RNA–Protein interactions for RNA: ENST00000613060.4

SLC6A6-204, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best) BASIC

Gene SLC6A6, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-204ENST00000613060 SOSTDC1Q6X4U4 206 aa8.59□□□□□ -1.03
SLC6A6-204ENST00000613060 FREM1Q5H8C1 2179 aa8.59□□□□□ -1.03
SLC6A6-204ENST00000613060 SHANK1Q9Y566 2161 aa8.59□□□□□ -1.04
SLC6A6-204ENST00000613060 C2orf16Q68DN1 1984 aa8.58□□□□□ -1.04
SLC6A6-204ENST00000613060 EIF4EBP1Q13541 118 aaPredicted RBP8.58□□□□□ -1.04
SLC6A6-204ENST00000613060 PRR9Q5T870 116 aa8.58□□□□□ -1.04
SLC6A6-204ENST00000613060 C11orf1Q9H5F2 150 aa8.58□□□□□ -1.04
SLC6A6-204ENST00000613060 SPATA3Q8NHX4 192 aa8.58□□□□□ -1.04
SLC6A6-204ENST00000613060 LINC00313P59037 77 aa8.58□□□□□ -1.04
SLC6A6-204ENST00000613060 PRR14LQ5THK1 2151 aa8.57□□□□□ -1.04
SLC6A6-204ENST00000613060 LYPD5Q6UWN5 251 aa8.57□□□□□ -1.04
SLC6A6-204ENST00000613060 C16orf95Q9H693 158 aa8.57□□□□□ -1.04
SLC6A6-204ENST00000613060 EP400Q96L91 3159 aa8.57□□□□□ -1.04
SLC6A6-204ENST00000613060 A0A1B0GU69 56 aa8.57□□□□□ -1.04
SLC6A6-204ENST00000613060 PHF5AQ7RTV0 110 aaKnown RBP8.57□□□□□ -1.04
SLC6A6-204ENST00000613060 BRWD1-AS2P59051 145 aa8.56□□□□□ -1.04
SLC6A6-204ENST00000613060 PSPHP1O15172 72 aa8.56□□□□□ -1.04
SLC6A6-204ENST00000613060 AVPP01185 164 aa8.56□□□□□ -1.04
SLC6A6-204ENST00000613060 VWA8A3KMH1 1905 aa8.56□□□□□ -1.04
SLC6A6-204ENST00000613060 Q6ZRP5 223 aa8.56□□□□□ -1.04
SLC6A6-204ENST00000613060 MED12LQ86YW9 2145 aa8.56□□□□□ -1.04
SLC6A6-204ENST00000613060 SMIM1B2RUZ4 78 aa8.55□□□□□ -1.04
SLC6A6-204ENST00000613060 C22orf24Q9Y442 160 aa8.55□□□□□ -1.04
SLC6A6-204ENST00000613060 IGLV5-37A0A075B6J1 123 aa8.54□□□□□ -1.04
SLC6A6-204ENST00000613060 Q8N3U1 123 aa8.54□□□□□ -1.04
SLC6A6-204ENST00000613060 CDSNQ15517 529 aa8.54□□□□□ -1.04
SLC6A6-204ENST00000613060 KRTAP24-1Q3LI83 254 aa8.54□□□□□ -1.04
SLC6A6-204ENST00000613060 LINC00315P59091 139 aa8.54□□□□□ -1.04
SLC6A6-204ENST00000613060 C11orf21Q9P2W6 132 aa8.54□□□□□ -1.04
SLC6A6-204ENST00000613060 SSBP3-AS1Q7Z2R9 100 aa8.53□□□□□ -1.04
SLC6A6-204ENST00000613060 CACNA1AO00555 2505 aa8.53□□□□□ -1.04
SLC6A6-204ENST00000613060 C1orf64Q8NEQ6 169 aa8.53□□□□□ -1.04
SLC6A6-204ENST00000613060 OBSL1O75147 1896 aa8.53□□□□□ -1.04
SLC6A6-204ENST00000613060 IGLV4-60A0A075B6I1 120 aa8.53□□□□□ -1.04
SLC6A6-204ENST00000613060 RBM12B-AS1Q9P1G2 102 aa8.52□□□□□ -1.05
SLC6A6-204ENST00000613060 Q6ZRU5 148 aa8.52□□□□□ -1.05
SLC6A6-204ENST00000613060 CSPG4Q6UVK1 2322 aa8.51□□□□□ -1.05
SLC6A6-204ENST00000613060 CCDC179H3BU77 68 aa8.51□□□□□ -1.05
SLC6A6-204ENST00000613060 PTPN13Q12923 2485 aa8.51□□□□□ -1.05
SLC6A6-204ENST00000613060 FAM19A4Q96LR4 140 aa8.51□□□□□ -1.05
SLC6A6-204ENST00000613060 A0A087WYN8 130 aa8.5□□□□□ -1.05
SLC6A6-204ENST00000613060 TP53AIP1Q9HCN2 124 aa8.5□□□□□ -1.05
SLC6A6-204ENST00000613060 A0A1B0GUV1 79 aa8.5□□□□□ -1.05
SLC6A6-204ENST00000613060 LINC01561Q8N1V8 128 aa8.5□□□□□ -1.05
SLC6A6-204ENST00000613060 PLXNA2O75051 1894 aa8.49□□□□□ -1.05
SLC6A6-204ENST00000613060 IGLV6-57P01721 117 aa8.49□□□□□ -1.05
SLC6A6-204ENST00000613060 IGIPA6NJ69 53 aa8.49□□□□□ -1.05
SLC6A6-204ENST00000613060 A8MTW9 85 aa8.49□□□□□ -1.05
SLC6A6-204ENST00000613060 EPM2AB3EWF7 344 aa8.49□□□□□ -1.05
SLC6A6-204ENST00000613060 SPAG11AQ6PDA7 123 aa8.48□□□□□ -1.05
SLC6A6-204ENST00000613060 Q6ZSN1 163 aa8.48□□□□□ -1.05
SLC6A6-204ENST00000613060 A0A087WVE0 104 aa8.48□□□□□ -1.05
SLC6A6-204ENST00000613060 NBDYA0A0U1RRE5 68 aa8.48□□□□□ -1.05
SLC6A6-204ENST00000613060 SPG11Q96JI7 2443 aa8.48□□□□□ -1.05
SLC6A6-204ENST00000613060 CUL9Q8IWT3 2517 aa8.48□□□□□ -1.05
SLC6A6-204ENST00000613060 ZNF106Q9H2Y7 1883 aaKnown RBP8.47□□□□□ -1.05
SLC6A6-204ENST00000613060 LINC00694P0DN24 101 aa8.47□□□□□ -1.05
SLC6A6-204ENST00000613060 ZNF575Q86XF7 245 aa8.47□□□□□ -1.05
SLC6A6-204ENST00000613060 CSNK1G2-AS1Q8NCQ2 148 aa8.47□□□□□ -1.05
SLC6A6-204ENST00000613060 TMEM254Q8TBM7 123 aa8.47□□□□□ -1.05
SLC6A6-204ENST00000613060 COL5A1P20908 1838 aaPredicted RBP8.47□□□□□ -1.05
SLC6A6-204ENST00000613060 CENPFP49454 3210 aa8.46□□□□□ -1.05
SLC6A6-204ENST00000613060 TET2Q6N021 2002 aaPredicted RBP8.46□□□□□ -1.05
SLC6A6-204ENST00000613060 CCDC168Q8NDH2 2452 aa8.46□□□□□ -1.06
SLC6A6-204ENST00000613060 BDP1A6H8Y1 2624 aa8.46□□□□□ -1.06
SLC6A6-204ENST00000613060 C6orf48Q9UBA6 75 aa8.45□□□□□ -1.06
SLC6A6-204ENST00000613060 ATG2AQ2TAZ0 1938 aa8.45□□□□□ -1.06
SLC6A6-204ENST00000613060 CNFNQ9BYD5 112 aa8.44□□□□□ -1.06
SLC6A6-204ENST00000613060 RAI1Q7Z5J4 1906 aaPredicted RBP8.44□□□□□ -1.06
SLC6A6-204ENST00000613060 ARHGAP21Q5T5U3 1957 aa8.44□□□□□ -1.06
SLC6A6-204ENST00000613060 ANKHD1Q8IWZ3 2542 aaKnown RBP8.43□□□□□ -1.06
SLC6A6-204ENST00000613060 HIVEP3Q5T1R4 2406 aa8.43□□□□□ -1.06
SLC6A6-204ENST00000613060 TANC1Q9C0D5 1861 aa8.43□□□□□ -1.06
SLC6A6-204ENST00000613060 MYO18BQ8IUG5 2567 aa8.43□□□□□ -1.06
SLC6A6-204ENST00000613060 ZNF295-AS1Q8N0V1 137 aa8.43□□□□□ -1.06
SLC6A6-204ENST00000613060 KIF25-AS1Q9Y6Z4 181 aa8.43□□□□□ -1.06
SLC6A6-204ENST00000613060 C2orf91Q6ZV80 131 aa8.42□□□□□ -1.06
SLC6A6-204ENST00000613060 LINC00304Q8N9R0 145 aa8.42□□□□□ -1.06
SLC6A6-204ENST00000613060 Q8NBF4 154 aa8.41□□□□□ -1.06
SLC6A6-204ENST00000613060 ZNF580Q9UK33 172 aa8.41□□□□□ -1.06
SLC6A6-204ENST00000613060 NUP210Q8TEM1 1887 aaPredicted RBP8.41□□□□□ -1.06
SLC6A6-204ENST00000613060 A0A0D9SG42 100 aa8.41□□□□□ -1.06
SLC6A6-204ENST00000613060 GAS8-AS1O95177 125 aa8.4□□□□□ -1.06
SLC6A6-204ENST00000613060 Q6ZPA2 131 aa8.4□□□□□ -1.06
SLC6A6-204ENST00000613060 AMELXQ99217 191 aa8.4□□□□□ -1.06
SLC6A6-204ENST00000613060 TM2D3Q9BRN9 247 aa8.4□□□□□ -1.06
SLC6A6-204ENST00000613060 KIAA1549Q9HCM3 1950 aa8.4□□□□□ -1.07
SLC6A6-204ENST00000613060 C9orf129Q5T035 196 aaKnown RBP8.39□□□□□ -1.07
SLC6A6-204ENST00000613060 CXCL6P80162 114 aa8.39□□□□□ -1.07
SLC6A6-204ENST00000613060 DNAH12Q6ZR08 3092 aa8.39□□□□□ -1.07
SLC6A6-204ENST00000613060 TTC28Q96AY4 2481 aa8.38□□□□□ -1.07
SLC6A6-204ENST00000613060 CRIPTQ9P021 101 aa8.38□□□□□ -1.07
SLC6A6-204ENST00000613060 NAV2Q8IVL1 2488 aa8.38□□□□□ -1.07
SLC6A6-204ENST00000613060 OBSCN-AS1Q96MR7 158 aa8.37□□□□□ -1.07
SLC6A6-204ENST00000613060 IGLV5-39A0A0G2JS06 123 aa8.37□□□□□ -1.07
SLC6A6-204ENST00000613060 COL4A3Q01955 1670 aa8.37□□□□□ -1.07
SLC6A6-204ENST00000613060 SMIM29Q86T20 159 aa8.37□□□□□ -1.07
SLC6A6-204ENST00000613060 LINC00167Q96N53 147 aa8.37□□□□□ -1.07
SLC6A6-204ENST00000613060 ANAPC1Q9H1A4 1944 aa8.37□□□□□ -1.07
SLC6A6-204ENST00000613060 NAV3Q8IVL0 2385 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms