RNA–Protein interactions for RNA: ENST00000605166.1

HMGB1P51-201, Transcript of high mobility group box 1 pseudogene 51, humanhuman

BASIC

Gene HMGB1P51, Length 638 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P51-201ENST00000605166 KNDC1Q76NI1 1749 aa0.56□□□□□ -2.32
HMGB1P51-201ENST00000605166 KMT2DO14686 5537 aa0.56□□□□□ -2.32
HMGB1P51-201ENST00000605166 ETDBQ3ZM63 59 aa0.56□□□□□ -2.32
HMGB1P51-201ENST00000605166 BAZ1AQ9NRL2 1556 aaPredicted RBP0.56□□□□□ -2.32
HMGB1P51-201ENST00000605166 PIEZO1Q92508 2521 aa0.56□□□□□ -2.32
HMGB1P51-201ENST00000605166 A0A1B0GU69 56 aa0.55□□□□□ -2.32
HMGB1P51-201ENST00000605166 COX6B1P14854 86 aa0.55□□□□□ -2.32
HMGB1P51-201ENST00000605166 C6orf201Q7Z4U5 140 aa0.55□□□□□ -2.32
HMGB1P51-201ENST00000605166 V9GYS6 101 aa0.55□□□□□ -2.32
HMGB1P51-201ENST00000605166 SHPRHQ149N8 1683 aa0.55□□□□□ -2.32
HMGB1P51-201ENST00000605166 F8P00451 2351 aa0.54□□□□□ -2.32
HMGB1P51-201ENST00000605166 PPRC1Q5VV67 1664 aaKnown RBP0.54□□□□□ -2.32
HMGB1P51-201ENST00000605166 ATP10BO94823 1461 aa0.54□□□□□ -2.32
HMGB1P51-201ENST00000605166 IQSEC2Q5JU85 1478 aa0.54□□□□□ -2.32
HMGB1P51-201ENST00000605166 TARBP1Q13395 1621 aaKnown RBP0.53□□□□□ -2.32
HMGB1P51-201ENST00000605166 PAPPA2Q9BXP8 1791 aa0.53□□□□□ -2.32
HMGB1P51-201ENST00000605166 F8WEM9 126 aa0.53□□□□□ -2.32
HMGB1P51-201ENST00000605166 SPRR1AP35321 89 aa0.53□□□□□ -2.32
HMGB1P51-201ENST00000605166 GNGT1P63211 74 aa0.53□□□□□ -2.32
HMGB1P51-201ENST00000605166 DEFB109BQ30KR1 87 aa0.53□□□□□ -2.32
HMGB1P51-201ENST00000605166 ALKAL2Q6UX46 152 aa0.53□□□□□ -2.32
HMGB1P51-201ENST00000605166 C20orf78Q9BR46 151 aa0.53□□□□□ -2.32
HMGB1P51-201ENST00000605166 PSENENQ9NZ42 101 aa0.53□□□□□ -2.32
HMGB1P51-201ENST00000605166 HIGD1BQ9P298 99 aa0.53□□□□□ -2.32
HMGB1P51-201ENST00000605166 SMARCA2P51531 1590 aa0.53□□□□□ -2.33
HMGB1P51-201ENST00000605166 CHD9Q3L8U1 2897 aa0.52□□□□□ -2.33
HMGB1P51-201ENST00000605166 K7EQZ3 153 aa0.51□□□□□ -2.33
HMGB1P51-201ENST00000605166 EDC4Q6P2E9 1401 aaKnown RBP0.51□□□□□ -2.33
HMGB1P51-201ENST00000605166 MON2Q7Z3U7 1717 aa0.51□□□□□ -2.33
HMGB1P51-201ENST00000605166 SYNE1Q8NF91 8797 aaKnown RBP0.51□□□□□ -2.33
HMGB1P51-201ENST00000605166 SPTBN2O15020 2390 aa0.49□□□□□ -2.33
HMGB1P51-201ENST00000605166 PTPRZ1P23471 2315 aaPredicted RBP0.49□□□□□ -2.33
HMGB1P51-201ENST00000605166 D6R8Y8 96 aa0.49□□□□□ -2.33
HMGB1P51-201ENST00000605166 LEPROTL1O95214 131 aa0.49□□□□□ -2.33
HMGB1P51-201ENST00000605166 MUSTN1Q8IVN3 82 aa0.49□□□□□ -2.33
HMGB1P51-201ENST00000605166 USMG5Q96IX5 58 aa0.49□□□□□ -2.33
HMGB1P51-201ENST00000605166 IGF2RP11717 2491 aa0.49□□□□□ -2.33
HMGB1P51-201ENST00000605166 C2CD3Q4AC94 2353 aa0.49□□□□□ -2.33
HMGB1P51-201ENST00000605166 OTOGQ6ZRI0 2925 aa0.49□□□□□ -2.33
HMGB1P51-201ENST00000605166 PLCE1Q9P212 2302 aa0.49□□□□□ -2.33
HMGB1P51-201ENST00000605166 KIAA0556O60303 1618 aa0.49□□□□□ -2.33
HMGB1P51-201ENST00000605166 CUX1P39880 1505 aa0.48□□□□□ -2.33
HMGB1P51-201ENST00000605166 CEP162Q5TB80 1403 aa0.48□□□□□ -2.33
HMGB1P51-201ENST00000605166 PYY3Q5JQD4 70 aa0.48□□□□□ -2.33
HMGB1P51-201ENST00000605166 ZFYVE26Q68DK2 2539 aa0.48□□□□□ -2.33
HMGB1P51-201ENST00000605166 SPRR1BP22528 89 aa0.47□□□□□ -2.33
HMGB1P51-201ENST00000605166 SMIM11AP58511 58 aa0.47□□□□□ -2.33
HMGB1P51-201ENST00000605166 CCDC141Q6ZP82 1450 aa0.47□□□□□ -2.33
HMGB1P51-201ENST00000605166 C5P01031 1676 aa0.46□□□□□ -2.34
HMGB1P51-201ENST00000605166 USF3Q68DE3 2245 aa0.46□□□□□ -2.34
HMGB1P51-201ENST00000605166 MDN1Q9NU22 5596 aa0.46□□□□□ -2.34
HMGB1P51-201ENST00000605166 GOLGA4Q13439 2230 aaKnown RBP0.45□□□□□ -2.34
HMGB1P51-201ENST00000605166 PVALEFA0A1B0GWK0 134 aa0.45□□□□□ -2.34
HMGB1P51-201ENST00000605166 MYO3AQ8NEV4 1616 aa0.45□□□□□ -2.34
HMGB1P51-201ENST00000605166 KIAA1551Q9HCM1 1747 aa0.44□□□□□ -2.34
HMGB1P51-201ENST00000605166 ABCC3O15438 1527 aa0.44□□□□□ -2.34
HMGB1P51-201ENST00000605166 TSC2P49815 1807 aa0.44□□□□□ -2.34
HMGB1P51-201ENST00000605166 GNG2P59768 71 aa0.44□□□□□ -2.34
HMGB1P51-201ENST00000605166 PEA15Q15121 130 aa0.44□□□□□ -2.34
HMGB1P51-201ENST00000605166 SAMD9Q5K651 1589 aa0.44□□□□□ -2.34
HMGB1P51-201ENST00000605166 ZNF292O60281 2723 aa0.44□□□□□ -2.34
HMGB1P51-201ENST00000605166 RGPD4Q7Z3J3 1758 aa0.43□□□□□ -2.34
HMGB1P51-201ENST00000605166 MYH4Q9Y623 1939 aa0.43□□□□□ -2.34
HMGB1P51-201ENST00000605166 HMGN2P05204 90 aaKnown RBP0.43□□□□□ -2.34
HMGB1P51-201ENST00000605166 COX8AP10176 69 aa0.43□□□□□ -2.34
HMGB1P51-201ENST00000605166 CRYBG1Q9Y4K1 1723 aa0.43□□□□□ -2.34
HMGB1P51-201ENST00000605166 FSIP2Q5CZC0 6907 aa0.43□□□□□ -2.34
HMGB1P51-201ENST00000605166 SYNE2Q8WXH0 6885 aaKnown RBP0.43□□□□□ -2.34
HMGB1P51-201ENST00000605166 SLIT1O75093 1534 aa0.43□□□□□ -2.34
HMGB1P51-201ENST00000605166 FAT4Q6V0I7 4981 aa0.43□□□□□ -2.34
HMGB1P51-201ENST00000605166 DNAJC13O75165 2243 aa0.42□□□□□ -2.34
HMGB1P51-201ENST00000605166 LRP1Q07954 4544 aaKnown RBP0.42□□□□□ -2.34
HMGB1P51-201ENST00000605166 K7EP34 96 aa0.42□□□□□ -2.34
HMGB1P51-201ENST00000605166 MAST4O15021 2626 aa0.42□□□□□ -2.34
HMGB1P51-201ENST00000605166 LRRC37AA6NMS7 1700 aa0.41□□□□□ -2.34
HMGB1P51-201ENST00000605166 C9orf62Q8N4C0 152 aa0.41□□□□□ -2.34
HMGB1P51-201ENST00000605166 UBE2D4Q9Y2X8 147 aa0.41□□□□□ -2.34
HMGB1P51-201ENST00000605166 PLIN4Q96Q06 1357 aa0.4□□□□□ -2.35
HMGB1P51-201ENST00000605166 IGSF10Q6WRI0 2623 aa0.39□□□□□ -2.35
HMGB1P51-201ENST00000605166 ANKRD36A6QL64 1941 aa0.39□□□□□ -2.35
HMGB1P51-201ENST00000605166 IGLC2P0DOY2 106 aa0.39□□□□□ -2.35
HMGB1P51-201ENST00000605166 IGLC3P0DOY3 106 aa0.39□□□□□ -2.35
HMGB1P51-201ENST00000605166 CRIPTQ9P021 101 aa0.39□□□□□ -2.35
HMGB1P51-201ENST00000605166 RGPD3A6NKT7 1758 aaPredicted RBP0.39□□□□□ -2.35
HMGB1P51-201ENST00000605166 UBR1Q8IWV7 1749 aa0.38□□□□□ -2.35
HMGB1P51-201ENST00000605166 S100A16Q96FQ6 103 aaKnown RBP0.38□□□□□ -2.35
HMGB1P51-201ENST00000605166 FMN2Q9NZ56 1722 aa0.38□□□□□ -2.35
HMGB1P51-201ENST00000605166 CSMD3Q7Z407 3707 aa0.37□□□□□ -2.35
HMGB1P51-201ENST00000605166 NMSQ5H8A3 153 aa0.37□□□□□ -2.35
HMGB1P51-201ENST00000605166 CYB5AP00167 134 aa0.36□□□□□ -2.35
HMGB1P51-201ENST00000605166 NEXMIFQ5QGS0 1516 aa0.36□□□□□ -2.35
HMGB1P51-201ENST00000605166 NKTRP30414 1462 aaKnown RBP0.35□□□□□ -2.35
HMGB1P51-201ENST00000605166 UNC79Q9P2D8 2635 aa0.35□□□□□ -2.35
HMGB1P51-201ENST00000605166 PIEZO2Q9H5I5 2752 aa0.34□□□□□ -2.35
HMGB1P51-201ENST00000605166 I3L3M4 83 aa0.34□□□□□ -2.36
HMGB1P51-201ENST00000605166 SPINK4O60575 86 aa0.34□□□□□ -2.36
HMGB1P51-201ENST00000605166 DEFB105AQ8NG35 78 aa0.34□□□□□ -2.36
HMGB1P51-201ENST00000605166 RABAC1Q9UI14 185 aa0.34□□□□□ -2.36
HMGB1P51-201ENST00000605166 NCOR2Q9Y618 2525 aa0.34□□□□□ -2.36
HMGB1P51-201ENST00000605166 ALKQ9UM73 1620 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 165.7 ms