RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 RETNQ9HD89 108 aa12.74□□□□□ -0.37
ATXN2-227ENST00000616825 NUPR2A6NF83 97 aa12.73□□□□□ -0.37
ATXN2-227ENST00000616825 IGLV4-60A0A075B6I1 120 aa12.73□□□□□ -0.37
ATXN2-227ENST00000616825 Q6ZTC4 211 aa12.73□□□□□ -0.37
ATXN2-227ENST00000616825 CSDC2Q9Y534 153 aaKnown RBP12.73□□□□□ -0.37
ATXN2-227ENST00000616825 COX8CQ7Z4L0 72 aa12.73□□□□□ -0.37
ATXN2-227ENST00000616825 MGAM2Q2M2H8 2515 aa12.72□□□□□ -0.37
ATXN2-227ENST00000616825 URB1-AS1Q96HZ7 61 aa12.72□□□□□ -0.37
ATXN2-227ENST00000616825 M0QXV9 152 aa12.72□□□□□ -0.37
ATXN2-227ENST00000616825 FHL2Q14192 279 aa12.72□□□□□ -0.37
ATXN2-227ENST00000616825 FAM240AA0A1B0GVK7 77 aa12.71□□□□□ -0.37
ATXN2-227ENST00000616825 RPL28P46779 137 aaKnown RBP12.71□□□□□ -0.37
ATXN2-227ENST00000616825 C9orf116Q5BN46 136 aaPredicted RBP12.71□□□□□ -0.37
ATXN2-227ENST00000616825 TRBV10-3A0A0K0K1G6 114 aa12.71□□□□□ -0.38
ATXN2-227ENST00000616825 NDUFC2-KCTD14E9PQ53 114 aa12.71□□□□□ -0.38
ATXN2-227ENST00000616825 C6orf223Q8N319 242 aa12.71□□□□□ -0.38
ATXN2-227ENST00000616825 LINC00694P0DN24 101 aa12.71□□□□□ -0.38
ATXN2-227ENST00000616825 V9GYY9 64 aa12.7□□□□□ -0.38
ATXN2-227ENST00000616825 EXPH5Q8NEV8 1989 aa12.7□□□□□ -0.38
ATXN2-227ENST00000616825 C16orf95Q9H693 158 aa12.69□□□□□ -0.38
ATXN2-227ENST00000616825 ATP5EP56381 51 aaPredicted RBP12.69□□□□□ -0.38
ATXN2-227ENST00000616825 BEAN1Q3B7T3 259 aa12.69□□□□□ -0.38
ATXN2-227ENST00000616825 SNURFQ9Y675 71 aa12.69□□□□□ -0.38
ATXN2-227ENST00000616825 ATRQ13535 2644 aa12.69□□□□□ -0.38
ATXN2-227ENST00000616825 PRR4Q16378 134 aa12.68□□□□□ -0.38
ATXN2-227ENST00000616825 MAST4O15021 2626 aa12.68□□□□□ -0.38
ATXN2-227ENST00000616825 ANKRD17O75179 2603 aaKnown RBP12.67□□□□□ -0.38
ATXN2-227ENST00000616825 MUC22E2RYF6 1773 aaPredicted RBP12.67□□□□□ -0.38
ATXN2-227ENST00000616825 C10orf25Q5T742 122 aa12.67□□□□□ -0.38
ATXN2-227ENST00000616825 LRP4O75096 1905 aa12.67□□□□□ -0.38
ATXN2-227ENST00000616825 C1orf137Q5JT78 98 aa12.67□□□□□ -0.38
ATXN2-227ENST00000616825 PRR15LQ9BU68 103 aa12.67□□□□□ -0.38
ATXN2-227ENST00000616825 MRPL55Q7Z7F7 128 aaKnown RBP12.67□□□□□ -0.38
ATXN2-227ENST00000616825 AMELXQ99217 191 aa12.66□□□□□ -0.38
ATXN2-227ENST00000616825 COX7CP15954 63 aa12.66□□□□□ -0.38
ATXN2-227ENST00000616825 XGP55808 180 aa12.66□□□□□ -0.38
ATXN2-227ENST00000616825 TET2Q6N021 2002 aaPredicted RBP12.66□□□□□ -0.38
ATXN2-227ENST00000616825 Q6JHZ5 121 aa12.66□□□□□ -0.38
ATXN2-227ENST00000616825 COX6A2Q02221 97 aa12.65□□□□□ -0.38
ATXN2-227ENST00000616825 Q8N814 137 aa12.65□□□□□ -0.38
ATXN2-227ENST00000616825 ATG2AQ2TAZ0 1938 aa12.64□□□□□ -0.39
ATXN2-227ENST00000616825 A0A1B0GUV1 79 aa12.64□□□□□ -0.39
ATXN2-227ENST00000616825 SERP1Q9Y6X1 66 aa12.64□□□□□ -0.39
ATXN2-227ENST00000616825 PRR3P79522 188 aaKnown RBP12.64□□□□□ -0.39
ATXN2-227ENST00000616825 TSPEAR-AS2P59090 65 aa12.62□□□□□ -0.39
ATXN2-227ENST00000616825 REG3GQ6UW15 175 aa12.61□□□□□ -0.39
ATXN2-227ENST00000616825 CELA1Q9UNI1 258 aa12.61□□□□□ -0.39
ATXN2-227ENST00000616825 ADAMTSL4-AS1Q5T5F5 129 aa12.6□□□□□ -0.39
ATXN2-227ENST00000616825 A0A096LNJ9 63 aa12.59□□□□□ -0.39
ATXN2-227ENST00000616825 C2orf48Q96LS8 159 aa12.58□□□□□ -0.4
ATXN2-227ENST00000616825 F8WDY8 70 aa12.58□□□□□ -0.4
ATXN2-227ENST00000616825 Q6ZSN1 163 aa12.58□□□□□ -0.4
ATXN2-227ENST00000616825 IGLV5-52A0A0A0MRZ9 124 aa12.57□□□□□ -0.4
ATXN2-227ENST00000616825 A6NED7 52 aa12.57□□□□□ -0.4
ATXN2-227ENST00000616825 LYPD5Q6UWN5 251 aa12.57□□□□□ -0.4
ATXN2-227ENST00000616825 CIRBP-AS1Q8TBR5 109 aa12.57□□□□□ -0.4
ATXN2-227ENST00000616825 FAM30AQ9NZY2 134 aa12.56□□□□□ -0.4
ATXN2-227ENST00000616825 LINC00208Q96KT6 92 aa12.56□□□□□ -0.4
ATXN2-227ENST00000616825 RAI1Q7Z5J4 1906 aaPredicted RBP12.55□□□□□ -0.4
ATXN2-227ENST00000616825 TRAV7A0A075B6U4 112 aa12.54□□□□□ -0.4
ATXN2-227ENST00000616825 Q6Q795 121 aa12.54□□□□□ -0.4
ATXN2-227ENST00000616825 A0A0U1RQV1 116 aa12.53□□□□□ -0.4
ATXN2-227ENST00000616825 A0A087WYN8 130 aa12.53□□□□□ -0.4
ATXN2-227ENST00000616825 LINC01556Q5JQF7 62 aa12.53□□□□□ -0.4
ATXN2-227ENST00000616825 PRRC2CQ9Y520 2896 aaKnown RBP12.53□□□□□ -0.4
ATXN2-227ENST00000616825 CCDC179H3BU77 68 aa12.52□□□□□ -0.41
ATXN2-227ENST00000616825 ESRGQ1W209 222 aa12.52□□□□□ -0.41
ATXN2-227ENST00000616825 Q6ZVQ6 151 aa12.52□□□□□ -0.41
ATXN2-227ENST00000616825 LINC01561Q8N1V8 128 aa12.51□□□□□ -0.41
ATXN2-227ENST00000616825 PTPRSQ13332 1948 aa12.51□□□□□ -0.41
ATXN2-227ENST00000616825 A0A087WSZ3 146 aa12.5□□□□□ -0.41
ATXN2-227ENST00000616825 LINC01547P58512 204 aaPredicted RBP12.5□□□□□ -0.41
ATXN2-227ENST00000616825 C1orf134Q5TEV5 83 aa12.5□□□□□ -0.41
ATXN2-227ENST00000616825 Q9BRP9 147 aa12.5□□□□□ -0.41
ATXN2-227ENST00000616825 A0A087WVE0 104 aa12.49□□□□□ -0.41
ATXN2-227ENST00000616825 Q8N3U1 123 aa12.49□□□□□ -0.41
ATXN2-227ENST00000616825 KIF25-AS1Q9Y6Z4 181 aa12.49□□□□□ -0.41
ATXN2-227ENST00000616825 HECTD1Q9ULT8 2610 aa12.49□□□□□ -0.41
ATXN2-227ENST00000616825 PRYO14603 147 aa12.49□□□□□ -0.41
ATXN2-227ENST00000616825 LINC00575Q6W349 94 aa12.49□□□□□ -0.41
ATXN2-227ENST00000616825 IGHV6-1A0A0B4J1U7 121 aa12.48□□□□□ -0.41
ATXN2-227ENST00000616825 Q6ZRU5 148 aa12.48□□□□□ -0.41
ATXN2-227ENST00000616825 SMIM26A0A096LP01 95 aa12.47□□□□□ -0.41
ATXN2-227ENST00000616825 FSHBP01225 129 aa12.46□□□□□ -0.41
ATXN2-227ENST00000616825 NHLRC4P0CG21 123 aaPredicted RBP12.46□□□□□ -0.41
ATXN2-227ENST00000616825 Q8N2B8 174 aa12.46□□□□□ -0.42
ATXN2-227ENST00000616825 FHL3Q13643 280 aa12.45□□□□□ -0.42
ATXN2-227ENST00000616825 C11orf72Q8NBR9 251 aa12.44□□□□□ -0.42
ATXN2-227ENST00000616825 COL5A1P20908 1838 aaPredicted RBP12.44□□□□□ -0.42
ATXN2-227ENST00000616825 IGHV3OR16-9A0A0B4J2B5 98 aa12.43□□□□□ -0.42
ATXN2-227ENST00000616825 LINC00337Q8N6G1 96 aa12.43□□□□□ -0.42
ATXN2-227ENST00000616825 CPAMD8Q8IZJ3 1885 aa12.43□□□□□ -0.42
ATXN2-227ENST00000616825 A8MTW9 85 aa12.42□□□□□ -0.42
ATXN2-227ENST00000616825 TRBV7-6A0A0J9YX20 115 aa12.41□□□□□ -0.42
ATXN2-227ENST00000616825 ADAMTS20P59510 1910 aa12.39□□□□□ -0.43
ATXN2-227ENST00000616825 IGLV5-39A0A0G2JS06 123 aa12.39□□□□□ -0.43
ATXN2-227ENST00000616825 PRLHP81277 87 aa12.39□□□□□ -0.43
ATXN2-227ENST00000616825 C22orf24Q9Y442 160 aa12.38□□□□□ -0.43
ATXN2-227ENST00000616825 LINC00315P59091 139 aa12.36□□□□□ -0.43
ATXN2-227ENST00000616825 LINC00846Q9NV44 126 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms