RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 SCGB1D4Q6XE38 83 aa12.23□□□□□ -0.45
SSBP4-212ENST00000601919 CAMK2N2Q96S95 79 aa12.23□□□□□ -0.45
SSBP4-212ENST00000601919 TTTY13Q9BZ97 58 aa12.23□□□□□ -0.45
SSBP4-212ENST00000601919 PRO1933Q9H354 126 aa12.23□□□□□ -0.45
SSBP4-212ENST00000601919 LRCOL1A6NCL2 159 aa12.21□□□□□ -0.45
SSBP4-212ENST00000601919 C2orf82Q6UX34 121 aa12.21□□□□□ -0.45
SSBP4-212ENST00000601919 LINC00526Q96FQ7 95 aa12.21□□□□□ -0.45
SSBP4-212ENST00000601919 MIEN1Q9BRT3 115 aa12.21□□□□□ -0.45
SSBP4-212ENST00000601919 DNAH6Q9C0G6 4158 aa12.2□□□□□ -0.46
SSBP4-212ENST00000601919 EREGO14944 169 aa12.2□□□□□ -0.46
SSBP4-212ENST00000601919 CIRBPQ14011 172 aaKnown RBP12.2□□□□□ -0.46
SSBP4-212ENST00000601919 A0A0J9YXY3 114 aa12.19□□□□□ -0.46
SSBP4-212ENST00000601919 TRBV30A0A0K0K1B3 111 aa12.19□□□□□ -0.46
SSBP4-212ENST00000601919 SYCNQ0VAF6 134 aa12.19□□□□□ -0.46
SSBP4-212ENST00000601919 A0A087WTM6 91 aa12.18□□□□□ -0.46
SSBP4-212ENST00000601919 WFDC2Q14508 124 aa12.18□□□□□ -0.46
SSBP4-212ENST00000601919 MEIG1Q5JSS6 88 aa12.18□□□□□ -0.46
SSBP4-212ENST00000601919 UNQ6190/PRO20217Q6UXQ8 127 aa12.18□□□□□ -0.46
SSBP4-212ENST00000601919 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.17□□□□□ -0.46
SSBP4-212ENST00000601919 CARD19Q96LW7 228 aa12.17□□□□□ -0.46
SSBP4-212ENST00000601919 TMEM238C9JI98 176 aa12.16□□□□□ -0.46
SSBP4-212ENST00000601919 TIMM17BO60830 172 aa12.16□□□□□ -0.46
SSBP4-212ENST00000601919 COX17Q14061 63 aa12.16□□□□□ -0.46
SSBP4-212ENST00000601919 Q8N814 137 aa12.16□□□□□ -0.46
SSBP4-212ENST00000601919 HIGD1BQ9P298 99 aa12.16□□□□□ -0.46
SSBP4-212ENST00000601919 RTL8CO15255 209 aa12.15□□□□□ -0.46
SSBP4-212ENST00000601919 HNRNPA3P51991 378 aaKnown RBP12.15□□□□□ -0.46
SSBP4-212ENST00000601919 CNBPP62633 177 aaKnown RBP12.15□□□□□ -0.46
SSBP4-212ENST00000601919 RNF151Q2KHN1 245 aa12.15□□□□□ -0.46
SSBP4-212ENST00000601919 Q6ZRU5 148 aa12.15□□□□□ -0.46
SSBP4-212ENST00000601919 ERG28Q9UKR5 140 aa12.15□□□□□ -0.46
SSBP4-212ENST00000601919 C10orf25Q5T742 122 aa12.14□□□□□ -0.47
SSBP4-212ENST00000601919 TP73-AS1Q9UF72 201 aa12.14□□□□□ -0.47
SSBP4-212ENST00000601919 KMT2AQ03164 3969 aa12.13□□□□□ -0.47
SSBP4-212ENST00000601919 LINC00158P58513 81 aa12.13□□□□□ -0.47
SSBP4-212ENST00000601919 C6orf48Q9UBA6 75 aa12.13□□□□□ -0.47
SSBP4-212ENST00000601919 PFN2P35080 140 aa12.12□□□□□ -0.47
SSBP4-212ENST00000601919 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.11□□□□□ -0.47
SSBP4-212ENST00000601919 SLPIP03973 132 aa12.11□□□□□ -0.47
SSBP4-212ENST00000601919 SMIM13P0DJ93 91 aa12.11□□□□□ -0.47
SSBP4-212ENST00000601919 GCSHP23434 173 aa12.11□□□□□ -0.47
SSBP4-212ENST00000601919 TNP2Q05952 138 aa12.11□□□□□ -0.47
SSBP4-212ENST00000601919 LINC00336Q6ZUF6 198 aa12.11□□□□□ -0.47
SSBP4-212ENST00000601919 C2orf91Q6ZV80 131 aa12.11□□□□□ -0.47
SSBP4-212ENST00000601919 Q6ZVH6 145 aa12.11□□□□□ -0.47
SSBP4-212ENST00000601919 SPANXB1Q9NS25 103 aaPredicted RBP12.11□□□□□ -0.47
SSBP4-212ENST00000601919 PKIGQ9Y2B9 76 aa12.11□□□□□ -0.47
SSBP4-212ENST00000601919 SRSF9Q13242 221 aaKnown RBP eCLIP12.1□□□□□ -0.47
SSBP4-212ENST00000601919 COPS9Q8WXC6 57 aa12.1□□□□□ -0.47
SSBP4-212ENST00000601919 DDTP30046 118 aa12.09□□□□□ -0.47
SSBP4-212ENST00000601919 C9orf116Q5BN46 136 aaPredicted RBP12.09□□□□□ -0.47
SSBP4-212ENST00000601919 A0A0U1RRA0 63 aa12.08□□□□□ -0.48
SSBP4-212ENST00000601919 TAL2Q16559 108 aa12.08□□□□□ -0.48
SSBP4-212ENST00000601919 HIST1H4GQ99525 98 aa12.08□□□□□ -0.48
SSBP4-212ENST00000601919 LITAFQ99732 161 aa12.08□□□□□ -0.48
SSBP4-212ENST00000601919 SPANXDQ9BXN6 97 aa12.08□□□□□ -0.48
SSBP4-212ENST00000601919 SPANXCQ9NY87 97 aa12.08□□□□□ -0.48
SSBP4-212ENST00000601919 NDUFC2-KCTD14E9PQ53 114 aa12.07□□□□□ -0.48
SSBP4-212ENST00000601919 TLX1NBP0CAT3 122 aa12.06□□□□□ -0.48
SSBP4-212ENST00000601919 IFITM1P13164 125 aa12.06□□□□□ -0.48
SSBP4-212ENST00000601919 MIR7-3HGQ8N6C7 128 aa12.06□□□□□ -0.48
SSBP4-212ENST00000601919 LOC107984640A0A0U1RRK4 108 aa12.05□□□□□ -0.48
SSBP4-212ENST00000601919 HSD52Q0P140 79 aa12.05□□□□□ -0.48
SSBP4-212ENST00000601919 ADAMTSL4-AS1Q5T5F5 129 aa12.05□□□□□ -0.48
SSBP4-212ENST00000601919 C9orf163Q8N9P6 203 aa12.05□□□□□ -0.48
SSBP4-212ENST00000601919 DNAH10Q8IVF4 4471 aa12.04□□□□□ -0.48
SSBP4-212ENST00000601919 PCP4L1A6NKN8 68 aa12.03□□□□□ -0.48
SSBP4-212ENST00000601919 CTAG1AP78358 180 aa12.03□□□□□ -0.48
SSBP4-212ENST00000601919 DAND5Q8N907 189 aa12.03□□□□□ -0.48
SSBP4-212ENST00000601919 SACSQ9NZJ4 4579 aa12.03□□□□□ -0.48
SSBP4-212ENST00000601919 IGLV5-52A0A0A0MRZ9 124 aa12.02□□□□□ -0.49
SSBP4-212ENST00000601919 PTTG1IPP53801 180 aa12.02□□□□□ -0.49
SSBP4-212ENST00000601919 RPL18AQ02543 176 aaKnown RBP12.02□□□□□ -0.49
SSBP4-212ENST00000601919 PPDPFQ9H3Y8 114 aa12.02□□□□□ -0.49
SSBP4-212ENST00000601919 LINC00308Q8TCZ7 52 aa12.01□□□□□ -0.49
SSBP4-212ENST00000601919 SND1-IT1Q9HBX3 110 aa12.01□□□□□ -0.49
SSBP4-212ENST00000601919 PGPEP1Q9NXJ5 209 aa12.01□□□□□ -0.49
SSBP4-212ENST00000601919 M0R143 59 aa12□□□□□ -0.49
SSBP4-212ENST00000601919 RPL24P83731 157 aaKnown RBP12□□□□□ -0.49
SSBP4-212ENST00000601919 CEND1Q8N111 149 aa12□□□□□ -0.49
SSBP4-212ENST00000601919 GAGE2EQ4V326 116 aa11.99□□□□□ -0.49
SSBP4-212ENST00000601919 Q6ZRP5 223 aa11.99□□□□□ -0.49
SSBP4-212ENST00000601919 MUSTN1Q8IVN3 82 aa11.99□□□□□ -0.49
SSBP4-212ENST00000601919 GAGE2DQ9UEU5 116 aa11.99□□□□□ -0.49
SSBP4-212ENST00000601919 DNAH2Q9P225 4427 aa11.99□□□□□ -0.49
SSBP4-212ENST00000601919 LOC107984156A0A0G2JMH3 177 aa11.98□□□□□ -0.49
SSBP4-212ENST00000601919 TMEM238LA0A1B0GVL6 79 aa11.98□□□□□ -0.49
SSBP4-212ENST00000601919 A6NJY4 79 aa11.98□□□□□ -0.49
SSBP4-212ENST00000601919 NPC2P61916 151 aa11.98□□□□□ -0.49
SSBP4-212ENST00000601919 GAGE2BQ13066 116 aa11.98□□□□□ -0.49
SSBP4-212ENST00000601919 ARL17AQ8IVW1 177 aa11.98□□□□□ -0.49
SSBP4-212ENST00000601919 HYDINQ4G0P3 5121 aa11.98□□□□□ -0.49
SSBP4-212ENST00000601919 C16orf90A8MZG2 172 aa11.97□□□□□ -0.49
SSBP4-212ENST00000601919 LINC00474Q9P2X8 69 aa11.96□□□□□ -0.49
SSBP4-212ENST00000601919 XAGE1AQ9HD64 81 aa11.95□□□□□ -0.5
SSBP4-212ENST00000601919 DNAH17Q9UFH2 4485 aa11.95□□□□□ -0.5
SSBP4-212ENST00000601919 SOSTDC1Q6X4U4 206 aa11.94□□□□□ -0.5
SSBP4-212ENST00000601919 SDIM1Q6ZPB5 146 aa11.94□□□□□ -0.5
SSBP4-212ENST00000601919 HINT1P49773 126 aaPredicted RBP11.93□□□□□ -0.5
SSBP4-212ENST00000601919 BVES-AS1Q5T3Y7 98 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms