RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 APOC4P55056 127 aa10.29□□□□□ -0.76
CDH1-213ENST00000612417 A0A0U1RRA0 63 aa10.28□□□□□ -0.76
CDH1-213ENST00000612417 DEFB121Q5J5C9 76 aa10.28□□□□□ -0.76
CDH1-213ENST00000612417 CMYA5Q8N3K9 4069 aa10.27□□□□□ -0.76
CDH1-213ENST00000612417 LINC00612Q8N6U2 182 aa10.27□□□□□ -0.76
CDH1-213ENST00000612417 KIR2DL5BQ8NHK3 375 aa10.27□□□□□ -0.76
CDH1-213ENST00000612417 COX7B2Q8TF08 81 aa10.27□□□□□ -0.77
CDH1-213ENST00000612417 TRAV8-4A0A0B4J246 113 aa10.26□□□□□ -0.77
CDH1-213ENST00000612417 IGHV3OR16-9A0A0B4J2B5 98 aa10.26□□□□□ -0.77
CDH1-213ENST00000612417 RPS28P62857 69 aaKnown RBP10.26□□□□□ -0.77
CDH1-213ENST00000612417 DEFB135Q30KP9 77 aa10.26□□□□□ -0.77
CDH1-213ENST00000612417 IGLV4-60A0A075B6I1 120 aa10.26□□□□□ -0.77
CDH1-213ENST00000612417 FAM240AA0A1B0GVK7 77 aa10.25□□□□□ -0.77
CDH1-213ENST00000612417 IGHV4-30-4P0DP06 118 aa10.25□□□□□ -0.77
CDH1-213ENST00000612417 MRPL23Q16540 153 aaKnown RBP10.25□□□□□ -0.77
CDH1-213ENST00000612417 FAM222AQ5U5X8 452 aa10.25□□□□□ -0.77
CDH1-213ENST00000612417 KRTAP10-11P60412 298 aa10.24□□□□□ -0.77
CDH1-213ENST00000612417 A0A087WZ39 114 aa10.24□□□□□ -0.77
CDH1-213ENST00000612417 CHCHD5Q9BSY4 110 aa10.24□□□□□ -0.77
CDH1-213ENST00000612417 X6R8D5 127 aa10.24□□□□□ -0.77
CDH1-213ENST00000612417 TRACP01848 142 aa10.23□□□□□ -0.77
CDH1-213ENST00000612417 TRAV13-2A0A0B4J235 113 aa10.22□□□□□ -0.77
CDH1-213ENST00000612417 FAM19A5Q7Z5A7 132 aaPredicted RBP10.22□□□□□ -0.77
CDH1-213ENST00000612417 DEFB130BP0DP73 79 aa10.22□□□□□ -0.77
CDH1-213ENST00000612417 DEFB130AP0DP74 79 aa10.22□□□□□ -0.77
CDH1-213ENST00000612417 MIR7-3HGQ8N6C7 128 aa10.21□□□□□ -0.77
CDH1-213ENST00000612417 IBA57-AS1B1ANH7 110 aa10.2□□□□□ -0.78
CDH1-213ENST00000612417 RPL28P46779 137 aaKnown RBP10.2□□□□□ -0.78
CDH1-213ENST00000612417 IGKV3OR2-268A0A0C4DH90 116 aa10.19□□□□□ -0.78
CDH1-213ENST00000612417 LINC00959A0A1B0GUT2 108 aa10.19□□□□□ -0.78
CDH1-213ENST00000612417 A0A1B0GUV1 79 aa10.19□□□□□ -0.78
CDH1-213ENST00000612417 DEFB4AO15263 64 aa10.19□□□□□ -0.78
CDH1-213ENST00000612417 CRPP02741 224 aa10.19□□□□□ -0.78
CDH1-213ENST00000612417 EGFEM1PQ0D2K5 195 aa10.19□□□□□ -0.78
CDH1-213ENST00000612417 TOMM7Q9P0U1 55 aa10.19□□□□□ -0.78
CDH1-213ENST00000612417 SND1-IT1Q9HBX3 110 aa10.19□□□□□ -0.78
CDH1-213ENST00000612417 IGKV2-28A0A075B6P5 120 aa10.18□□□□□ -0.78
CDH1-213ENST00000612417 IGKV2D-28P01615 120 aa10.18□□□□□ -0.78
CDH1-213ENST00000612417 GYPEP15421 78 aa10.18□□□□□ -0.78
CDH1-213ENST00000612417 LINC00337Q8N6G1 96 aa10.18□□□□□ -0.78
CDH1-213ENST00000612417 IGHV4-28A0A0C4DH34 117 aa10.17□□□□□ -0.78
CDH1-213ENST00000612417 C15orf53Q8NAA6 179 aa10.17□□□□□ -0.78
CDH1-213ENST00000612417 LINC00158P58513 81 aa10.16□□□□□ -0.78
CDH1-213ENST00000612417 FAM218AQ96MZ4 157 aa10.16□□□□□ -0.78
CDH1-213ENST00000612417 PRO0255Q9UI72 69 aa10.16□□□□□ -0.78
CDH1-213ENST00000612417 CCL18P55774 89 aa10.16□□□□□ -0.78
CDH1-213ENST00000612417 C5orf38Q86SI9 138 aa10.16□□□□□ -0.78
CDH1-213ENST00000612417 LINC01561Q8N1V8 128 aa10.16□□□□□ -0.78
CDH1-213ENST00000612417 MIFP14174 115 aa10.15□□□□□ -0.78
CDH1-213ENST00000612417 ANK2Q01484 3957 aa10.15□□□□□ -0.78
CDH1-213ENST00000612417 LYRM9A8MSI8 78 aa10.14□□□□□ -0.79
CDH1-213ENST00000612417 ACYP1P07311 99 aa10.14□□□□□ -0.79
CDH1-213ENST00000612417 NOTCH1P46531 2555 aa10.14□□□□□ -0.79
CDH1-213ENST00000612417 SS18Q15532 418 aa10.14□□□□□ -0.79
CDH1-213ENST00000612417 LOC107984640A0A0U1RRK4 108 aa10.13□□□□□ -0.79
CDH1-213ENST00000612417 BAALC-AS2P0C853 105 aa10.13□□□□□ -0.79
CDH1-213ENST00000612417 Q8IZM0 81 aa10.13□□□□□ -0.79
CDH1-213ENST00000612417 Q8NAQ8 132 aa10.13□□□□□ -0.79
CDH1-213ENST00000612417 C22orf24Q9Y442 160 aa10.13□□□□□ -0.79
CDH1-213ENST00000612417 C3orf22Q8N5N4 141 aa10.13□□□□□ -0.79
CDH1-213ENST00000612417 C9orf153Q5TBE3 101 aa10.12□□□□□ -0.79
CDH1-213ENST00000612417 SMIM11BQ8TCY0 68 aa10.12□□□□□ -0.79
CDH1-213ENST00000612417 DNAH3Q8TD57 4116 aa10.12□□□□□ -0.79
CDH1-213ENST00000612417 UQCRQO14949 82 aa10.11□□□□□ -0.79
CDH1-213ENST00000612417 DAD1P61803 113 aa10.11□□□□□ -0.79
CDH1-213ENST00000612417 C6orf226Q5I0X4 101 aa10.11□□□□□ -0.79
CDH1-213ENST00000612417 MDFIQ99750 246 aa10.11□□□□□ -0.79
CDH1-213ENST00000612417 XCL1P47992 114 aa10.11□□□□□ -0.79
CDH1-213ENST00000612417 RETNQ9HD89 108 aa10.11□□□□□ -0.79
CDH1-213ENST00000612417 TRBV7-7A0A0K0K1E9 115 aa10.1□□□□□ -0.79
CDH1-213ENST00000612417 H0YGX0 51 aa10.1□□□□□ -0.79
CDH1-213ENST00000612417 PAX4O43316 350 aa10.1□□□□□ -0.79
CDH1-213ENST00000612417 ATP5G1P05496 136 aa10.1□□□□□ -0.79
CDH1-213ENST00000612417 PFN2P35080 140 aa10.1□□□□□ -0.79
CDH1-213ENST00000612417 CELA1Q9UNI1 258 aa10.1□□□□□ -0.79
CDH1-213ENST00000612417 SPART-AS1P0CW21 52 aa10.1□□□□□ -0.79
CDH1-213ENST00000612417 LINC00526Q96FQ7 95 aa10.1□□□□□ -0.79
CDH1-213ENST00000612417 IMUPQ9GZP8 106 aa10.1□□□□□ -0.79
CDH1-213ENST00000612417 PRB2P02812 416 aaPredicted RBP10.09□□□□□ -0.79
CDH1-213ENST00000612417 INAFM2P0DMQ5 153 aa10.08□□□□□ -0.8
CDH1-213ENST00000612417 MALP21145 153 aa10.08□□□□□ -0.8
CDH1-213ENST00000612417 SDIM1Q6ZPB5 146 aa10.08□□□□□ -0.8
CDH1-213ENST00000612417 NBEAL1Q6ZS30 2694 aa10.08□□□□□ -0.8
CDH1-213ENST00000612417 HTN3P15516 51 aa10.06□□□□□ -0.8
CDH1-213ENST00000612417 CD164L2Q6UWJ8 174 aa10.06□□□□□ -0.8
CDH1-213ENST00000612417 Q9HAA7 133 aa10.06□□□□□ -0.8
CDH1-213ENST00000612417 A0A087WYN8 130 aa10.06□□□□□ -0.8
CDH1-213ENST00000612417 A0A096LPF7 62 aa10.06□□□□□ -0.8
CDH1-213ENST00000612417 DNAL4O96015 105 aa10.06□□□□□ -0.8
CDH1-213ENST00000612417 CXCL5P42830 114 aa10.06□□□□□ -0.8
CDH1-213ENST00000612417 CLPSL2Q6UWE3 100 aa10.06□□□□□ -0.8
CDH1-213ENST00000612417 C11orf68Q9H3H3 251 aaKnown RBP10.06□□□□□ -0.8
CDH1-213ENST00000612417 COX17Q14061 63 aa10.05□□□□□ -0.8
CDH1-213ENST00000612417 MGAM2Q2M2H8 2515 aa10.05□□□□□ -0.8
CDH1-213ENST00000612417 KIAA0087Q14695 138 aa10.05□□□□□ -0.8
CDH1-213ENST00000612417 LINC00269Q8N2A0 174 aa10.05□□□□□ -0.8
CDH1-213ENST00000612417 LINC00643Q86TS7 51 aa10.03□□□□□ -0.8
CDH1-213ENST00000612417 NDUFC2O95298 119 aa10.03□□□□□ -0.8
CDH1-213ENST00000612417 SMCR5Q8TEV8 140 aa10.03□□□□□ -0.8
CDH1-213ENST00000612417 CHCHD10Q8WYQ3 142 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms