RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 C10orf25Q5T742 122 aa7.23□□□□□ -1.25
CCDC12-209ENST00000604164 ATP5LO75964 103 aa7.22□□□□□ -1.25
CCDC12-209ENST00000604164 PDZD11Q5EBL8 140 aa7.22□□□□□ -1.25
CCDC12-209ENST00000604164 C2orf82Q6UX34 121 aa7.22□□□□□ -1.25
CCDC12-209ENST00000604164 DMBT1Q9UGM3 2413 aaPredicted RBP7.22□□□□□ -1.25
CCDC12-209ENST00000604164 IGLV5-45A0A087WSX0 123 aa7.21□□□□□ -1.26
CCDC12-209ENST00000604164 A0A1W2PNN7 141 aa7.21□□□□□ -1.26
CCDC12-209ENST00000604164 F8VRH5 84 aa7.21□□□□□ -1.26
CCDC12-209ENST00000604164 HNRNPA3P51991 378 aaKnown RBP7.21□□□□□ -1.26
CCDC12-209ENST00000604164 GAGE2EQ4V326 116 aa7.21□□□□□ -1.26
CCDC12-209ENST00000604164 GAGE2DQ9UEU5 116 aa7.21□□□□□ -1.26
CCDC12-209ENST00000604164 NDUFA6P56556 154 aa7.2□□□□□ -1.26
CCDC12-209ENST00000604164 SPINK6Q6UWN8 80 aa7.2□□□□□ -1.26
CCDC12-209ENST00000604164 CHCHD1Q96BP2 118 aaKnown RBP7.2□□□□□ -1.26
CCDC12-209ENST00000604164 YPEL4Q96NS1 127 aa7.2□□□□□ -1.26
CCDC12-209ENST00000604164 SMIM1B2RUZ4 78 aa7.19□□□□□ -1.26
CCDC12-209ENST00000604164 COX7B2Q8TF08 81 aa7.19□□□□□ -1.26
CCDC12-209ENST00000604164 IGLC3P0DOY3 106 aa7.18□□□□□ -1.26
CCDC12-209ENST00000604164 REG3GQ6UW15 175 aa7.18□□□□□ -1.26
CCDC12-209ENST00000604164 A0A096LNJ9 63 aa7.17□□□□□ -1.26
CCDC12-209ENST00000604164 SERTAD4-AS1Q5TG53 156 aa7.17□□□□□ -1.26
CCDC12-209ENST00000604164 FAM19A5Q7Z5A7 132 aaPredicted RBP7.17□□□□□ -1.26
CCDC12-209ENST00000604164 CBLN2Q8IUK8 224 aa7.17□□□□□ -1.26
CCDC12-209ENST00000604164 URB1-AS1Q96HZ7 61 aa7.17□□□□□ -1.26
CCDC12-209ENST00000604164 MYCBP2O75592 4640 aa7.16□□□□□ -1.26
CCDC12-209ENST00000604164 M0QXV9 152 aa7.16□□□□□ -1.26
CCDC12-209ENST00000604164 SPINK8P0C7L1 97 aa7.16□□□□□ -1.26
CCDC12-209ENST00000604164 ODF1Q14990 250 aa7.16□□□□□ -1.26
CCDC12-209ENST00000604164 PMCHL1Q16048 86 aa7.16□□□□□ -1.26
CCDC12-209ENST00000604164 SFTA2Q6UW10 78 aa7.16□□□□□ -1.26
CCDC12-209ENST00000604164 PHF5AQ7RTV0 110 aaKnown RBP7.16□□□□□ -1.26
CCDC12-209ENST00000604164 FAM168BA1KXE4 195 aa7.15□□□□□ -1.26
CCDC12-209ENST00000604164 UBE2BP63146 152 aa7.15□□□□□ -1.26
CCDC12-209ENST00000604164 BAGE3Q86Y29 109 aa7.15□□□□□ -1.26
CCDC12-209ENST00000604164 PSORS1C2Q9UIG4 136 aa7.15□□□□□ -1.26
CCDC12-209ENST00000604164 HSBP1O75506 76 aa7.14□□□□□ -1.27
CCDC12-209ENST00000604164 LBHQ53QV2 105 aaPredicted RBP7.14□□□□□ -1.27
CCDC12-209ENST00000604164 C1orf137Q5JT78 98 aa7.14□□□□□ -1.27
CCDC12-209ENST00000604164 C9orf129Q5T035 196 aaKnown RBP7.14□□□□□ -1.27
CCDC12-209ENST00000604164 SLC7A5P1Q8MH63 180 aa7.14□□□□□ -1.27
CCDC12-209ENST00000604164 IFI27L1Q96BM0 104 aa7.14□□□□□ -1.27
CCDC12-209ENST00000604164 TRAV12-1A0A0B4J245 112 aa7.13□□□□□ -1.27
CCDC12-209ENST00000604164 ZNF22P17026 224 aaPredicted RBP7.13□□□□□ -1.27
CCDC12-209ENST00000604164 SRSF9Q13242 221 aaKnown RBP eCLIP7.13□□□□□ -1.27
CCDC12-209ENST00000604164 TMEM170BQ5T4T1 132 aa7.13□□□□□ -1.27
CCDC12-209ENST00000604164 CHTOPQ9Y3Y2 248 aaKnown RBP7.13□□□□□ -1.27
CCDC12-209ENST00000604164 IGLV5-39A0A0G2JS06 123 aa7.12□□□□□ -1.27
CCDC12-209ENST00000604164 TRGC2P03986 189 aa7.12□□□□□ -1.27
CCDC12-209ENST00000604164 LINC01600Q96MT4 127 aa7.12□□□□□ -1.27
CCDC12-209ENST00000604164 XAGE1AQ9HD64 81 aa7.12□□□□□ -1.27
CCDC12-209ENST00000604164 TP73-AS1Q9UF72 201 aa7.12□□□□□ -1.27
CCDC12-209ENST00000604164 COX17Q14061 63 aa7.11□□□□□ -1.27
CCDC12-209ENST00000604164 DIRC1Q969H9 104 aa7.11□□□□□ -1.27
CCDC12-209ENST00000604164 C11orf86A6NJI1 115 aa7.1□□□□□ -1.27
CCDC12-209ENST00000604164 IGLV7-43P04211 117 aa7.1□□□□□ -1.27
CCDC12-209ENST00000604164 C22orf24Q9Y442 160 aa7.1□□□□□ -1.27
CCDC12-209ENST00000604164 NUPR1O60356 82 aa7.09□□□□□ -1.27
CCDC12-209ENST00000604164 KRTAP7-1Q8IUC3 87 aa7.09□□□□□ -1.27
CCDC12-209ENST00000604164 HSPB8Q9UJY1 196 aa7.09□□□□□ -1.27
CCDC12-209ENST00000604164 PLA2G2DQ9UNK4 145 aa7.09□□□□□ -1.27
CCDC12-209ENST00000604164 LEPROTL1O95214 131 aa7.08□□□□□ -1.28
CCDC12-209ENST00000604164 MT1HL1P0DM35 61 aa7.08□□□□□ -1.28
CCDC12-209ENST00000604164 MRPL55Q7Z7F7 128 aaKnown RBP7.08□□□□□ -1.28
CCDC12-209ENST00000604164 COLCA2A8K830 154 aa7.07□□□□□ -1.28
CCDC12-209ENST00000604164 SERF1AO75920 110 aa7.07□□□□□ -1.28
CCDC12-209ENST00000604164 PFN2P35080 140 aa7.07□□□□□ -1.28
CCDC12-209ENST00000604164 FAM19A2Q8N3H0 131 aa7.07□□□□□ -1.28
CCDC12-209ENST00000604164 NKAPP1Q8N9T2 125 aa7.07□□□□□ -1.28
CCDC12-209ENST00000604164 ERG28Q9UKR5 140 aa7.07□□□□□ -1.28
CCDC12-209ENST00000604164 PKHD1L1Q86WI1 4243 aa7.06□□□□□ -1.28
CCDC12-209ENST00000604164 HERC1Q15751 4861 aa7.06□□□□□ -1.28
CCDC12-209ENST00000604164 IGLV5-37A0A075B6J1 123 aa7.06□□□□□ -1.28
CCDC12-209ENST00000604164 TMEM223A0PJW6 202 aa7.06□□□□□ -1.28
CCDC12-209ENST00000604164 LINC00587B1AMM8 73 aa7.05□□□□□ -1.28
CCDC12-209ENST00000604164 H0Y9J4 135 aa7.05□□□□□ -1.28
CCDC12-209ENST00000604164 PLNP26678 52 aa7.05□□□□□ -1.28
CCDC12-209ENST00000604164 RPL24P83731 157 aaKnown RBP7.05□□□□□ -1.28
CCDC12-209ENST00000604164 KRTAP11-1Q8IUC1 163 aa7.05□□□□□ -1.28
CCDC12-209ENST00000604164 H0Y8G0 127 aa7.04□□□□□ -1.28
CCDC12-209ENST00000604164 ATP6V1G1O75348 118 aa7.04□□□□□ -1.28
CCDC12-209ENST00000604164 HERV-K104P63124 156 aa7.04□□□□□ -1.28
CCDC12-209ENST00000604164 ZNF625Q96I27 306 aaPredicted RBP7.04□□□□□ -1.28
CCDC12-209ENST00000604164 ZNF861PO60384 105 aa7.03□□□□□ -1.28
CCDC12-209ENST00000604164 RPL28P46779 137 aaKnown RBP7.03□□□□□ -1.28
CCDC12-209ENST00000604164 LINC00158P58513 81 aa7.03□□□□□ -1.28
CCDC12-209ENST00000604164 LINC00167Q96N53 147 aa7.03□□□□□ -1.28
CCDC12-209ENST00000604164 SND1-IT1Q9HBX3 110 aa7.03□□□□□ -1.28
CCDC12-209ENST00000604164 BCE1O60756 84 aa7.02□□□□□ -1.29
CCDC12-209ENST00000604164 KRTAP10-8P60410 259 aa7.02□□□□□ -1.29
CCDC12-209ENST00000604164 HERVK_113P61574 105 aa7.02□□□□□ -1.29
CCDC12-209ENST00000604164 MAP1LC3CQ9BXW4 147 aa7.02□□□□□ -1.29
CCDC12-209ENST00000604164 LRP1Q07954 4544 aaKnown RBP7.02□□□□□ -1.29
CCDC12-209ENST00000604164 MYMXA0A1B0GTQ4 84 aa7.01□□□□□ -1.29
CCDC12-209ENST00000604164 RPL37AP8A6NKH3 93 aa7.01□□□□□ -1.29
CCDC12-209ENST00000604164 DPM2O94777 84 aa7.01□□□□□ -1.29
CCDC12-209ENST00000604164 FABP4P15090 132 aa7.01□□□□□ -1.29
CCDC12-209ENST00000604164 LINC00310P59036 64 aa7.01□□□□□ -1.29
CCDC12-209ENST00000604164 PLEKHB2Q96CS7 222 aa7.01□□□□□ -1.29
CCDC12-209ENST00000604164 IGLV1-50A0A075B6I6 118 aa7□□□□□ -1.29
CCDC12-209ENST00000604164 GAGE10A6NGK3 116 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms