RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 KRTAP29-1A8MX34 341 aaPredicted RBP12.06□□□□□ -0.48
SRSF4-206ENST00000605204 CXCL5P42830 114 aa12.06□□□□□ -0.48
SRSF4-206ENST00000605204 C6orf226Q5I0X4 101 aa12.06□□□□□ -0.48
SRSF4-206ENST00000605204 ATP5LO75964 103 aa12.05□□□□□ -0.48
SRSF4-206ENST00000605204 C10orf25Q5T742 122 aa12.05□□□□□ -0.48
SRSF4-206ENST00000605204 A0A096LNJ9 63 aa12.05□□□□□ -0.48
SRSF4-206ENST00000605204 CBLN2Q8IUK8 224 aa12.05□□□□□ -0.48
SRSF4-206ENST00000605204 CHCHD1Q96BP2 118 aaKnown RBP12.05□□□□□ -0.48
SRSF4-206ENST00000605204 URB1-AS1Q96HZ7 61 aa12.05□□□□□ -0.48
SRSF4-206ENST00000605204 TOMM7Q9P0U1 55 aa12.05□□□□□ -0.48
SRSF4-206ENST00000605204 NDUFC2-KCTD14E9PQ53 114 aa12.04□□□□□ -0.48
SRSF4-206ENST00000605204 H3BRM9 83 aa12.04□□□□□ -0.48
SRSF4-206ENST00000605204 OXTP01178 125 aa12.04□□□□□ -0.48
SRSF4-206ENST00000605204 PDZD11Q5EBL8 140 aa12.04□□□□□ -0.48
SRSF4-206ENST00000605204 C9orf116Q5BN46 136 aaPredicted RBP12.03□□□□□ -0.48
SRSF4-206ENST00000605204 C2orf82Q6UX34 121 aa12.03□□□□□ -0.48
SRSF4-206ENST00000605204 Q6ZRP5 223 aa12.03□□□□□ -0.48
SRSF4-206ENST00000605204 SMIM1B2RUZ4 78 aa12.02□□□□□ -0.49
SRSF4-206ENST00000605204 F8VRH5 84 aa12.02□□□□□ -0.49
SRSF4-206ENST00000605204 PRR3P79522 188 aaKnown RBP12.02□□□□□ -0.49
SRSF4-206ENST00000605204 SLC7A5P1Q8MH63 180 aa12.02□□□□□ -0.49
SRSF4-206ENST00000605204 IGLC3P0DOY3 106 aa12□□□□□ -0.49
SRSF4-206ENST00000605204 A0A1W2PNN7 141 aa11.99□□□□□ -0.49
SRSF4-206ENST00000605204 HNRNPA3P51991 378 aaKnown RBP11.98□□□□□ -0.49
SRSF4-206ENST00000605204 NDUFA6P56556 154 aa11.98□□□□□ -0.49
SRSF4-206ENST00000605204 PMCHL1Q16048 86 aa11.97□□□□□ -0.49
SRSF4-206ENST00000605204 GAGE2EQ4V326 116 aa11.97□□□□□ -0.49
SRSF4-206ENST00000605204 COX7B2Q8TF08 81 aa11.97□□□□□ -0.49
SRSF4-206ENST00000605204 GAGE2DQ9UEU5 116 aa11.97□□□□□ -0.49
SRSF4-206ENST00000605204 HSBP1O75506 76 aa11.95□□□□□ -0.5
SRSF4-206ENST00000605204 BAGE3Q86Y29 109 aa11.95□□□□□ -0.5
SRSF4-206ENST00000605204 TRGC2P03986 189 aa11.94□□□□□ -0.5
SRSF4-206ENST00000605204 ODF1Q14990 250 aa11.94□□□□□ -0.5
SRSF4-206ENST00000605204 SPINK8P0C7L1 97 aa11.93□□□□□ -0.5
SRSF4-206ENST00000605204 SFTA2Q6UW10 78 aa11.93□□□□□ -0.5
SRSF4-206ENST00000605204 IGLV5-39A0A0G2JS06 123 aa11.92□□□□□ -0.5
SRSF4-206ENST00000605204 ZNF22P17026 224 aaPredicted RBP11.92□□□□□ -0.5
SRSF4-206ENST00000605204 IFI27L1Q96BM0 104 aa11.92□□□□□ -0.5
SRSF4-206ENST00000605204 TRAV12-1A0A0B4J245 112 aa11.92□□□□□ -0.5
SRSF4-206ENST00000605204 SPINK6Q6UWN8 80 aa11.92□□□□□ -0.5
SRSF4-206ENST00000605204 FAM19A5Q7Z5A7 132 aaPredicted RBP11.92□□□□□ -0.5
SRSF4-206ENST00000605204 FAM168BA1KXE4 195 aa11.9□□□□□ -0.5
SRSF4-206ENST00000605204 COLCA2A8K830 154 aa11.9□□□□□ -0.5
SRSF4-206ENST00000605204 M0QXV9 152 aa11.9□□□□□ -0.5
SRSF4-206ENST00000605204 C9orf129Q5T035 196 aaKnown RBP11.9□□□□□ -0.5
SRSF4-206ENST00000605204 PHF5AQ7RTV0 110 aaKnown RBP11.9□□□□□ -0.5
SRSF4-206ENST00000605204 CHTOPQ9Y3Y2 248 aaKnown RBP11.9□□□□□ -0.5
SRSF4-206ENST00000605204 PSORS1C2Q9UIG4 136 aa11.89□□□□□ -0.51
SRSF4-206ENST00000605204 C11orf86A6NJI1 115 aa11.88□□□□□ -0.51
SRSF4-206ENST00000605204 TMEM170BQ5T4T1 132 aa11.88□□□□□ -0.51
SRSF4-206ENST00000605204 REG3GQ6UW15 175 aa11.86□□□□□ -0.51
SRSF4-206ENST00000605204 UBE2BP63146 152 aa11.85□□□□□ -0.51
SRSF4-206ENST00000605204 SRSF9Q13242 221 aaKnown RBP eCLIP11.85□□□□□ -0.512e-6■■■□□ 17.4
SRSF4-206ENST00000605204 LBHQ53QV2 105 aaPredicted RBP11.85□□□□□ -0.51
SRSF4-206ENST00000605204 SERTAD4-AS1Q5TG53 156 aa11.85□□□□□ -0.51
SRSF4-206ENST00000605204 XAGE1AQ9HD64 81 aa11.85□□□□□ -0.51
SRSF4-206ENST00000605204 TP73-AS1Q9UF72 201 aa11.85□□□□□ -0.51
SRSF4-206ENST00000605204 SERF1AO75920 110 aa11.84□□□□□ -0.51
SRSF4-206ENST00000605204 LEPROTL1O95214 131 aa11.84□□□□□ -0.51
SRSF4-206ENST00000605204 C1orf137Q5JT78 98 aa11.84□□□□□ -0.51
SRSF4-206ENST00000605204 KRTAP7-1Q8IUC3 87 aa11.84□□□□□ -0.51
SRSF4-206ENST00000605204 FAM19A2Q8N3H0 131 aa11.84□□□□□ -0.51
SRSF4-206ENST00000605204 HSPB8Q9UJY1 196 aa11.84□□□□□ -0.51
SRSF4-206ENST00000605204 COX17Q14061 63 aa11.83□□□□□ -0.52
SRSF4-206ENST00000605204 PLA2G2DQ9UNK4 145 aa11.83□□□□□ -0.52
SRSF4-206ENST00000605204 LINC00310P59036 64 aa11.8□□□□□ -0.52
SRSF4-206ENST00000605204 C22orf24Q9Y442 160 aa11.8□□□□□ -0.52
SRSF4-206ENST00000605204 TNXBP22105 4242 aa11.8□□□□□ -0.52
SRSF4-206ENST00000605204 TMEM223A0PJW6 202 aa11.79□□□□□ -0.52
SRSF4-206ENST00000605204 IGLV7-43P04211 117 aa11.79□□□□□ -0.52
SRSF4-206ENST00000605204 LINC01600Q96MT4 127 aa11.79□□□□□ -0.52
SRSF4-206ENST00000605204 ERG28Q9UKR5 140 aa11.79□□□□□ -0.52
SRSF4-206ENST00000605204 NUPR1O60356 82 aa11.78□□□□□ -0.52
SRSF4-206ENST00000605204 PLNP26678 52 aa11.78□□□□□ -0.52
SRSF4-206ENST00000605204 MRPL55Q7Z7F7 128 aaKnown RBP11.78□□□□□ -0.52
SRSF4-206ENST00000605204 DIRC1Q969H9 104 aa11.78□□□□□ -0.52
SRSF4-206ENST00000605204 ZNF625Q96I27 306 aaPredicted RBP11.78□□□□□ -0.52
SRSF4-206ENST00000605204 IGLV5-37A0A075B6J1 123 aa11.77□□□□□ -0.53
SRSF4-206ENST00000605204 MT1HL1P0DM35 61 aa11.77□□□□□ -0.53
SRSF4-206ENST00000605204 PFN2P35080 140 aa11.77□□□□□ -0.53
SRSF4-206ENST00000605204 LRP2P98164 4655 aa11.77□□□□□ -0.53
SRSF4-206ENST00000605204 KRTAP11-1Q8IUC1 163 aa11.75□□□□□ -0.53
SRSF4-206ENST00000605204 H0Y8G0 127 aa11.74□□□□□ -0.53
SRSF4-206ENST00000605204 NKAPP1Q8N9T2 125 aa11.74□□□□□ -0.53
SRSF4-206ENST00000605204 LINC00587B1AMM8 73 aa11.73□□□□□ -0.53
SRSF4-206ENST00000605204 SCO1O75880 301 aa11.73□□□□□ -0.53
SRSF4-206ENST00000605204 HERV-K104P63124 156 aa11.73□□□□□ -0.53
SRSF4-206ENST00000605204 MAP1LC3CQ9BXW4 147 aa11.73□□□□□ -0.53
SRSF4-206ENST00000605204 SND1-IT1Q9HBX3 110 aa11.73□□□□□ -0.53
SRSF4-206ENST00000605204 HIST1H2BKO60814 126 aa11.72□□□□□ -0.53
SRSF4-206ENST00000605204 HIST1H2BJP06899 126 aa11.72□□□□□ -0.53
SRSF4-206ENST00000605204 FABP4P15090 132 aa11.72□□□□□ -0.53
SRSF4-206ENST00000605204 HIST1H2BOP23527 126 aa11.72□□□□□ -0.53
SRSF4-206ENST00000605204 HIST1H2BBP33778 126 aa11.72□□□□□ -0.53
SRSF4-206ENST00000605204 HIST1H2BDP58876 126 aa11.72□□□□□ -0.53
SRSF4-206ENST00000605204 HIST1H2BCP62807 126 aa11.72□□□□□ -0.53
SRSF4-206ENST00000605204 RPL24P83731 157 aaKnown RBP11.72□□□□□ -0.53
SRSF4-206ENST00000605204 HIST2H2BEQ16778 126 aa11.72□□□□□ -0.53
SRSF4-206ENST00000605204 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.72□□□□□ -0.53
SRSF4-206ENST00000605204 HIST1H2BHQ93079 126 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms