
SYCP1-210ENST00000618516 SEC11AP67812 179 aa2.99□□□□□ -1.93
SYCP1-210ENST00000618516 SYCNQ0VAF6 134 aa2.99□□□□□ -1.93
SYCP1-210ENST00000618516 DAND5Q8N907 189 aa2.99□□□□□ -1.93
SYCP1-210ENST00000618516 FAM104AQ969W3 186 aa2.99□□□□□ -1.93
SYCP1-210ENST00000618516 CARD19Q96LW7 228 aa2.99□□□□□ -1.93
SYCP1-210ENST00000618516 PGPEP1Q9NXJ5 209 aa2.99□□□□□ -1.93
SYCP1-210ENST00000618516 A0A087WYN8 130 aa2.98□□□□□ -1.93
SYCP1-210ENST00000618516 A0A096LNI7 61 aa2.98□□□□□ -1.93
SYCP1-210ENST00000618516 A0A096LNJ9 63 aa2.98□□□□□ -1.93
SYCP1-210ENST00000618516 ATP5LO75964 103 aa2.98□□□□□ -1.93
SYCP1-210ENST00000618516 ODF1Q14990 250 aa2.98□□□□□ -1.93
SYCP1-210ENST00000618516 ERASQ7Z444 233 aa2.98□□□□□ -1.93
SYCP1-210ENST00000618516 IFI27L1Q96BM0 104 aa2.98□□□□□ -1.93
SYCP1-210ENST00000618516 SPANXA1Q9NS26 97 aa2.98□□□□□ -1.93
SYCP1-210ENST00000618516 MRPL35Q9NZE8 188 aaKnown RBP2.98□□□□□ -1.93
SYCP1-210ENST00000618516 IGIPA6NJ69 53 aa2.98□□□□□ -1.93
SYCP1-210ENST00000618516 HNRNPA3P51991 378 aaKnown RBP2.98□□□□□ -1.93
SYCP1-210ENST00000618516 TTTY13Q9BZ97 58 aa2.98□□□□□ -1.93
SYCP1-210ENST00000618516 HMCN1Q96RW7 5635 aa2.98□□□□□ -1.93
SYCP1-210ENST00000618516 LINC01546A6NGU7 62 aa2.97□□□□□ -1.93
SYCP1-210ENST00000618516 C11orf86A6NJI1 115 aa2.97□□□□□ -1.93
SYCP1-210ENST00000618516 NPSP0C0P6 89 aa2.97□□□□□ -1.93
SYCP1-210ENST00000618516 SPATA45Q537H7 98 aa2.97□□□□□ -1.93
SYCP1-210ENST00000618516 KRTAP26-1Q6PEX3 210 aa2.97□□□□□ -1.93
SYCP1-210ENST00000618516 TOMM6Q96B49 74 aa2.97□□□□□ -1.93
SYCP1-210ENST00000618516 CST9LQ9H4G1 147 aa2.97□□□□□ -1.93
SYCP1-210ENST00000618516 IGHV3OR16-9A0A0B4J2B5 98 aa2.97□□□□□ -1.93
SYCP1-210ENST00000618516 APOMO95445 188 aa2.97□□□□□ -1.93
SYCP1-210ENST00000618516 PCP4P48539 62 aa2.97□□□□□ -1.93
SYCP1-210ENST00000618516 UBE2D1P51668 147 aa2.97□□□□□ -1.93
SYCP1-210ENST00000618516 PMVKQ15126 192 aa2.97□□□□□ -1.93
SYCP1-210ENST00000618516 Q5VSD8 79 aa2.97□□□□□ -1.93
SYCP1-210ENST00000618516 FAT3Q8TDW7 4589 aa2.97□□□□□ -1.93
SYCP1-210ENST00000618516 IGHV1-58A0A0C4DH39 117 aa2.97□□□□□ -1.93
SYCP1-210ENST00000618516 RPL37AP8A6NKH3 93 aa2.97□□□□□ -1.93
SYCP1-210ENST00000618516 EPM2AB3EWF7 344 aa2.97□□□□□ -1.93
SYCP1-210ENST00000618516 C3orf79P0CE67 100 aa2.97□□□□□ -1.93
SYCP1-210ENST00000618516 SMAGPQ0VAQ4 97 aa2.97□□□□□ -1.93
SYCP1-210ENST00000618516 K7ERU9 68 aa2.96□□□□□ -1.94
SYCP1-210ENST00000618516 UBE2BP63146 152 aa2.96□□□□□ -1.94
SYCP1-210ENST00000618516 C14orf177Q52M58 125 aa2.96□□□□□ -1.94
SYCP1-210ENST00000618516 MEIG1Q5JSS6 88 aa2.96□□□□□ -1.94
SYCP1-210ENST00000618516 LINC00528Q8N1L1 170 aa2.96□□□□□ -1.94
SYCP1-210ENST00000618516 A0A087WZ39 114 aa2.96□□□□□ -1.94
SYCP1-210ENST00000618516 NDUFA1O15239 70 aa2.96□□□□□ -1.94
SYCP1-210ENST00000618516 LINC00158P58513 81 aa2.96□□□□□ -1.94
SYCP1-210ENST00000618516 TP73-AS1Q9UF72 201 aa2.96□□□□□ -1.94
SYCP1-210ENST00000618516 HSPB8Q9UJY1 196 aa2.96□□□□□ -1.94
SYCP1-210ENST00000618516 IGKV2-28A0A075B6P5 120 aa2.95□□□□□ -1.94
SYCP1-210ENST00000618516 HSBP1L1C9JCN9 74 aa2.95□□□□□ -1.94
SYCP1-210ENST00000618516 IGKV2D-28P01615 120 aa2.95□□□□□ -1.94
SYCP1-210ENST00000618516 PTTG1IPP53801 180 aa2.95□□□□□ -1.94
SYCP1-210ENST00000618516 PAPPA-AS1Q5QFB9 102 aa2.95□□□□□ -1.94
SYCP1-210ENST00000618516 LINC01545Q5VT33 79 aa2.95□□□□□ -1.94
SYCP1-210ENST00000618516 PHF5AQ7RTV0 110 aaKnown RBP2.95□□□□□ -1.94
SYCP1-210ENST00000618516 HIGD1BQ9P298 99 aa2.95□□□□□ -1.94
SYCP1-210ENST00000618516 C6orf48Q9UBA6 75 aa2.95□□□□□ -1.94
SYCP1-210ENST00000618516 H7C423 109 aa2.95□□□□□ -1.94
SYCP1-210ENST00000618516 NMUP48645 174 aa2.95□□□□□ -1.94
SYCP1-210ENST00000618516 PRR3P79522 188 aaKnown RBP2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms