RNA–Protein interactions for RNA: ENST00000596125.1

GTPBP3-212, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 2

Gene GTPBP3, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-212ENST00000596125 CXCL5P42830 114 aa12.49□□□□□ -0.41
GTPBP3-212ENST00000596125 SMCO4Q9NRQ5 59 aa12.49□□□□□ -0.41
GTPBP3-212ENST00000596125 TOMM7Q9P0U1 55 aa12.49□□□□□ -0.41
GTPBP3-212ENST00000596125 PSORS1C2Q9UIG4 136 aa12.49□□□□□ -0.41
GTPBP3-212ENST00000596125 ZC2HC1BQ5TFG8 222 aa12.48□□□□□ -0.41
GTPBP3-212ENST00000596125 C2orf82Q6UX34 121 aa12.48□□□□□ -0.41
GTPBP3-212ENST00000596125 PHF5AQ7RTV0 110 aaKnown RBP12.47□□□□□ -0.41
GTPBP3-212ENST00000596125 MRPL18Q9H0U6 180 aaKnown RBP12.47□□□□□ -0.41
GTPBP3-212ENST00000596125 CDKN2A-AS1Q9UH64 79 aa12.47□□□□□ -0.41
GTPBP3-212ENST00000596125 TINCRA0A1B0GVN0 87 aa12.46□□□□□ -0.41
GTPBP3-212ENST00000596125 ODF1Q14990 250 aa12.46□□□□□ -0.41
GTPBP3-212ENST00000596125 NDUFA5Q16718 116 aa12.46□□□□□ -0.41
GTPBP3-212ENST00000596125 C1orf137Q5JT78 98 aa12.46□□□□□ -0.41
GTPBP3-212ENST00000596125 F8VRH5 84 aa12.45□□□□□ -0.42
GTPBP3-212ENST00000596125 LINC00469Q8N7U9 141 aa12.45□□□□□ -0.42
GTPBP3-212ENST00000596125 PDZD11Q5EBL8 140 aa12.44□□□□□ -0.42
GTPBP3-212ENST00000596125 FAM19A5Q7Z5A7 132 aaPredicted RBP12.44□□□□□ -0.42
GTPBP3-212ENST00000596125 PMVKQ15126 192 aa12.43□□□□□ -0.42
GTPBP3-212ENST00000596125 DIRC1Q969H9 104 aa12.43□□□□□ -0.42
GTPBP3-212ENST00000596125 CST9LQ9H4G1 147 aa12.43□□□□□ -0.42
GTPBP3-212ENST00000596125 M0QXV9 152 aa12.42□□□□□ -0.42
GTPBP3-212ENST00000596125 SNAPINO95295 136 aa12.42□□□□□ -0.42
GTPBP3-212ENST00000596125 UBE2BP63146 152 aa12.42□□□□□ -0.42
GTPBP3-212ENST00000596125 IGLV5-45A0A087WSX0 123 aa12.41□□□□□ -0.42
GTPBP3-212ENST00000596125 FAM168BA1KXE4 195 aa12.41□□□□□ -0.42
GTPBP3-212ENST00000596125 H3BRM9 83 aa12.41□□□□□ -0.42
GTPBP3-212ENST00000596125 IGLV7-43P04211 117 aa12.41□□□□□ -0.42
GTPBP3-212ENST00000596125 SVBPQ8N300 66 aa12.41□□□□□ -0.42
GTPBP3-212ENST00000596125 TRAPPC1Q9Y5R8 145 aa12.41□□□□□ -0.42
GTPBP3-212ENST00000596125 KRTAP10-8P60410 259 aa12.4□□□□□ -0.42
GTPBP3-212ENST00000596125 RAB5BP61020 215 aa12.4□□□□□ -0.42
GTPBP3-212ENST00000596125 LBHQ53QV2 105 aaPredicted RBP12.4□□□□□ -0.42
GTPBP3-212ENST00000596125 SMIM1B2RUZ4 78 aa12.38□□□□□ -0.43
GTPBP3-212ENST00000596125 APOC3P02656 99 aa12.38□□□□□ -0.43
GTPBP3-212ENST00000596125 LINC00614P0C842 121 aa12.38□□□□□ -0.43
GTPBP3-212ENST00000596125 C9orf129Q5T035 196 aaKnown RBP12.38□□□□□ -0.43
GTPBP3-212ENST00000596125 COX7B2Q8TF08 81 aa12.38□□□□□ -0.43
GTPBP3-212ENST00000596125 TP73-AS1Q9UF72 201 aa12.35□□□□□ -0.43
GTPBP3-212ENST00000596125 HBDP02042 147 aa12.34□□□□□ -0.43
GTPBP3-212ENST00000596125 C18orf32Q8TCD1 76 aa12.34□□□□□ -0.43
GTPBP3-212ENST00000596125 NUPR1O60356 82 aa12.33□□□□□ -0.44
GTPBP3-212ENST00000596125 ATP5LO75964 103 aa12.33□□□□□ -0.44
GTPBP3-212ENST00000596125 KRTAP7-1Q8IUC3 87 aa12.33□□□□□ -0.44
GTPBP3-212ENST00000596125 H0Y9J4 135 aa12.32□□□□□ -0.44
GTPBP3-212ENST00000596125 XAGE1AQ9HD64 81 aa12.32□□□□□ -0.44
GTPBP3-212ENST00000596125 C22orf24Q9Y442 160 aa12.32□□□□□ -0.44
GTPBP3-212ENST00000596125 IGLC3P0DOY3 106 aa12.31□□□□□ -0.44
GTPBP3-212ENST00000596125 NDUFA6P56556 154 aa12.31□□□□□ -0.44
GTPBP3-212ENST00000596125 SPINK8P0C7L1 97 aa12.3□□□□□ -0.44
GTPBP3-212ENST00000596125 SFTA2Q6UW10 78 aa12.3□□□□□ -0.44
GTPBP3-212ENST00000596125 MRPL55Q7Z7F7 128 aaKnown RBP12.28□□□□□ -0.44
GTPBP3-212ENST00000596125 KRTAP11-1Q8IUC1 163 aa12.28□□□□□ -0.44
GTPBP3-212ENST00000596125 TNXBP22105 4242 aa12.28□□□□□ -0.44
GTPBP3-212ENST00000596125 IGLV1-50A0A075B6I6 118 aa12.27□□□□□ -0.45
GTPBP3-212ENST00000596125 A0A096LNJ9 63 aa12.26□□□□□ -0.45
GTPBP3-212ENST00000596125 IGLV5-39A0A0G2JS06 123 aa12.26□□□□□ -0.45
GTPBP3-212ENST00000596125 ZNF861PO60384 105 aa12.26□□□□□ -0.45
GTPBP3-212ENST00000596125 BAGE3Q86Y29 109 aa12.25□□□□□ -0.45
GTPBP3-212ENST00000596125 CHCHD1Q96BP2 118 aaKnown RBP12.25□□□□□ -0.45
GTPBP3-212ENST00000596125 URB1-AS1Q96HZ7 61 aa12.25□□□□□ -0.45
GTPBP3-212ENST00000596125 RPL13AP40429 203 aaKnown RBP12.24□□□□□ -0.45
GTPBP3-212ENST00000596125 COX17Q14061 63 aa12.24□□□□□ -0.45
GTPBP3-212ENST00000596125 ZNF22P17026 224 aaPredicted RBP12.23□□□□□ -0.45
GTPBP3-212ENST00000596125 RPL28P46779 137 aaKnown RBP12.23□□□□□ -0.45
GTPBP3-212ENST00000596125 NKAPP1Q8N9T2 125 aa12.23□□□□□ -0.45
GTPBP3-212ENST00000596125 IGLV5-37A0A075B6J1 123 aa12.22□□□□□ -0.45
GTPBP3-212ENST00000596125 BCE1O60756 84 aa12.2□□□□□ -0.46
GTPBP3-212ENST00000596125 PMCHL1Q16048 86 aa12.2□□□□□ -0.46
GTPBP3-212ENST00000596125 TMEM170BQ5T4T1 132 aa12.2□□□□□ -0.46
GTPBP3-212ENST00000596125 TRAV12-1A0A0B4J245 112 aa12.19□□□□□ -0.46
GTPBP3-212ENST00000596125 PRR26Q8N8Z3 221 aa12.19□□□□□ -0.46
GTPBP3-212ENST00000596125 LINC00167Q96N53 147 aa12.19□□□□□ -0.46
GTPBP3-212ENST00000596125 CHTOPQ9Y3Y2 248 aaKnown RBP12.19□□□□□ -0.46
GTPBP3-212ENST00000596125 RPL24P83731 157 aaKnown RBP12.18□□□□□ -0.46
GTPBP3-212ENST00000596125 YPEL4Q96NS1 127 aa12.18□□□□□ -0.46
GTPBP3-212ENST00000596125 ERG28Q9UKR5 140 aa12.18□□□□□ -0.46
GTPBP3-212ENST00000596125 PFN2P35080 140 aa12.17□□□□□ -0.46
GTPBP3-212ENST00000596125 IFI27L1Q96BM0 104 aa12.17□□□□□ -0.46
GTPBP3-212ENST00000596125 C11orf86A6NJI1 115 aa12.16□□□□□ -0.46
GTPBP3-212ENST00000596125 KRTAP1-4P0C5Y4 121 aa12.15□□□□□ -0.46
GTPBP3-212ENST00000596125 HSBP1O75506 76 aa12.14□□□□□ -0.47
GTPBP3-212ENST00000596125 RPL37AP8A6NKH3 93 aa12.13□□□□□ -0.47
GTPBP3-212ENST00000596125 SND1-IT1Q9HBX3 110 aa12.13□□□□□ -0.47
GTPBP3-212ENST00000596125 GAGE10A6NGK3 116 aa12.11□□□□□ -0.47
GTPBP3-212ENST00000596125 LINC00587B1AMM8 73 aa12.11□□□□□ -0.47
GTPBP3-212ENST00000596125 ZNF625Q96I27 306 aaPredicted RBP12.11□□□□□ -0.47
GTPBP3-212ENST00000596125 UBE2AP49459 152 aa12.1□□□□□ -0.47
GTPBP3-212ENST00000596125 TMEM223A0PJW6 202 aa12.09□□□□□ -0.47
GTPBP3-212ENST00000596125 ATP6V1G1O75348 118 aa12.09□□□□□ -0.47
GTPBP3-212ENST00000596125 CBLN2Q8IUK8 224 aa12.09□□□□□ -0.47
GTPBP3-212ENST00000596125 LINC00158P58513 81 aa12.08□□□□□ -0.48
GTPBP3-212ENST00000596125 HERV-K104P63124 156 aa12.08□□□□□ -0.48
GTPBP3-212ENST00000596125 CRYGAP11844 174 aa12.07□□□□□ -0.48
GTPBP3-212ENST00000596125 VPREB1P12018 145 aa12.07□□□□□ -0.48
GTPBP3-212ENST00000596125 TRGC2P03986 189 aa12.06□□□□□ -0.48
GTPBP3-212ENST00000596125 IGKV2-28A0A075B6P5 120 aa12.05□□□□□ -0.48
GTPBP3-212ENST00000596125 LEPROTL1O95214 131 aa12.05□□□□□ -0.48
GTPBP3-212ENST00000596125 IGKV2D-28P01615 120 aa12.05□□□□□ -0.48
GTPBP3-212ENST00000596125 FAM19A2Q8N3H0 131 aa12.04□□□□□ -0.48
GTPBP3-212ENST00000596125 HSPB8Q9UJY1 196 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms