RNA–Protein interactions for RNA: ENST00000590959.5

SPHK1-207, Transcript of sphingosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPHK1, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-207ENST00000590959 CSDC2Q9Y534 153 aaKnown RBP13.53□□□□□ -0.24
SPHK1-207ENST00000590959 TRBV6-8A0A0A6YYG3 113 aa13.53□□□□□ -0.24
SPHK1-207ENST00000590959 DGAT2L7PQ6IED9 249 aa13.53□□□□□ -0.24
SPHK1-207ENST00000590959 NTN5Q8WTR8 489 aaPredicted RBP13.53□□□□□ -0.24
SPHK1-207ENST00000590959 UBE2L6O14933 153 aa13.52□□□□□ -0.25
SPHK1-207ENST00000590959 TRAV8-4A0A0B4J246 113 aa13.51□□□□□ -0.25
SPHK1-207ENST00000590959 ADAMTSL4-AS1Q5T5F5 129 aa13.51□□□□□ -0.25
SPHK1-207ENST00000590959 C2orf82Q6UX34 121 aa13.51□□□□□ -0.25
SPHK1-207ENST00000590959 H7C423 109 aa13.5□□□□□ -0.25
SPHK1-207ENST00000590959 LST1O00453 97 aa13.5□□□□□ -0.25
SPHK1-207ENST00000590959 SNCGO76070 127 aa13.5□□□□□ -0.25
SPHK1-207ENST00000590959 IGLV5-39A0A0G2JS06 123 aa13.5□□□□□ -0.25
SPHK1-207ENST00000590959 FAM240AA0A1B0GVK7 77 aa13.5□□□□□ -0.25
SPHK1-207ENST00000590959 C11orf45Q8TAV5 145 aa13.48□□□□□ -0.25
SPHK1-207ENST00000590959 A0A096LPF7 62 aa13.48□□□□□ -0.25
SPHK1-207ENST00000590959 RNASE13Q5GAN3 156 aaKnown RBP13.48□□□□□ -0.25
SPHK1-207ENST00000590959 Q6ZTC4 211 aa13.48□□□□□ -0.25
SPHK1-207ENST00000590959 TMEM101Q96IK0 257 aa13.47□□□□□ -0.25
SPHK1-207ENST00000590959 CHCHD5Q9BSY4 110 aa13.47□□□□□ -0.25
SPHK1-207ENST00000590959 HERV-K104P63124 156 aa13.46□□□□□ -0.25
SPHK1-207ENST00000590959 GAGE2BQ13066 116 aa13.46□□□□□ -0.25
SPHK1-207ENST00000590959 GAGE2EQ4V326 116 aa13.46□□□□□ -0.25
SPHK1-207ENST00000590959 GAGE2DQ9UEU5 116 aa13.46□□□□□ -0.25
SPHK1-207ENST00000590959 CDKN2A-AS1Q9UH64 79 aa13.46□□□□□ -0.25
SPHK1-207ENST00000590959 ANAPC13Q9BS18 74 aa13.45□□□□□ -0.26
SPHK1-207ENST00000590959 STAB2Q8WWQ8 2551 aa13.44□□□□□ -0.26
SPHK1-207ENST00000590959 TGP01266 2768 aa13.44□□□□□ -0.26
SPHK1-207ENST00000590959 NANOS2P60321 138 aaKnown RBP13.44□□□□□ -0.26
SPHK1-207ENST00000590959 GAGE6Q13070 117 aa13.44□□□□□ -0.26
SPHK1-207ENST00000590959 H3BNG1 76 aa13.44□□□□□ -0.26
SPHK1-207ENST00000590959 CDC42SE2Q9NRR3 84 aa13.44□□□□□ -0.26
SPHK1-207ENST00000590959 NHLRC4P0CG21 123 aaPredicted RBP13.43□□□□□ -0.26
SPHK1-207ENST00000590959 LINC00308Q8TCZ7 52 aa13.43□□□□□ -0.26
SPHK1-207ENST00000590959 TEX49A0A1B0GTD5 131 aa13.42□□□□□ -0.26
SPHK1-207ENST00000590959 ACYP1P07311 99 aa13.42□□□□□ -0.26
SPHK1-207ENST00000590959 LINC00242Q5T6M2 205 aa13.42□□□□□ -0.26
SPHK1-207ENST00000590959 Q9H8V8 135 aa13.41□□□□□ -0.26
SPHK1-207ENST00000590959 DEFB131BA0A096LNP1 70 aa13.4□□□□□ -0.26
SPHK1-207ENST00000590959 COX7A2LO14548 114 aa13.4□□□□□ -0.26
SPHK1-207ENST00000590959 SMIM1B2RUZ4 78 aa13.38□□□□□ -0.27
SPHK1-207ENST00000590959 TTC32Q5I0X7 151 aa13.38□□□□□ -0.27
SPHK1-207ENST00000590959 IGLV4-60A0A075B6I1 120 aa13.37□□□□□ -0.27
SPHK1-207ENST00000590959 A0A1B0GUV1 79 aa13.37□□□□□ -0.27
SPHK1-207ENST00000590959 C15orf53Q8NAA6 179 aa13.37□□□□□ -0.27
SPHK1-207ENST00000590959 CLEC2BQ92478 149 aa13.37□□□□□ -0.27
SPHK1-207ENST00000590959 TRAV13-1A0A0B4J241 112 aa13.36□□□□□ -0.27
SPHK1-207ENST00000590959 TRACP01848 142 aa13.36□□□□□ -0.27
SPHK1-207ENST00000590959 NPC2P61916 151 aa13.36□□□□□ -0.27
SPHK1-207ENST00000590959 COX6A2Q02221 97 aa13.36□□□□□ -0.27
SPHK1-207ENST00000590959 LELP1Q5T871 98 aa13.36□□□□□ -0.27
SPHK1-207ENST00000590959 ZNF625Q96I27 306 aaPredicted RBP13.36□□□□□ -0.27
SPHK1-207ENST00000590959 NDUFV3P56181 108 aaKnown RBP13.36□□□□□ -0.27
SPHK1-207ENST00000590959 TRAV10A0A0B4J240 114 aa13.35□□□□□ -0.27
SPHK1-207ENST00000590959 MEIG1Q5JSS6 88 aa13.34□□□□□ -0.27
SPHK1-207ENST00000590959 LYPD5Q6UWN5 251 aa13.34□□□□□ -0.27
SPHK1-207ENST00000590959 TRAV13-2A0A0B4J235 113 aa13.31□□□□□ -0.28
SPHK1-207ENST00000590959 IMUPQ9GZP8 106 aa13.31□□□□□ -0.28
SPHK1-207ENST00000590959 DNAH7Q8WXX0 4024 aa13.31□□□□□ -0.28
SPHK1-207ENST00000590959 DAND5Q8N907 189 aa13.31□□□□□ -0.28
SPHK1-207ENST00000590959 TRBV7-7A0A0K0K1E9 115 aa13.3□□□□□ -0.28
SPHK1-207ENST00000590959 IGKV3OR2-268A0A0C4DH90 116 aa13.29□□□□□ -0.28
SPHK1-207ENST00000590959 CSMD3Q7Z407 3707 aa13.29□□□□□ -0.28
SPHK1-207ENST00000590959 SOSTDC1Q6X4U4 206 aa13.27□□□□□ -0.29
SPHK1-207ENST00000590959 LINC00959A0A1B0GUT2 108 aa13.26□□□□□ -0.29
SPHK1-207ENST00000590959 ANGP03950 147 aaKnown RBP13.26□□□□□ -0.29
SPHK1-207ENST00000590959 INAFM2P0DMQ5 153 aa13.26□□□□□ -0.29
SPHK1-207ENST00000590959 RPL28P46779 137 aaKnown RBP13.26□□□□□ -0.29
SPHK1-207ENST00000590959 ESRGQ1W209 222 aa13.25□□□□□ -0.29
SPHK1-207ENST00000590959 LINC00269Q8N2A0 174 aa13.25□□□□□ -0.29
SPHK1-207ENST00000590959 COX7B2Q8TF08 81 aa13.25□□□□□ -0.29
SPHK1-207ENST00000590959 CRPP02741 224 aa13.24□□□□□ -0.29
SPHK1-207ENST00000590959 SS18Q15532 418 aa13.24□□□□□ -0.29
SPHK1-207ENST00000590959 Q8N3U1 123 aa13.24□□□□□ -0.29
SPHK1-207ENST00000590959 CLPSL2Q6UWE3 100 aa13.23□□□□□ -0.29
SPHK1-207ENST00000590959 STARD9Q9P2P6 4700 aa13.22□□□□□ -0.29
SPHK1-207ENST00000590959 REG3AQ06141 175 aa13.21□□□□□ -0.29
SPHK1-207ENST00000590959 LINC00643Q86TS7 51 aa13.21□□□□□ -0.29
SPHK1-207ENST00000590959 IGHV3OR16-9A0A0B4J2B5 98 aa13.21□□□□□ -0.3
SPHK1-207ENST00000590959 BAALC-AS2P0C853 105 aa13.21□□□□□ -0.3
SPHK1-207ENST00000590959 WFDC10BQ8IUB3 73 aa13.21□□□□□ -0.3
SPHK1-207ENST00000590959 IBA57-AS1B1ANH7 110 aa13.2□□□□□ -0.3
SPHK1-207ENST00000590959 H0YGX0 51 aa13.2□□□□□ -0.3
SPHK1-207ENST00000590959 A0A0U1RRA0 63 aa13.19□□□□□ -0.3
SPHK1-207ENST00000590959 XCL1P47992 114 aa13.19□□□□□ -0.3
SPHK1-207ENST00000590959 SDIM1Q6ZPB5 146 aa13.19□□□□□ -0.3
SPHK1-207ENST00000590959 KLK12Q9UKR0 248 aa13.18□□□□□ -0.3
SPHK1-207ENST00000590959 DYNC2H1Q8NCM8 4307 aaKnown RBP13.17□□□□□ -0.3
SPHK1-207ENST00000590959 A0A087WZ39 114 aa13.17□□□□□ -0.3
SPHK1-207ENST00000590959 SND1-IT1Q9HBX3 110 aa13.17□□□□□ -0.3
SPHK1-207ENST00000590959 PRR34Q9NV39 138 aa13.17□□□□□ -0.3
SPHK1-207ENST00000590959 CXCL5P42830 114 aa13.16□□□□□ -0.3
SPHK1-207ENST00000590959 LINC01561Q8N1V8 128 aa13.16□□□□□ -0.3
SPHK1-207ENST00000590959 MIR7-3HGQ8N6C7 128 aa13.16□□□□□ -0.3
SPHK1-207ENST00000590959 CD164L2Q6UWJ8 174 aa13.15□□□□□ -0.3
SPHK1-207ENST00000590959 C5orf38Q86SI9 138 aa13.15□□□□□ -0.3
SPHK1-207ENST00000590959 CHCHD10Q8WYQ3 142 aaPredicted RBP13.15□□□□□ -0.3
SPHK1-207ENST00000590959 PLECQ15149 4684 aaKnown RBP13.15□□□□□ -0.3
SPHK1-207ENST00000590959 B5MCH6 92 aa13.14□□□□□ -0.31
SPHK1-207ENST00000590959 DNAL4O96015 105 aa13.14□□□□□ -0.31
SPHK1-207ENST00000590959 MALP21145 153 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms