RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 A0A0J9YXV3 536 aa6.46□□□□□ -1.38
VPS4B-207ENST00000591519 IGIPA6NJ69 53 aa6.46□□□□□ -1.38
VPS4B-207ENST00000591519 G0S2P27469 103 aa6.46□□□□□ -1.38
VPS4B-207ENST00000591519 SYCNQ0VAF6 134 aa6.46□□□□□ -1.38
VPS4B-207ENST00000591519 PMCHL1Q16048 86 aa6.46□□□□□ -1.38
VPS4B-207ENST00000591519 ORAOV1Q8WV07 137 aa6.46□□□□□ -1.38
VPS4B-207ENST00000591519 CARD19Q96LW7 228 aa6.46□□□□□ -1.38
VPS4B-207ENST00000591519 C9orf118A6NHY6 69 aa6.45□□□□□ -1.38
VPS4B-207ENST00000591519 SCO1O75880 301 aa6.45□□□□□ -1.38
VPS4B-207ENST00000591519 UBE2D1P51668 147 aa6.45□□□□□ -1.38
VPS4B-207ENST00000591519 SPAG11BQ08648 103 aa6.45□□□□□ -1.38
VPS4B-207ENST00000591519 LINC00242Q5T6M2 205 aa6.45□□□□□ -1.38
VPS4B-207ENST00000591519 Q6ZRP5 223 aa6.45□□□□□ -1.38
VPS4B-207ENST00000591519 URB1-AS1Q96HZ7 61 aa6.45□□□□□ -1.38
VPS4B-207ENST00000591519 AMELXQ99217 191 aa6.45□□□□□ -1.38
VPS4B-207ENST00000591519 TNXBP22105 4242 aa6.45□□□□□ -1.38
VPS4B-207ENST00000591519 IGHV3OR16-9A0A0B4J2B5 98 aa6.44□□□□□ -1.38
VPS4B-207ENST00000591519 LINC01546A6NGU7 62 aa6.44□□□□□ -1.38
VPS4B-207ENST00000591519 APOMO95445 188 aa6.44□□□□□ -1.38
VPS4B-207ENST00000591519 PTTG1IPP53801 180 aa6.44□□□□□ -1.38
VPS4B-207ENST00000591519 REG3GQ6UW15 175 aa6.44□□□□□ -1.38
VPS4B-207ENST00000591519 ERASQ7Z444 233 aa6.44□□□□□ -1.38
VPS4B-207ENST00000591519 CAMK2N2Q96S95 79 aa6.44□□□□□ -1.38
VPS4B-207ENST00000591519 TIMM17AQ99595 171 aa6.44□□□□□ -1.38
VPS4B-207ENST00000591519 LOC107984640A0A0U1RRK4 108 aa6.43□□□□□ -1.38
VPS4B-207ENST00000591519 TRGC2P03986 189 aa6.43□□□□□ -1.38
VPS4B-207ENST00000591519 LINC00614P0C842 121 aa6.43□□□□□ -1.38
VPS4B-207ENST00000591519 NDUFA6P56556 154 aa6.43□□□□□ -1.38
VPS4B-207ENST00000591519 PAPPA-AS1Q5QFB9 102 aa6.43□□□□□ -1.38
VPS4B-207ENST00000591519 RAB5BP61020 215 aa6.42□□□□□ -1.38
VPS4B-207ENST00000591519 C2orf48Q96LS8 159 aa6.42□□□□□ -1.38
VPS4B-207ENST00000591519 LRP2P98164 4655 aa6.42□□□□□ -1.38
VPS4B-207ENST00000591519 A0A087WZ39 114 aa6.41□□□□□ -1.38
VPS4B-207ENST00000591519 A0A096LNJ9 63 aa6.41□□□□□ -1.38
VPS4B-207ENST00000591519 A0A1W2PNN7 141 aa6.41□□□□□ -1.38
VPS4B-207ENST00000591519 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.41□□□□□ -1.38
VPS4B-207ENST00000591519 HBDP02042 147 aa6.41□□□□□ -1.38
VPS4B-207ENST00000591519 NPSP0C0P6 89 aa6.41□□□□□ -1.38
VPS4B-207ENST00000591519 RNF151Q2KHN1 245 aa6.41□□□□□ -1.38
VPS4B-207ENST00000591519 BAGE3Q86Y29 109 aa6.41□□□□□ -1.38
VPS4B-207ENST00000591519 OR10D4PQ8NGN7 298 aa6.41□□□□□ -1.38
VPS4B-207ENST00000591519 GEMIN7Q9H840 131 aaKnown RBP6.41□□□□□ -1.38
VPS4B-207ENST00000591519 TOMM7Q9P0U1 55 aa6.41□□□□□ -1.38
VPS4B-207ENST00000591519 COLCA2A8K830 154 aa6.4□□□□□ -1.38
VPS4B-207ENST00000591519 GAGE2BQ13066 116 aa6.4□□□□□ -1.38
VPS4B-207ENST00000591519 C10orf25Q5T742 122 aa6.4□□□□□ -1.38
VPS4B-207ENST00000591519 C2orf82Q6UX34 121 aa6.4□□□□□ -1.38
VPS4B-207ENST00000591519 LINC00469Q8N7U9 141 aa6.4□□□□□ -1.38
VPS4B-207ENST00000591519 CST9LQ9H4G1 147 aa6.4□□□□□ -1.38
VPS4B-207ENST00000591519 CDKN2A-AS1Q9UH64 79 aa6.4□□□□□ -1.38
VPS4B-207ENST00000591519 LINC01549A6NIU2 74 aa6.39□□□□□ -1.39
VPS4B-207ENST00000591519 F8WDY8 70 aa6.39□□□□□ -1.39
VPS4B-207ENST00000591519 HERVK_113P63121 156 aa6.39□□□□□ -1.39
VPS4B-207ENST00000591519 RPL18AQ02543 176 aaKnown RBP6.39□□□□□ -1.39
VPS4B-207ENST00000591519 PMVKQ15126 192 aa6.39□□□□□ -1.39
VPS4B-207ENST00000591519 UNQ6190/PRO20217Q6UXQ8 127 aa6.39□□□□□ -1.39
VPS4B-207ENST00000591519 PACRGQ96M98 296 aaPredicted RBP6.39□□□□□ -1.39
VPS4B-207ENST00000591519 NDUFA1O15239 70 aa6.38□□□□□ -1.39
VPS4B-207ENST00000591519 PRSS2P07478 247 aa6.38□□□□□ -1.39
VPS4B-207ENST00000591519 SEC11AP67812 179 aa6.38□□□□□ -1.39
VPS4B-207ENST00000591519 ODF1Q14990 250 aa6.38□□□□□ -1.39
VPS4B-207ENST00000591519 C9orf116Q5BN46 136 aaPredicted RBP6.38□□□□□ -1.39
VPS4B-207ENST00000591519 PDZD11Q5EBL8 140 aa6.38□□□□□ -1.39
VPS4B-207ENST00000591519 FAM19A2Q8N3H0 131 aa6.38□□□□□ -1.39
VPS4B-207ENST00000591519 SPINK8P0C7L1 97 aa6.37□□□□□ -1.39
VPS4B-207ENST00000591519 KIAA0087Q14695 138 aa6.37□□□□□ -1.39
VPS4B-207ENST00000591519 FAM19A3Q7Z5A8 133 aa6.37□□□□□ -1.39
VPS4B-207ENST00000591519 CHCHD1Q96BP2 118 aaKnown RBP6.37□□□□□ -1.39
VPS4B-207ENST00000591519 MRPL35Q9NZE8 188 aaKnown RBP6.37□□□□□ -1.39
VPS4B-207ENST00000591519 PSORS1C2Q9UIG4 136 aa6.37□□□□□ -1.39
VPS4B-207ENST00000591519 TINCRA0A1B0GVN0 87 aa6.36□□□□□ -1.39
VPS4B-207ENST00000591519 HSBP1O75506 76 aa6.36□□□□□ -1.39
VPS4B-207ENST00000591519 SERF1AO75920 110 aa6.36□□□□□ -1.39
VPS4B-207ENST00000591519 ATP5LO75964 103 aa6.36□□□□□ -1.39
VPS4B-207ENST00000591519 C6orf226Q5I0X4 101 aa6.36□□□□□ -1.39
VPS4B-207ENST00000591519 LINC01561Q8N1V8 128 aa6.36□□□□□ -1.39
VPS4B-207ENST00000591519 C6orf48Q9UBA6 75 aa6.36□□□□□ -1.39
VPS4B-207ENST00000591519 RNF213Q63HN8 5207 aa6.36□□□□□ -1.39
VPS4B-207ENST00000591519 H0Y8G0 127 aa6.35□□□□□ -1.39
VPS4B-207ENST00000591519 TLX1NBP0CAT3 122 aa6.35□□□□□ -1.39
VPS4B-207ENST00000591519 CKS1BP61024 79 aa6.35□□□□□ -1.39
VPS4B-207ENST00000591519 GAGE2EQ4V326 116 aa6.35□□□□□ -1.39
VPS4B-207ENST00000591519 GAGE2DQ9UEU5 116 aa6.35□□□□□ -1.39
VPS4B-207ENST00000591519 SMIM1B2RUZ4 78 aa6.34□□□□□ -1.39
VPS4B-207ENST00000591519 NUPR1O60356 82 aa6.34□□□□□ -1.39
VPS4B-207ENST00000591519 PHF5AQ7RTV0 110 aaKnown RBP6.34□□□□□ -1.39
VPS4B-207ENST00000591519 Q8IZM0 81 aa6.34□□□□□ -1.39
VPS4B-207ENST00000591519 COX7B2Q8TF08 81 aa6.34□□□□□ -1.39
VPS4B-207ENST00000591519 IFI27L1Q96BM0 104 aa6.34□□□□□ -1.39
VPS4B-207ENST00000591519 CHTOPQ9Y3Y2 248 aaKnown RBP6.34□□□□□ -1.39
VPS4B-207ENST00000591519 C11orf86A6NJI1 115 aa6.33□□□□□ -1.4
VPS4B-207ENST00000591519 H3BRM9 83 aa6.33□□□□□ -1.4
VPS4B-207ENST00000591519 IGLC3P0DOY3 106 aa6.33□□□□□ -1.4
VPS4B-207ENST00000591519 FABP4P15090 132 aa6.33□□□□□ -1.4
VPS4B-207ENST00000591519 C1orf137Q5JT78 98 aa6.33□□□□□ -1.4
VPS4B-207ENST00000591519 IGLV5-45A0A087WSX0 123 aa6.32□□□□□ -1.4
VPS4B-207ENST00000591519 IGLV7-43P04211 117 aa6.32□□□□□ -1.4
VPS4B-207ENST00000591519 ZNF22P17026 224 aaPredicted RBP6.32□□□□□ -1.4
VPS4B-207ENST00000591519 TMEM170BQ5T4T1 132 aa6.32□□□□□ -1.4
VPS4B-207ENST00000591519 DIRC1Q969H9 104 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms