RNA–Protein interactions for RNA: ENST00000593049.5

DNMT1-229, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-229ENST00000593049 H3BRM9 83 aa10.33□□□□□ -0.76
DNMT1-229ENST00000593049 CXCL5P42830 114 aa10.33□□□□□ -0.76
DNMT1-229ENST00000593049 NDUFA6P56556 154 aa10.33□□□□□ -0.76
DNMT1-229ENST00000593049 PMCHL1Q16048 86 aa10.33□□□□□ -0.76
DNMT1-229ENST00000593049 SMIM1B2RUZ4 78 aa10.32□□□□□ -0.76
DNMT1-229ENST00000593049 TRGC2P03986 189 aa10.32□□□□□ -0.76
DNMT1-229ENST00000593049 IGLC3P0DOY3 106 aa10.32□□□□□ -0.76
DNMT1-229ENST00000593049 C2orf82Q6UX34 121 aa10.32□□□□□ -0.76
DNMT1-229ENST00000593049 BAGE3Q86Y29 109 aa10.31□□□□□ -0.76
DNMT1-229ENST00000593049 NDUFC2-KCTD14E9PQ53 114 aa10.3□□□□□ -0.76
DNMT1-229ENST00000593049 F8VRH5 84 aa10.3□□□□□ -0.76
DNMT1-229ENST00000593049 C9orf116Q5BN46 136 aaPredicted RBP10.3□□□□□ -0.76
DNMT1-229ENST00000593049 Q6ZRP5 223 aa10.3□□□□□ -0.76
DNMT1-229ENST00000593049 FLG2Q5D862 2391 aaPredicted RBP10.3□□□□□ -0.76
DNMT1-229ENST00000593049 COLCA2A8K830 154 aa10.29□□□□□ -0.76
DNMT1-229ENST00000593049 HSBP1O75506 76 aa10.29□□□□□ -0.76
DNMT1-229ENST00000593049 COX7B2Q8TF08 81 aa10.29□□□□□ -0.76
DNMT1-229ENST00000593049 A0A1W2PNN7 141 aa10.28□□□□□ -0.76
DNMT1-229ENST00000593049 IFI27L1Q96BM0 104 aa10.28□□□□□ -0.76
DNMT1-229ENST00000593049 S100A1P23297 94 aa10.27□□□□□ -0.77
DNMT1-229ENST00000593049 GAGE2EQ4V326 116 aa10.27□□□□□ -0.77
DNMT1-229ENST00000593049 GAGE2DQ9UEU5 116 aa10.27□□□□□ -0.77
DNMT1-229ENST00000593049 KRTAP29-1A8MX34 341 aaPredicted RBP10.26□□□□□ -0.77
DNMT1-229ENST00000593049 SPINK8P0C7L1 97 aa10.26□□□□□ -0.77
DNMT1-229ENST00000593049 PRR3P79522 188 aaKnown RBP10.26□□□□□ -0.77
DNMT1-229ENST00000593049 TRAV12-1A0A0B4J245 112 aa10.25□□□□□ -0.77
DNMT1-229ENST00000593049 OXTP01178 125 aa10.25□□□□□ -0.77
DNMT1-229ENST00000593049 ZNF22P17026 224 aaPredicted RBP10.25□□□□□ -0.77
DNMT1-229ENST00000593049 CHTOPQ9Y3Y2 248 aaKnown RBP10.25□□□□□ -0.77
DNMT1-229ENST00000593049 J3QL48 77 aa10.24□□□□□ -0.77
DNMT1-229ENST00000593049 IGLV5-39A0A0G2JS06 123 aa10.23□□□□□ -0.77
DNMT1-229ENST00000593049 TMEM170BQ5T4T1 132 aa10.23□□□□□ -0.77
DNMT1-229ENST00000593049 DMBT1Q9UGM3 2413 aaPredicted RBP10.22□□□□□ -0.77
DNMT1-229ENST00000593049 SERF1AO75920 110 aa10.22□□□□□ -0.77
DNMT1-229ENST00000593049 HNRNPA3P51991 378 aaKnown RBP10.22□□□□□ -0.77
DNMT1-229ENST00000593049 SFTA2Q6UW10 78 aa10.22□□□□□ -0.77
DNMT1-229ENST00000593049 FAM19A2Q8N3H0 131 aa10.22□□□□□ -0.77
DNMT1-229ENST00000593049 C11orf86A6NJI1 115 aa10.21□□□□□ -0.77
DNMT1-229ENST00000593049 FAM19A5Q7Z5A7 132 aaPredicted RBP10.21□□□□□ -0.77
DNMT1-229ENST00000593049 MYCBP2O75592 4640 aa10.21□□□□□ -0.78
DNMT1-229ENST00000593049 LEPROTL1O95214 131 aa10.2□□□□□ -0.78
DNMT1-229ENST00000593049 C9orf129Q5T035 196 aaKnown RBP10.2□□□□□ -0.78
DNMT1-229ENST00000593049 PHF5AQ7RTV0 110 aaKnown RBP10.2□□□□□ -0.78
DNMT1-229ENST00000593049 HSPB8Q9UJY1 196 aa10.2□□□□□ -0.78
DNMT1-229ENST00000593049 FAM168BA1KXE4 195 aa10.19□□□□□ -0.78
DNMT1-229ENST00000593049 ODF1Q14990 250 aa10.19□□□□□ -0.78
DNMT1-229ENST00000593049 M0QXV9 152 aa10.18□□□□□ -0.78
DNMT1-229ENST00000593049 ATP6V1G1O75348 118 aa10.18□□□□□ -0.78
DNMT1-229ENST00000593049 SCO1O75880 301 aa10.18□□□□□ -0.78
DNMT1-229ENST00000593049 LINC00310P59036 64 aa10.17□□□□□ -0.78
DNMT1-229ENST00000593049 SPINK6Q6UWN8 80 aa10.17□□□□□ -0.78
DNMT1-229ENST00000593049 PSORS1C2Q9UIG4 136 aa10.17□□□□□ -0.78
DNMT1-229ENST00000593049 XAGE1AQ9HD64 81 aa10.16□□□□□ -0.78
DNMT1-229ENST00000593049 TMEM223A0PJW6 202 aa10.15□□□□□ -0.78
DNMT1-229ENST00000593049 UBE2BP63146 152 aa10.15□□□□□ -0.78
DNMT1-229ENST00000593049 COX17Q14061 63 aa10.15□□□□□ -0.78
DNMT1-229ENST00000593049 LBHQ53QV2 105 aaPredicted RBP10.15□□□□□ -0.78
DNMT1-229ENST00000593049 H0Y8G0 127 aa10.14□□□□□ -0.79
DNMT1-229ENST00000593049 KRTAP7-1Q8IUC3 87 aa10.14□□□□□ -0.79
DNMT1-229ENST00000593049 TP73-AS1Q9UF72 201 aa10.14□□□□□ -0.79
DNMT1-229ENST00000593049 PKHD1L1Q86WI1 4243 aa10.14□□□□□ -0.79
DNMT1-229ENST00000593049 NUPR1O60356 82 aa10.13□□□□□ -0.79
DNMT1-229ENST00000593049 FABP4P15090 132 aa10.13□□□□□ -0.79
DNMT1-229ENST00000593049 PLNP26678 52 aa10.13□□□□□ -0.79
DNMT1-229ENST00000593049 SRSF9Q13242 221 aaKnown RBP eCLIP10.13□□□□□ -0.79
DNMT1-229ENST00000593049 C1orf137Q5JT78 98 aa10.13□□□□□ -0.79
DNMT1-229ENST00000593049 ERG28Q9UKR5 140 aa10.13□□□□□ -0.79
DNMT1-229ENST00000593049 PLA2G2DQ9UNK4 145 aa10.13□□□□□ -0.79
DNMT1-229ENST00000593049 HIST1H2BKO60814 126 aa10.12□□□□□ -0.79
DNMT1-229ENST00000593049 HIST1H2BJP06899 126 aa10.12□□□□□ -0.79
DNMT1-229ENST00000593049 HIST1H2BOP23527 126 aa10.12□□□□□ -0.79
DNMT1-229ENST00000593049 HIST1H2BBP33778 126 aa10.12□□□□□ -0.79
DNMT1-229ENST00000593049 HIST1H2BDP58876 126 aa10.12□□□□□ -0.79
DNMT1-229ENST00000593049 HIST1H2BCP62807 126 aa10.12□□□□□ -0.79
DNMT1-229ENST00000593049 HIST2H2BEQ16778 126 aa10.12□□□□□ -0.79
DNMT1-229ENST00000593049 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.12□□□□□ -0.79
DNMT1-229ENST00000593049 REG3GQ6UW15 175 aa10.12□□□□□ -0.79
DNMT1-229ENST00000593049 HIST1H2BHQ93079 126 aa10.12□□□□□ -0.79
DNMT1-229ENST00000593049 HIST1H2BNQ99877 126 aa10.12□□□□□ -0.79
DNMT1-229ENST00000593049 HIST1H2BMQ99879 126 aa10.12□□□□□ -0.79
DNMT1-229ENST00000593049 C22orf24Q9Y442 160 aa10.12□□□□□ -0.79
DNMT1-229ENST00000593049 PFN2P35080 140 aa10.11□□□□□ -0.79
DNMT1-229ENST00000593049 SERTAD4-AS1Q5TG53 156 aa10.11□□□□□ -0.79
DNMT1-229ENST00000593049 ZNF625Q96I27 306 aaPredicted RBP10.11□□□□□ -0.79
DNMT1-229ENST00000593049 MAP1LC3CQ9BXW4 147 aa10.11□□□□□ -0.79
DNMT1-229ENST00000593049 DPM2O94777 84 aa10.09□□□□□ -0.79
DNMT1-229ENST00000593049 IGLV7-43P04211 117 aa10.09□□□□□ -0.79
DNMT1-229ENST00000593049 MRPL55Q7Z7F7 128 aaKnown RBP10.09□□□□□ -0.79
DNMT1-229ENST00000593049 IGLV5-37A0A075B6J1 123 aa10.08□□□□□ -0.8
DNMT1-229ENST00000593049 HERV-K104P63124 156 aa10.08□□□□□ -0.8
DNMT1-229ENST00000593049 NKAPP1Q8N9T2 125 aa10.08□□□□□ -0.8
DNMT1-229ENST00000593049 LINC00587B1AMM8 73 aa10.07□□□□□ -0.8
DNMT1-229ENST00000593049 HERVK_113P61574 105 aa10.07□□□□□ -0.8
DNMT1-229ENST00000593049 DIRC1Q969H9 104 aa10.07□□□□□ -0.8
DNMT1-229ENST00000593049 IGKCP01834 107 aa10.06□□□□□ -0.8
DNMT1-229ENST00000593049 KRTAP11-1Q8IUC1 163 aa10.06□□□□□ -0.8
DNMT1-229ENST00000593049 PLEKHB2Q96CS7 222 aa10.06□□□□□ -0.8
DNMT1-229ENST00000593049 LINC01600Q96MT4 127 aa10.06□□□□□ -0.8
DNMT1-229ENST00000593049 SND1-IT1Q9HBX3 110 aa10.06□□□□□ -0.8
DNMT1-229ENST00000593049 LRP1Q07954 4544 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms