RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 LOC100130705A0A1B0GUX0 176 aa-1.22□□□□□ -2.6
HDDC2-207ENST00000608532 CPSF4LA6NMK7 179 aaKnown RBP-1.22□□□□□ -2.6
HDDC2-207ENST00000608532 MIF4GDA9UHW6 222 aaKnown RBP-1.22□□□□□ -2.6
HDDC2-207ENST00000608532 CHKB-CPT1BH3BT56 60 aa-1.22□□□□□ -2.6
HDDC2-207ENST00000608532 ARPC4P59998 168 aa-1.22□□□□□ -2.6
HDDC2-207ENST00000608532 NXT2Q9NPJ8 142 aaKnown RBP-1.22□□□□□ -2.6
HDDC2-207ENST00000608532 LAMA1P25391 3075 aa-1.22□□□□□ -2.61
HDDC2-207ENST00000608532 ANK3Q12955 4377 aaKnown RBP-1.22□□□□□ -2.61
HDDC2-207ENST00000608532 KIAA1551Q9HCM1 1747 aa-1.23□□□□□ -2.61
HDDC2-207ENST00000608532 PLEKHH2Q8IVE3 1493 aa-1.23□□□□□ -2.61
HDDC2-207ENST00000608532 COX8AP10176 69 aa-1.23□□□□□ -2.61
HDDC2-207ENST00000608532 COMMD6Q7Z4G1 85 aa-1.23□□□□□ -2.61
HDDC2-207ENST00000608532 DIP2CQ9Y2E4 1556 aa-1.23□□□□□ -2.61
HDDC2-207ENST00000608532 LAMA2P24043 3122 aaKnown RBP-1.23□□□□□ -2.61
HDDC2-207ENST00000608532 DNAH2Q9P225 4427 aa-1.23□□□□□ -2.61
HDDC2-207ENST00000608532 DNAH11Q96DT5 4516 aa-1.23□□□□□ -2.61
HDDC2-207ENST00000608532 COL14A1Q05707 1796 aaKnown RBP-1.24□□□□□ -2.61
HDDC2-207ENST00000608532 SLIT1O75093 1534 aa-1.24□□□□□ -2.61
HDDC2-207ENST00000608532 PIGBOS1A0A0B4J2F0 54 aa-1.24□□□□□ -2.61
HDDC2-207ENST00000608532 LOC285095A0A1B0GVY8 99 aa-1.24□□□□□ -2.61
HDDC2-207ENST00000608532 MEIG1Q5JSS6 88 aa-1.24□□□□□ -2.61
HDDC2-207ENST00000608532 LELP1Q5T871 98 aa-1.24□□□□□ -2.61
HDDC2-207ENST00000608532 C5orf38Q86SI9 138 aa-1.24□□□□□ -2.61
HDDC2-207ENST00000608532 FAM167A-AS1Q96KT0 104 aa-1.24□□□□□ -2.61
HDDC2-207ENST00000608532 ARL2-SNX15V9GYD0 113 aa-1.24□□□□□ -2.61
HDDC2-207ENST00000608532 TRANK1O15050 2925 aa-1.25□□□□□ -2.61
HDDC2-207ENST00000608532 DMXL1Q9Y485 3027 aa-1.25□□□□□ -2.61
HDDC2-207ENST00000608532 GNG7O60262 68 aa-1.25□□□□□ -2.61
HDDC2-207ENST00000608532 IFNGP01579 166 aa-1.25□□□□□ -2.61
HDDC2-207ENST00000608532 UBA52P62987 128 aaKnown RBP-1.25□□□□□ -2.61
HDDC2-207ENST00000608532 CATR1Q13166 79 aa-1.25□□□□□ -2.61
HDDC2-207ENST00000608532 C9orf62Q8N4C0 152 aa-1.25□□□□□ -2.61
HDDC2-207ENST00000608532 FDCSPQ8NFU4 85 aa-1.25□□□□□ -2.61
HDDC2-207ENST00000608532 USMG5Q96IX5 58 aa-1.25□□□□□ -2.61
HDDC2-207ENST00000608532 LINC00470Q9BZP3 86 aa-1.25□□□□□ -2.61
HDDC2-207ENST00000608532 MRC2Q9UBG0 1479 aa-1.25□□□□□ -2.61
HDDC2-207ENST00000608532 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.26□□□□□ -2.61
HDDC2-207ENST00000608532 CHD1O14646 1710 aa-1.26□□□□□ -2.61
HDDC2-207ENST00000608532 UNC13AQ9UPW8 1703 aa-1.26□□□□□ -2.61
HDDC2-207ENST00000608532 OOSP1A8MZH6 123 aa-1.26□□□□□ -2.61
HDDC2-207ENST00000608532 MT1AP04731 61 aa-1.26□□□□□ -2.61
HDDC2-207ENST00000608532 Q56UQ5 140 aa-1.26□□□□□ -2.61
HDDC2-207ENST00000608532 COPS9Q8WXC6 57 aa-1.26□□□□□ -2.61
HDDC2-207ENST00000608532 PPP3R2Q96LZ3 170 aa-1.26□□□□□ -2.61
HDDC2-207ENST00000608532 FAM223BA6NKX1 122 aa-1.27□□□□□ -2.61
HDDC2-207ENST00000608532 SSSCA1O60232 199 aa-1.27□□□□□ -2.61
HDDC2-207ENST00000608532 BTG2P78543 158 aa-1.27□□□□□ -2.61
HDDC2-207ENST00000608532 FAIMQ9NVQ4 179 aa-1.27□□□□□ -2.61
HDDC2-207ENST00000608532 TARBP1Q13395 1621 aaKnown RBP-1.27□□□□□ -2.61
HDDC2-207ENST00000608532 KIAA1109Q2LD37 5005 aa-1.28□□□□□ -2.61
HDDC2-207ENST00000608532 A2ML1A8K2U0 1454 aa-1.28□□□□□ -2.61
HDDC2-207ENST00000608532 SFTA2Q6UW10 78 aa-1.28□□□□□ -2.61
HDDC2-207ENST00000608532 PFDN5Q99471 154 aa-1.28□□□□□ -2.61
HDDC2-207ENST00000608532 CC2D2AQ9P2K1 1620 aa-1.29□□□□□ -2.62
HDDC2-207ENST00000608532 NCOA3Q9Y6Q9 1424 aa-1.29□□□□□ -2.62
HDDC2-207ENST00000608532 UBE2D3P61077 147 aa-1.29□□□□□ -2.62
HDDC2-207ENST00000608532 UBE2D2P62837 147 aa-1.29□□□□□ -2.62
HDDC2-207ENST00000608532 PLECQ15149 4684 aaKnown RBP-1.29□□□□□ -2.62
HDDC2-207ENST00000608532 C8orf59Q8N0T1 100 aaPredicted RBP-1.29□□□□□ -2.62
HDDC2-207ENST00000608532 ZNF436-AS1Q8NC38 126 aaPredicted RBP-1.29□□□□□ -2.62
HDDC2-207ENST00000608532 ARL11Q969Q4 196 aa-1.29□□□□□ -2.62
HDDC2-207ENST00000608532 RGPD2P0DJD1 1756 aa-1.29□□□□□ -2.62
HDDC2-207ENST00000608532 KNDC1Q76NI1 1749 aa-1.29□□□□□ -2.62
HDDC2-207ENST00000608532 TROQ12816 1431 aaPredicted RBP-1.3□□□□□ -2.62
HDDC2-207ENST00000608532 NDUFA2O43678 99 aa-1.3□□□□□ -2.62
HDDC2-207ENST00000608532 SEC11AP67812 179 aa-1.3□□□□□ -2.62
HDDC2-207ENST00000608532 Q0VG73 95 aa-1.3□□□□□ -2.62
HDDC2-207ENST00000608532 WHAMMP3Q1A5X7 153 aa-1.3□□□□□ -2.62
HDDC2-207ENST00000608532 PRO1933Q9H354 126 aa-1.3□□□□□ -2.62
HDDC2-207ENST00000608532 UQCR10Q9UDW1 63 aa-1.3□□□□□ -2.62
HDDC2-207ENST00000608532 SHPRHQ149N8 1683 aa-1.3□□□□□ -2.62
HDDC2-207ENST00000608532 KALRNO60229 2985 aa-1.3□□□□□ -2.62
HDDC2-207ENST00000608532 LRRC37AA6NMS7 1700 aa-1.31□□□□□ -2.62
HDDC2-207ENST00000608532 FAM25AB3EWG3 89 aa-1.31□□□□□ -2.62
HDDC2-207ENST00000608532 FAM25CB3EWG5 89 aa-1.31□□□□□ -2.62
HDDC2-207ENST00000608532 FAM25GB3EWG6 89 aa-1.31□□□□□ -2.62
HDDC2-207ENST00000608532 H0YGG7 62 aa-1.31□□□□□ -2.62
HDDC2-207ENST00000608532 APOC2P02655 101 aa-1.31□□□□□ -2.62
HDDC2-207ENST00000608532 SELENOWP63302 87 aa-1.31□□□□□ -2.62
HDDC2-207ENST00000608532 EDC4Q6P2E9 1401 aaKnown RBP-1.32□□□□□ -2.62
HDDC2-207ENST00000608532 SCAPERQ9BY12 1400 aa-1.32□□□□□ -2.62
HDDC2-207ENST00000608532 RYR2Q92736 4967 aa-1.32□□□□□ -2.62
HDDC2-207ENST00000608532 DNAH1Q9P2D7 4330 aa-1.32□□□□□ -2.62
HDDC2-207ENST00000608532 A0A087WVE0 104 aa-1.32□□□□□ -2.62
HDDC2-207ENST00000608532 DPH3P1Q9H4G8 78 aa-1.32□□□□□ -2.62
HDDC2-207ENST00000608532 RNF213Q63HN8 5207 aa-1.32□□□□□ -2.62
HDDC2-207ENST00000608532 ANKRD11Q6UB99 2663 aaPredicted RBP-1.32□□□□□ -2.62
HDDC2-207ENST00000608532 BCORQ6W2J9 1755 aa-1.32□□□□□ -2.62
HDDC2-207ENST00000608532 MON2Q7Z3U7 1717 aa-1.32□□□□□ -2.62
HDDC2-207ENST00000608532 NALCNQ8IZF0 1738 aa-1.32□□□□□ -2.62
HDDC2-207ENST00000608532 TOPAZ1Q8N9V7 1692 aa-1.32□□□□□ -2.62
HDDC2-207ENST00000608532 CICQ96RK0 1608 aaPredicted RBP-1.33□□□□□ -2.62
HDDC2-207ENST00000608532 PDE4DIPQ5VU43 2346 aa-1.33□□□□□ -2.62
HDDC2-207ENST00000608532 CUX1P39880 1505 aa-1.33□□□□□ -2.62
HDDC2-207ENST00000608532 A0A1B0GU69 56 aa-1.33□□□□□ -2.62
HDDC2-207ENST00000608532 FGF7P21781 194 aa-1.33□□□□□ -2.62
HDDC2-207ENST00000608532 MANBALQ9NQG1 85 aa-1.33□□□□□ -2.62
HDDC2-207ENST00000608532 LINC00846Q9NV44 126 aa-1.33□□□□□ -2.62
HDDC2-207ENST00000608532 SPHKAPQ2M3C7 1700 aa-1.33□□□□□ -2.62
HDDC2-207ENST00000608532 DNHD1Q96M86 4753 aa-1.33□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms