RNA–Protein interactions for RNA: ENST00000602251.5

LTBP4-231, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 2

Gene LTBP4, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-231	ENST00000602251	HBD	P02042	147 aa		11.46	□□□□□ -0.57
LTBP4-231	ENST00000602251	GAGE2B	Q13066	116 aa		11.46	□□□□□ -0.57
LTBP4-231	ENST00000602251	PMVK	Q15126	192 aa		11.46	□□□□□ -0.57
LTBP4-231	ENST00000602251	NDUFA6	P56556	154 aa		11.45	□□□□□ -0.58
LTBP4-231	ENST00000602251	PMCHL1	Q16048	86 aa		11.45	□□□□□ -0.58
LTBP4-231	ENST00000602251	STPG4	Q8N801	248 aa		11.45	□□□□□ -0.58
LTBP4-231	ENST00000602251	URB1-AS1	Q96HZ7	61 aa		11.45	□□□□□ -0.58
LTBP4-231	ENST00000602251	CST9L	Q9H4G1	147 aa		11.45	□□□□□ -0.58
LTBP4-231	ENST00000602251	MRPL35	Q9NZE8	188 aa	Known RBP	11.45	□□□□□ -0.58
LTBP4-231	ENST00000602251	TOMM7	Q9P0U1	55 aa		11.45	□□□□□ -0.58
LTBP4-231	ENST00000602251	KRTAP9-6	A0A140TA67	174 aa		11.44	□□□□□ -0.58
LTBP4-231	ENST00000602251	RPL18A	Q02543	176 aa	Known RBP	11.44	□□□□□ -0.58
LTBP4-231	ENST00000602251	RNF151	Q2KHN1	245 aa		11.44	□□□□□ -0.58
LTBP4-231	ENST00000602251	LINC00469	Q8N7U9	141 aa		11.44	□□□□□ -0.58
LTBP4-231	ENST00000602251	CDKN2A-AS1	Q9UH64	79 aa		11.44	□□□□□ -0.58
LTBP4-231	ENST00000602251	TINCR	A0A1B0GVN0	87 aa		11.43	□□□□□ -0.58
LTBP4-231	ENST00000602251	PTTG1IP	P53801	180 aa		11.43	□□□□□ -0.58
LTBP4-231	ENST00000602251	SRSF9	Q13242	221 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
LTBP4-231	ENST00000602251	UNQ6190/PRO20217	Q6UXQ8	127 aa		11.43	□□□□□ -0.58
LTBP4-231	ENST00000602251	ATP5L	O75964	103 aa		11.42	□□□□□ -0.58
LTBP4-231	ENST00000602251	CKS1B	P61024	79 aa		11.42	□□□□□ -0.58
LTBP4-231	ENST00000602251	C6orf226	Q5I0X4	101 aa		11.42	□□□□□ -0.58
LTBP4-231	ENST00000602251	CHCHD1	Q96BP2	118 aa	Known RBP	11.42	□□□□□ -0.58
LTBP4-231	ENST00000602251		A0A096LNJ9	63 aa		11.41	□□□□□ -0.58
LTBP4-231	ENST00000602251	TRGC2	P03986	189 aa		11.41	□□□□□ -0.58
LTBP4-231	ENST00000602251	KIAA0087	Q14695	138 aa		11.41	□□□□□ -0.58
LTBP4-231	ENST00000602251	BAGE3	Q86Y29	109 aa		11.41	□□□□□ -0.58
LTBP4-231	ENST00000602251	FAT4	Q6V0I7	4981 aa		11.41	□□□□□ -0.58
LTBP4-231	ENST00000602251	C10orf25	Q5T742	122 aa		11.4	□□□□□ -0.58
LTBP4-231	ENST00000602251	TRBV30	A0A0K0K1B3	111 aa		11.39	□□□□□ -0.59
LTBP4-231	ENST00000602251	C2orf82	Q6UX34	121 aa		11.39	□□□□□ -0.59
LTBP4-231	ENST00000602251		Q8IZM0	81 aa		11.39	□□□□□ -0.59
LTBP4-231	ENST00000602251	C6orf48	Q9UBA6	75 aa		11.39	□□□□□ -0.59
LTBP4-231	ENST00000602251		H3BRM9	83 aa		11.38	□□□□□ -0.59
LTBP4-231	ENST00000602251	PDZD11	Q5EBL8	140 aa		11.38	□□□□□ -0.59
LTBP4-231	ENST00000602251	HSBP1	O75506	76 aa		11.37	□□□□□ -0.59
LTBP4-231	ENST00000602251	COLCA2	A8K830	154 aa		11.36	□□□□□ -0.59
LTBP4-231	ENST00000602251	IGLV5-45	A0A087WSX0	123 aa		11.35	□□□□□ -0.59
LTBP4-231	ENST00000602251	SMIM1	B2RUZ4	78 aa		11.35	□□□□□ -0.59
LTBP4-231	ENST00000602251	TLX1NB	P0CAT3	122 aa		11.35	□□□□□ -0.59
LTBP4-231	ENST00000602251	GAGE2E	Q4V326	116 aa		11.35	□□□□□ -0.59
LTBP4-231	ENST00000602251	GAGE2D	Q9UEU5	116 aa		11.35	□□□□□ -0.59
LTBP4-231	ENST00000602251	SPINK8	P0C7L1	97 aa		11.34	□□□□□ -0.59
LTBP4-231	ENST00000602251	IGLC3	P0DOY3	106 aa		11.34	□□□□□ -0.59
LTBP4-231	ENST00000602251	CXCL5	P42830	114 aa		11.34	□□□□□ -0.59
LTBP4-231	ENST00000602251	COX7B2	Q8TF08	81 aa		11.34	□□□□□ -0.59
LTBP4-231	ENST00000602251	C9orf116	Q5BN46	136 aa	Predicted RBP	11.33	□□□□□ -0.6
LTBP4-231	ENST00000602251		Q6ZRP5	223 aa		11.33	□□□□□ -0.6
LTBP4-231	ENST00000602251	NDUFC2-KCTD14	E9PQ53	114 aa		11.32	□□□□□ -0.6
LTBP4-231	ENST00000602251		F8VRH5	84 aa		11.32	□□□□□ -0.6
LTBP4-231	ENST00000602251	FAM19A2	Q8N3H0	131 aa		11.32	□□□□□ -0.6
LTBP4-231	ENST00000602251	IFI27L1	Q96BM0	104 aa		11.32	□□□□□ -0.6
LTBP4-231	ENST00000602251		A0A0U1RQV1	116 aa		11.31	□□□□□ -0.6
LTBP4-231	ENST00000602251	SCO1	O75880	301 aa		11.31	□□□□□ -0.6
LTBP4-231	ENST00000602251	CHTOP	Q9Y3Y2	248 aa	Known RBP	11.31	□□□□□ -0.6
LTBP4-231	ENST00000602251		A0A1W2PNN7	141 aa		11.3	□□□□□ -0.6
LTBP4-231	ENST00000602251	SERF1A	O75920	110 aa		11.3	□□□□□ -0.6
LTBP4-231	ENST00000602251	TMEM170B	Q5T4T1	132 aa		11.3	□□□□□ -0.6
LTBP4-231	ENST00000602251	ZNF22	P17026	224 aa	Predicted RBP	11.29	□□□□□ -0.6
LTBP4-231	ENST00000602251	TRAV12-1	A0A0B4J245	112 aa		11.27	□□□□□ -0.61
LTBP4-231	ENST00000602251	C11orf86	A6NJI1	115 aa		11.27	□□□□□ -0.61
LTBP4-231	ENST00000602251	LEPROTL1	O95214	131 aa		11.27	□□□□□ -0.61
LTBP4-231	ENST00000602251	LCE2A	Q5TA79	106 aa	Predicted RBP	11.27	□□□□□ -0.61
LTBP4-231	ENST00000602251		H0Y8G0	127 aa		11.26	□□□□□ -0.61
LTBP4-231	ENST00000602251	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	11.26	□□□□□ -0.61
LTBP4-231	ENST00000602251	FAM168B	A1KXE4	195 aa		11.25	□□□□□ -0.61
LTBP4-231	ENST00000602251	PHF5A	Q7RTV0	110 aa	Known RBP	11.24	□□□□□ -0.61
LTBP4-231	ENST00000602251	PSORS1C2	Q9UIG4	136 aa		11.24	□□□□□ -0.61
LTBP4-231	ENST00000602251	HSPB8	Q9UJY1	196 aa		11.24	□□□□□ -0.61
LTBP4-231	ENST00000602251	IGLV5-39	A0A0G2JS06	123 aa		11.23	□□□□□ -0.61
LTBP4-231	ENST00000602251	FABP4	P15090	132 aa		11.23	□□□□□ -0.61
LTBP4-231	ENST00000602251	LINC00310	P59036	64 aa		11.22	□□□□□ -0.61
LTBP4-231	ENST00000602251	C9orf129	Q5T035	196 aa	Known RBP	11.22	□□□□□ -0.61
LTBP4-231	ENST00000602251	XAGE1A	Q9HD64	81 aa		11.22	□□□□□ -0.61
LTBP4-231	ENST00000602251	NUPR1	O60356	82 aa		11.21	□□□□□ -0.61
LTBP4-231	ENST00000602251		M0QXV9	152 aa		11.2	□□□□□ -0.62
LTBP4-231	ENST00000602251	PRR26	Q8N8Z3	221 aa		11.2	□□□□□ -0.62
LTBP4-231	ENST00000602251	HIST1H2BK	O60814	126 aa		11.19	□□□□□ -0.62
LTBP4-231	ENST00000602251	HIST1H2BJ	P06899	126 aa		11.19	□□□□□ -0.62
LTBP4-231	ENST00000602251	HIST1H2BO	P23527	126 aa		11.19	□□□□□ -0.62
LTBP4-231	ENST00000602251	HIST1H2BB	P33778	126 aa		11.19	□□□□□ -0.62
LTBP4-231	ENST00000602251	HIST1H2BD	P58876	126 aa		11.19	□□□□□ -0.62
LTBP4-231	ENST00000602251	HIST1H2BC	P62807	126 aa		11.19	□□□□□ -0.62
LTBP4-231	ENST00000602251	UBE2B	P63146	152 aa		11.19	□□□□□ -0.62
LTBP4-231	ENST00000602251	HIST2H2BE	Q16778	126 aa		11.19	□□□□□ -0.62
LTBP4-231	ENST00000602251	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	11.19	□□□□□ -0.62
LTBP4-231	ENST00000602251	SFTA2	Q6UW10	78 aa		11.19	□□□□□ -0.62
LTBP4-231	ENST00000602251	HIST1H2BH	Q93079	126 aa		11.19	□□□□□ -0.62
LTBP4-231	ENST00000602251	HIST1H2BN	Q99877	126 aa		11.19	□□□□□ -0.62
LTBP4-231	ENST00000602251	HIST1H2BM	Q99879	126 aa		11.19	□□□□□ -0.62
LTBP4-231	ENST00000602251	TMEM223	A0PJW6	202 aa		11.18	□□□□□ -0.62
LTBP4-231	ENST00000602251	PFN2	P35080	140 aa		11.18	□□□□□ -0.62
LTBP4-231	ENST00000602251	PRR4	Q16378	134 aa		11.17	□□□□□ -0.62
LTBP4-231	ENST00000602251	C1orf137	Q5JT78	98 aa		11.16	□□□□□ -0.62
LTBP4-231	ENST00000602251	ZNF625	Q96I27	306 aa	Predicted RBP	11.16	□□□□□ -0.62
LTBP4-231	ENST00000602251	MAP1LC3C	Q9BXW4	147 aa		11.16	□□□□□ -0.62
LTBP4-231	ENST00000602251	S100A1	P23297	94 aa		11.15	□□□□□ -0.62
LTBP4-231	ENST00000602251	PLN	P26678	52 aa		11.15	□□□□□ -0.62
LTBP4-231	ENST00000602251	ERG28	Q9UKR5	140 aa		11.15	□□□□□ -0.62
LTBP4-231	ENST00000602251	COX17	Q14061	63 aa		11.14	□□□□□ -0.63

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