RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 PAX4O43316 350 aa11.96□□□□□ -0.49
NEK3-206ENST00000611833 CLPSL2Q6UWE3 100 aa11.96□□□□□ -0.49
NEK3-206ENST00000611833 C9orf66Q5T8R8 295 aa11.95□□□□□ -0.5
NEK3-206ENST00000611833 ANAPC13Q9BS18 74 aa11.95□□□□□ -0.5
NEK3-206ENST00000611833 HECTD1Q9ULT8 2610 aa11.95□□□□□ -0.5
NEK3-206ENST00000611833 NBEAL2Q6ZNJ1 2754 aa11.95□□□□□ -0.5
NEK3-206ENST00000611833 TTC32Q5I0X7 151 aa11.94□□□□□ -0.5
NEK3-206ENST00000611833 LYRM9A8MSI8 78 aa11.94□□□□□ -0.5
NEK3-206ENST00000611833 DEFB4AO15263 64 aa11.93□□□□□ -0.5
NEK3-206ENST00000611833 DEFB135Q30KP9 77 aa11.93□□□□□ -0.5
NEK3-206ENST00000611833 MRPL23Q16540 153 aaKnown RBP11.93□□□□□ -0.5
NEK3-206ENST00000611833 SMIM11BQ8TCY0 68 aa11.93□□□□□ -0.5
NEK3-206ENST00000611833 Q9HAA7 133 aa11.92□□□□□ -0.5
NEK3-206ENST00000611833 Q6Q795 121 aa11.91□□□□□ -0.5
NEK3-206ENST00000611833 Q8IZM0 81 aa11.91□□□□□ -0.5
NEK3-206ENST00000611833 OR13C6PQ8NH95 151 aa11.91□□□□□ -0.5
NEK3-206ENST00000611833 ACYP1P07311 99 aa11.9□□□□□ -0.5
NEK3-206ENST00000611833 TRAV26-1A0A087WT03 109 aa11.89□□□□□ -0.51
NEK3-206ENST00000611833 DNAL4O96015 105 aa11.89□□□□□ -0.51
NEK3-206ENST00000611833 APOC4P55056 127 aa11.89□□□□□ -0.51
NEK3-206ENST00000611833 LINC00269Q8N2A0 174 aa11.89□□□□□ -0.51
NEK3-206ENST00000611833 NOTCH2Q04721 2471 aa11.89□□□□□ -0.51
NEK3-206ENST00000611833 TENM1Q9UKZ4 2725 aa11.89□□□□□ -0.51
NEK3-206ENST00000611833 NDUFV3P56181 108 aaKnown RBP11.89□□□□□ -0.51
NEK3-206ENST00000611833 NSD1Q96L73 2696 aaPredicted RBP11.89□□□□□ -0.51
NEK3-206ENST00000611833 MALP21145 153 aa11.88□□□□□ -0.51
NEK3-206ENST00000611833 DAD1P61803 113 aa11.88□□□□□ -0.51
NEK3-206ENST00000611833 IGHV4-28A0A0C4DH34 117 aa11.88□□□□□ -0.51
NEK3-206ENST00000611833 H0YGX0 51 aa11.88□□□□□ -0.51
NEK3-206ENST00000611833 A0A087WYN8 130 aa11.87□□□□□ -0.51
NEK3-206ENST00000611833 LINC01561Q8N1V8 128 aa11.87□□□□□ -0.51
NEK3-206ENST00000611833 ANGP03950 147 aaKnown RBP11.87□□□□□ -0.51
NEK3-206ENST00000611833 C22orf24Q9Y442 160 aa11.87□□□□□ -0.51
NEK3-206ENST00000611833 CD164L2Q6UWJ8 174 aa11.86□□□□□ -0.51
NEK3-206ENST00000611833 IGLV10-54A0A075B6I4 117 aa11.85□□□□□ -0.51
NEK3-206ENST00000611833 CFAP161Q6P656 301 aa11.85□□□□□ -0.51
NEK3-206ENST00000611833 CHCHD10Q8WYQ3 142 aaPredicted RBP11.85□□□□□ -0.51
NEK3-206ENST00000611833 ATP5G1P05496 136 aa11.85□□□□□ -0.51
NEK3-206ENST00000611833 INAFM2P0DMQ5 153 aa11.85□□□□□ -0.51
NEK3-206ENST00000611833 REG3AQ06141 175 aa11.84□□□□□ -0.51
NEK3-206ENST00000611833 Q8N3U1 123 aa11.84□□□□□ -0.51
NEK3-206ENST00000611833 NHLRC4P0CG21 123 aaPredicted RBP11.83□□□□□ -0.51
NEK3-206ENST00000611833 CELA1Q9UNI1 258 aa11.82□□□□□ -0.52
NEK3-206ENST00000611833 LECT2O14960 151 aa11.82□□□□□ -0.52
NEK3-206ENST00000611833 HTN3P15516 51 aa11.81□□□□□ -0.52
NEK3-206ENST00000611833 Q8NAQ8 132 aa11.81□□□□□ -0.52
NEK3-206ENST00000611833 MIFP14174 115 aa11.81□□□□□ -0.52
NEK3-206ENST00000611833 CXCL5P42830 114 aa11.81□□□□□ -0.52
NEK3-206ENST00000611833 KIAA0087Q14695 138 aa11.81□□□□□ -0.52
NEK3-206ENST00000611833 GAGE2AQ6NT46 116 aa11.81□□□□□ -0.52
NEK3-206ENST00000611833 TRBV7-7A0A0K0K1E9 115 aa11.8□□□□□ -0.52
NEK3-206ENST00000611833 SPART-AS1P0CW21 52 aa11.79□□□□□ -0.52
NEK3-206ENST00000611833 COX17Q14061 63 aa11.79□□□□□ -0.52
NEK3-206ENST00000611833 SMCR5Q8TEV8 140 aa11.79□□□□□ -0.52
NEK3-206ENST00000611833 TRRAPQ9Y4A5 3859 aa11.79□□□□□ -0.52
NEK3-206ENST00000611833 PRR3P79522 188 aaKnown RBP11.78□□□□□ -0.52
NEK3-206ENST00000611833 HIVEP1P15822 2718 aa11.78□□□□□ -0.52
NEK3-206ENST00000611833 LINC00643Q86TS7 51 aa11.78□□□□□ -0.52
NEK3-206ENST00000611833 ATRQ13535 2644 aa11.77□□□□□ -0.53
NEK3-206ENST00000611833 SLPIP03973 132 aa11.76□□□□□ -0.53
NEK3-206ENST00000611833 C9orf116Q5BN46 136 aaPredicted RBP11.76□□□□□ -0.53
NEK3-206ENST00000611833 TEP1Q99973 2627 aaKnown RBP11.75□□□□□ -0.53
NEK3-206ENST00000611833 NDUFC2O95298 119 aa11.75□□□□□ -0.53
NEK3-206ENST00000611833 IGHV4-30-4P0DP06 118 aa11.75□□□□□ -0.53
NEK3-206ENST00000611833 C9orf129Q5T035 196 aaKnown RBP11.75□□□□□ -0.53
NEK3-206ENST00000611833 WFDC9Q8NEX5 89 aa11.75□□□□□ -0.53
NEK3-206ENST00000611833 C14orf132Q9NPU4 83 aa11.75□□□□□ -0.53
NEK3-206ENST00000611833 LELP1Q5T871 98 aa11.75□□□□□ -0.53
NEK3-206ENST00000611833 IMUPQ9GZP8 106 aa11.75□□□□□ -0.53
NEK3-206ENST00000611833 TMEM126AQ9H061 195 aa11.74□□□□□ -0.53
NEK3-206ENST00000611833 ORMDL1Q9P0S3 153 aa11.74□□□□□ -0.53
NEK3-206ENST00000611833 SDIM1Q6ZPB5 146 aa11.73□□□□□ -0.53
NEK3-206ENST00000611833 CCDC179H3BU77 68 aa11.72□□□□□ -0.53
NEK3-206ENST00000611833 NANOS2P60321 138 aaKnown RBP11.72□□□□□ -0.53
NEK3-206ENST00000611833 B5MCH6 92 aa11.72□□□□□ -0.53
NEK3-206ENST00000611833 NCR3O14931 201 aa11.71□□□□□ -0.53
NEK3-206ENST00000611833 WIPF1O43516 503 aa11.71□□□□□ -0.53
NEK3-206ENST00000611833 SPAG11BQ08648 103 aa11.71□□□□□ -0.53
NEK3-206ENST00000611833 KLK12Q9UKR0 248 aa11.71□□□□□ -0.53
NEK3-206ENST00000611833 KLK5Q9Y337 293 aaPredicted RBP11.71□□□□□ -0.53
NEK3-206ENST00000611833 C6orf223Q8N319 242 aa11.71□□□□□ -0.54
NEK3-206ENST00000611833 OBSCN-AS1Q96MR7 158 aa11.71□□□□□ -0.54
NEK3-206ENST00000611833 FAM236AA0A1B0GUQ0 79 aa11.7□□□□□ -0.54
NEK3-206ENST00000611833 FAM236BA0A1B0GV22 79 aa11.7□□□□□ -0.54
NEK3-206ENST00000611833 UNQ6190/PRO20217Q6UXQ8 127 aa11.7□□□□□ -0.54
NEK3-206ENST00000611833 A0A1B0GX51 115 aa11.69□□□□□ -0.54
NEK3-206ENST00000611833 S100A7L2Q5SY68 101 aa11.69□□□□□ -0.54
NEK3-206ENST00000611833 C10orf25Q5T742 122 aa11.69□□□□□ -0.54
NEK3-206ENST00000611833 Q8N814 137 aa11.69□□□□□ -0.54
NEK3-206ENST00000611833 LINC00526Q96FQ7 95 aa11.69□□□□□ -0.54
NEK3-206ENST00000611833 CYSRT1A8MQ03 144 aa11.67□□□□□ -0.54
NEK3-206ENST00000611833 PRR34Q9NV39 138 aa11.67□□□□□ -0.54
NEK3-206ENST00000611833 Q8NDZ9 215 aa11.66□□□□□ -0.54
NEK3-206ENST00000611833 LINC00167Q96N53 147 aa11.66□□□□□ -0.54
NEK3-206ENST00000611833 ENHOQ6UWT2 76 aa11.66□□□□□ -0.54
NEK3-206ENST00000611833 C6orf99Q4VX62 202 aa11.65□□□□□ -0.54
NEK3-206ENST00000611833 LYPD5Q6UWN5 251 aa11.65□□□□□ -0.54
NEK3-206ENST00000611833 SS18L2Q9UHA2 77 aa11.65□□□□□ -0.54
NEK3-206ENST00000611833 MUC7Q8TAX7 377 aa11.64□□□□□ -0.55
NEK3-206ENST00000611833 A0A0J9YWU9 116 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms