RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 FAM19A1Q7Z5A9 133 aa9.37□□□□□ -0.91
MSH6-214ENST00000616033 COPS9Q8WXC6 57 aa9.37□□□□□ -0.91
MSH6-214ENST00000616033 LINC00474Q9P2X8 69 aa9.37□□□□□ -0.91
MSH6-214ENST00000616033 TRAV13-2A0A0B4J235 113 aa9.36□□□□□ -0.91
MSH6-214ENST00000616033 IGLV5-39A0A0G2JS06 123 aa9.36□□□□□ -0.91
MSH6-214ENST00000616033 BEAN1Q3B7T3 259 aa9.36□□□□□ -0.91
MSH6-214ENST00000616033 HECTD1Q9ULT8 2610 aa9.36□□□□□ -0.91
MSH6-214ENST00000616033 IGKV2-28A0A075B6P5 120 aa9.35□□□□□ -0.91
MSH6-214ENST00000616033 IGKV2D-28P01615 120 aa9.35□□□□□ -0.91
MSH6-214ENST00000616033 COX7B2Q8TF08 81 aa9.35□□□□□ -0.91
MSH6-214ENST00000616033 C11orf72Q8NBR9 251 aa9.35□□□□□ -0.91
MSH6-214ENST00000616033 LINC01600Q96MT4 127 aa9.35□□□□□ -0.91
MSH6-214ENST00000616033 CCL18P55774 89 aa9.35□□□□□ -0.91
MSH6-214ENST00000616033 WFDC10AQ9H1F0 79 aa9.35□□□□□ -0.91
MSH6-214ENST00000616033 CDC42SE2Q9NRR3 84 aa9.35□□□□□ -0.91
MSH6-214ENST00000616033 HELZ2Q9BYK8 2649 aaKnown RBP9.34□□□□□ -0.91
MSH6-214ENST00000616033 B4DSR2 109 aa9.34□□□□□ -0.91
MSH6-214ENST00000616033 XCL1P47992 114 aa9.34□□□□□ -0.91
MSH6-214ENST00000616033 SS18Q15532 418 aa9.34□□□□□ -0.91
MSH6-214ENST00000616033 C6orf226Q5I0X4 101 aa9.34□□□□□ -0.91
MSH6-214ENST00000616033 ENHOQ6UWT2 76 aa9.34□□□□□ -0.91
MSH6-214ENST00000616033 TMEM89A2RUT3 159 aa9.34□□□□□ -0.91
MSH6-214ENST00000616033 IL17DQ8TAD2 202 aa9.34□□□□□ -0.91
MSH6-214ENST00000616033 K7EQD1 137 aa9.33□□□□□ -0.92
MSH6-214ENST00000616033 LINC01561Q8N1V8 128 aa9.33□□□□□ -0.92
MSH6-214ENST00000616033 IGLV4-60A0A075B6I1 120 aa9.33□□□□□ -0.92
MSH6-214ENST00000616033 IGLV5-45A0A087WSX0 123 aa9.33□□□□□ -0.92
MSH6-214ENST00000616033 TRGV4A0A0C4DH28 118 aa9.33□□□□□ -0.92
MSH6-214ENST00000616033 RPS28P62857 69 aaKnown RBP9.33□□□□□ -0.92
MSH6-214ENST00000616033 PRO0628Q9UI54 55 aa9.32□□□□□ -0.92
MSH6-214ENST00000616033 V9GYY9 64 aa9.32□□□□□ -0.92
MSH6-214ENST00000616033 AKAP9Q99996 3911 aa9.31□□□□□ -0.92
MSH6-214ENST00000616033 LRCOL1A6NCL2 159 aa9.31□□□□□ -0.92
MSH6-214ENST00000616033 NBPF19A0A087WUL8 3843 aa9.3□□□□□ -0.92
MSH6-214ENST00000616033 DEFB130BP0DP73 79 aa9.3□□□□□ -0.92
MSH6-214ENST00000616033 DEFB130AP0DP74 79 aa9.3□□□□□ -0.92
MSH6-214ENST00000616033 RPL28P46779 137 aaKnown RBP9.3□□□□□ -0.92
MSH6-214ENST00000616033 C1orf195Q5TG92 126 aa9.3□□□□□ -0.92
MSH6-214ENST00000616033 C1orf158Q8N1D5 194 aa9.3□□□□□ -0.92
MSH6-214ENST00000616033 ZNF843Q8N446 348 aa9.3□□□□□ -0.92
MSH6-214ENST00000616033 FLNAP21333 2647 aaKnown RBP9.29□□□□□ -0.92
MSH6-214ENST00000616033 IGLV10-54A0A075B6I4 117 aa9.29□□□□□ -0.92
MSH6-214ENST00000616033 A8MTW9 85 aa9.29□□□□□ -0.92
MSH6-214ENST00000616033 RMI2Q96E14 147 aa9.29□□□□□ -0.92
MSH6-214ENST00000616033 ITPR2Q14571 2701 aa9.29□□□□□ -0.92
MSH6-214ENST00000616033 ITPR3Q14573 2671 aa9.28□□□□□ -0.92
MSH6-214ENST00000616033 HAMPP81172 84 aa9.27□□□□□ -0.92
MSH6-214ENST00000616033 SCXQ7RTU7 201 aa9.27□□□□□ -0.92
MSH6-214ENST00000616033 ORMDL1Q9P0S3 153 aa9.27□□□□□ -0.92
MSH6-214ENST00000616033 ZNF702PQ9H963 129 aa9.27□□□□□ -0.93
MSH6-214ENST00000616033 ODF3L2Q3SX64 289 aa9.27□□□□□ -0.93
MSH6-214ENST00000616033 ESM1Q9NQ30 184 aa9.27□□□□□ -0.93
MSH6-214ENST00000616033 FAM222AQ5U5X8 452 aa9.26□□□□□ -0.93
MSH6-214ENST00000616033 DEFB114Q30KQ6 69 aa9.26□□□□□ -0.93
MSH6-214ENST00000616033 C9orf116Q5BN46 136 aaPredicted RBP9.25□□□□□ -0.93
MSH6-214ENST00000616033 UPK3BQ9BT76 320 aa9.25□□□□□ -0.93
MSH6-214ENST00000616033 H0YGX0 51 aa9.24□□□□□ -0.93
MSH6-214ENST00000616033 TENM4Q6N022 2769 aa9.24□□□□□ -0.93
MSH6-214ENST00000616033 TMEM86BQ8N661 226 aa9.24□□□□□ -0.93
MSH6-214ENST00000616033 F8WEM9 126 aa9.24□□□□□ -0.93
MSH6-214ENST00000616033 LINC00482Q8N8I6 264 aa9.24□□□□□ -0.93
MSH6-214ENST00000616033 DAD1P61803 113 aa9.23□□□□□ -0.93
MSH6-214ENST00000616033 LAMTOR3Q9UHA4 124 aa9.23□□□□□ -0.93
MSH6-214ENST00000616033 Q6JHZ5 121 aa9.22□□□□□ -0.93
MSH6-214ENST00000616033 LINC01356Q8N9X3 169 aa9.22□□□□□ -0.93
MSH6-214ENST00000616033 PF4P02776 101 aa9.22□□□□□ -0.93
MSH6-214ENST00000616033 UBR5O95071 2799 aaPredicted RBP9.22□□□□□ -0.93
MSH6-214ENST00000616033 OVOL2Q9BRP0 275 aa9.21□□□□□ -0.94
MSH6-214ENST00000616033 ZNF469Q96JG9 3925 aaPredicted RBP9.21□□□□□ -0.94
MSH6-214ENST00000616033 A0A087WZ39 114 aa9.2□□□□□ -0.94
MSH6-214ENST00000616033 TRBV10-1A0A0K0K1A3 114 aa9.19□□□□□ -0.94
MSH6-214ENST00000616033 C6orf99Q4VX62 202 aa9.19□□□□□ -0.94
MSH6-214ENST00000616033 IGHV3OR16-9A0A0B4J2B5 98 aa9.19□□□□□ -0.94
MSH6-214ENST00000616033 UBL5Q9BZL1 73 aa9.19□□□□□ -0.94
MSH6-214ENST00000616033 F8WDY8 70 aa9.18□□□□□ -0.94
MSH6-214ENST00000616033 LINC00269Q8N2A0 174 aa9.18□□□□□ -0.94
MSH6-214ENST00000616033 Q8N3U1 123 aa9.18□□□□□ -0.94
MSH6-214ENST00000616033 RETNQ9HD89 108 aa9.18□□□□□ -0.94
MSH6-214ENST00000616033 F8P00451 2351 aa9.18□□□□□ -0.94
MSH6-214ENST00000616033 DEFB4AO15263 64 aa9.18□□□□□ -0.94
MSH6-214ENST00000616033 CCKP06307 115 aa9.18□□□□□ -0.94
MSH6-214ENST00000616033 TRBV6-4A0A1B0GX49 114 aa9.18□□□□□ -0.94
MSH6-214ENST00000616033 CR1P17927 2039 aa9.18□□□□□ -0.94
MSH6-214ENST00000616033 TRBV6-8A0A0A6YYG3 113 aa9.17□□□□□ -0.94
MSH6-214ENST00000616033 IBA57-AS1B1ANH7 110 aa9.17□□□□□ -0.94
MSH6-214ENST00000616033 M0R2N4 97 aa9.17□□□□□ -0.94
MSH6-214ENST00000616033 FP248Q71RG6 208 aaPredicted RBP9.17□□□□□ -0.94
MSH6-214ENST00000616033 FLNBO75369 2602 aaKnown RBP9.17□□□□□ -0.94
MSH6-214ENST00000616033 LINC00959A0A1B0GUT2 108 aa9.16□□□□□ -0.94
MSH6-214ENST00000616033 TRAV10A0A0B4J240 114 aa9.15□□□□□ -0.94
MSH6-214ENST00000616033 GYPEP15421 78 aa9.15□□□□□ -0.94
MSH6-214ENST00000616033 Q6YL49 198 aa9.15□□□□□ -0.94
MSH6-214ENST00000616033 Q8N814 137 aa9.15□□□□□ -0.94
MSH6-214ENST00000616033 TRBV7-6A0A0J9YX20 115 aa9.14□□□□□ -0.95
MSH6-214ENST00000616033 CCL24O00175 119 aa9.14□□□□□ -0.95
MSH6-214ENST00000616033 SPATA3Q8NHX4 192 aa9.14□□□□□ -0.95
MSH6-214ENST00000616033 NDUFC2O95298 119 aa9.13□□□□□ -0.95
MSH6-214ENST00000616033 LYPD5Q6UWN5 251 aa9.13□□□□□ -0.95
MSH6-214ENST00000616033 SERP1Q9Y6X1 66 aa9.13□□□□□ -0.95
MSH6-214ENST00000616033 DEFB113Q30KQ7 82 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms