RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 CST9LQ9H4G1 147 aa8.87□□□□□ -0.99
SCAMP4-212ENST00000590266 A0A096LNJ9 63 aa8.86□□□□□ -0.99
SCAMP4-212ENST00000590266 HBDP02042 147 aa8.86□□□□□ -0.99
SCAMP4-212ENST00000590266 FAM19A3Q7Z5A8 133 aa8.86□□□□□ -0.99
SCAMP4-212ENST00000590266 MRPL35Q9NZE8 188 aaKnown RBP8.86□□□□□ -0.99
SCAMP4-212ENST00000590266 F8WDY8 70 aa8.85□□□□□ -0.99
SCAMP4-212ENST00000590266 KRTAP10-4P60372 401 aaPredicted RBP8.85□□□□□ -0.99
SCAMP4-212ENST00000590266 CKS1BP61024 79 aa8.85□□□□□ -0.99
SCAMP4-212ENST00000590266 KIAA0087Q14695 138 aa8.85□□□□□ -0.99
SCAMP4-212ENST00000590266 PMVKQ15126 192 aa8.85□□□□□ -0.99
SCAMP4-212ENST00000590266 C6orf226Q5I0X4 101 aa8.85□□□□□ -0.99
SCAMP4-212ENST00000590266 LINC01561Q8N1V8 128 aa8.85□□□□□ -0.99
SCAMP4-212ENST00000590266 C6orf48Q9UBA6 75 aa8.85□□□□□ -0.99
SCAMP4-212ENST00000590266 VPS13BQ7Z7G8 4022 aa8.84□□□□□ -0.99
SCAMP4-212ENST00000590266 TINCRA0A1B0GVN0 87 aa8.84□□□□□ -0.99
SCAMP4-212ENST00000590266 RNF151Q2KHN1 245 aa8.84□□□□□ -0.99
SCAMP4-212ENST00000590266 CHCHD1Q96BP2 118 aaKnown RBP8.84□□□□□ -0.99
SCAMP4-212ENST00000590266 FLG2Q5D862 2391 aaPredicted RBP8.84□□□□□ -0.99
SCAMP4-212ENST00000590266 SERF1AO75920 110 aa8.83□□□□□ -1
SCAMP4-212ENST00000590266 GAGE2EQ4V326 116 aa8.83□□□□□ -1
SCAMP4-212ENST00000590266 GAGE2DQ9UEU5 116 aa8.83□□□□□ -1
SCAMP4-212ENST00000590266 SPINK8P0C7L1 97 aa8.82□□□□□ -1
SCAMP4-212ENST00000590266 LINC00310P59036 64 aa8.82□□□□□ -1
SCAMP4-212ENST00000590266 C9orf116Q5BN46 136 aaPredicted RBP8.82□□□□□ -1
SCAMP4-212ENST00000590266 Q8IZM0 81 aa8.82□□□□□ -1
SCAMP4-212ENST00000590266 MYCBP2O75592 4640 aa8.82□□□□□ -1
SCAMP4-212ENST00000590266 TRBV30A0A0K0K1B3 111 aa8.81□□□□□ -1
SCAMP4-212ENST00000590266 A0A1W2PNN7 141 aa8.81□□□□□ -1
SCAMP4-212ENST00000590266 SMIM1B2RUZ4 78 aa8.81□□□□□ -1
SCAMP4-212ENST00000590266 HSBP1O75506 76 aa8.81□□□□□ -1
SCAMP4-212ENST00000590266 HNRNPA3P51991 378 aaKnown RBP8.81□□□□□ -1
SCAMP4-212ENST00000590266 PDZD11Q5EBL8 140 aa8.81□□□□□ -1
SCAMP4-212ENST00000590266 COA6Q5JTJ3 125 aaKnown RBP8.81□□□□□ -1
SCAMP4-212ENST00000590266 Q6ZRP5 223 aa8.81□□□□□ -1
SCAMP4-212ENST00000590266 NUPR1O60356 82 aa8.8□□□□□ -1
SCAMP4-212ENST00000590266 ATP5LO75964 103 aa8.8□□□□□ -1
SCAMP4-212ENST00000590266 FAM19A5Q7Z5A7 132 aaPredicted RBP8.79□□□□□ -1
SCAMP4-212ENST00000590266 COX7B2Q8TF08 81 aa8.79□□□□□ -1
SCAMP4-212ENST00000590266 IGLV5-45A0A087WSX0 123 aa8.78□□□□□ -1
SCAMP4-212ENST00000590266 FAM168BA1KXE4 195 aa8.78□□□□□ -1
SCAMP4-212ENST00000590266 H3BRM9 83 aa8.78□□□□□ -1
SCAMP4-212ENST00000590266 S100A6P06703 90 aa8.78□□□□□ -1
SCAMP4-212ENST00000590266 TLX1NBP0CAT3 122 aa8.78□□□□□ -1
SCAMP4-212ENST00000590266 IGLC3P0DOY3 106 aa8.78□□□□□ -1
SCAMP4-212ENST00000590266 FAM19A2Q8N3H0 131 aa8.78□□□□□ -1
SCAMP4-212ENST00000590266 NDUFC2-KCTD14E9PQ53 114 aa8.77□□□□□ -1.01
SCAMP4-212ENST00000590266 F8VRH5 84 aa8.77□□□□□ -1.01
SCAMP4-212ENST00000590266 PRR3P79522 188 aaKnown RBP8.77□□□□□ -1.01
SCAMP4-212ENST00000590266 PHF5AQ7RTV0 110 aaKnown RBP8.77□□□□□ -1.01
SCAMP4-212ENST00000590266 TMA7Q9Y2S6 64 aaKnown RBP8.77□□□□□ -1.01
SCAMP4-212ENST00000590266 CXCL5P42830 114 aa8.76□□□□□ -1.01
SCAMP4-212ENST00000590266 IFI27L1Q96BM0 104 aa8.76□□□□□ -1.01
SCAMP4-212ENST00000590266 KRTAP29-1A8MX34 341 aaPredicted RBP8.75□□□□□ -1.01
SCAMP4-212ENST00000590266 H0Y8G0 127 aa8.75□□□□□ -1.01
SCAMP4-212ENST00000590266 ZNF22P17026 224 aaPredicted RBP8.75□□□□□ -1.01
SCAMP4-212ENST00000590266 TMEM170BQ5T4T1 132 aa8.75□□□□□ -1.01
SCAMP4-212ENST00000590266 CHTOPQ9Y3Y2 248 aaKnown RBP8.75□□□□□ -1.01
SCAMP4-212ENST00000590266 C11orf86A6NJI1 115 aa8.74□□□□□ -1.01
SCAMP4-212ENST00000590266 SNRPEP62304 92 aaKnown RBP8.74□□□□□ -1.01
SCAMP4-212ENST00000590266 XAGE1AQ9HD64 81 aa8.74□□□□□ -1.01
SCAMP4-212ENST00000590266 C9orf129Q5T035 196 aaKnown RBP8.73□□□□□ -1.01
SCAMP4-212ENST00000590266 C5orf52A6NGY3 159 aa8.72□□□□□ -1.01
SCAMP4-212ENST00000590266 M0QXV9 152 aa8.72□□□□□ -1.01
SCAMP4-212ENST00000590266 LEPROTL1O95214 131 aa8.72□□□□□ -1.01
SCAMP4-212ENST00000590266 FABP4P15090 132 aa8.72□□□□□ -1.01
SCAMP4-212ENST00000590266 HIST3H2BBQ8N257 126 aa8.72□□□□□ -1.01
SCAMP4-212ENST00000590266 HSPB8Q9UJY1 196 aa8.71□□□□□ -1.02
SCAMP4-212ENST00000590266 TRAV12-1A0A0B4J245 112 aa8.7□□□□□ -1.02
SCAMP4-212ENST00000590266 IGLV5-39A0A0G2JS06 123 aa8.7□□□□□ -1.02
SCAMP4-212ENST00000590266 S100A2P29034 98 aa8.7□□□□□ -1.02
SCAMP4-212ENST00000590266 UBE2BP63146 152 aa8.7□□□□□ -1.02
SCAMP4-212ENST00000590266 PSORS1C2Q9UIG4 136 aa8.7□□□□□ -1.02
SCAMP4-212ENST00000590266 OXTP01178 125 aa8.69□□□□□ -1.02
SCAMP4-212ENST00000590266 PFN2P35080 140 aa8.69□□□□□ -1.02
SCAMP4-212ENST00000590266 C1orf137Q5JT78 98 aa8.69□□□□□ -1.02
SCAMP4-212ENST00000590266 KRTAP7-1Q8IUC3 87 aa8.69□□□□□ -1.02
SCAMP4-212ENST00000590266 ZNF625Q96I27 306 aaPredicted RBP8.69□□□□□ -1.02
SCAMP4-212ENST00000590266 SERTAD4-AS1Q5TG53 156 aa8.68□□□□□ -1.02
SCAMP4-212ENST00000590266 HIST1H2BLQ99880 126 aa8.68□□□□□ -1.02
SCAMP4-212ENST00000590266 KRTAP11-1Q8IUC1 163 aa8.66□□□□□ -1.02
SCAMP4-212ENST00000590266 MAP1LC3CQ9BXW4 147 aa8.66□□□□□ -1.02
SCAMP4-212ENST00000590266 TMEM223A0PJW6 202 aa8.65□□□□□ -1.02
SCAMP4-212ENST00000590266 ODF1Q14990 250 aa8.65□□□□□ -1.02
SCAMP4-212ENST00000590266 C22orf24Q9Y442 160 aa8.65□□□□□ -1.02
SCAMP4-212ENST00000590266 SPINK6Q6UWN8 80 aa8.64□□□□□ -1.03
SCAMP4-212ENST00000590266 PMCHL2Q9BQD1 86 aa8.64□□□□□ -1.03
SCAMP4-212ENST00000590266 ERG28Q9UKR5 140 aa8.64□□□□□ -1.03
SCAMP4-212ENST00000590266 SYS1-DBNDD2H3BUS1 97 aa8.63□□□□□ -1.03
SCAMP4-212ENST00000590266 C3orf79P0CE67 100 aa8.63□□□□□ -1.03
SCAMP4-212ENST00000590266 KRTDAPP60985 99 aa8.63□□□□□ -1.03
SCAMP4-212ENST00000590266 A0A0U1RRA0 63 aa8.62□□□□□ -1.03
SCAMP4-212ENST00000590266 GAGE10A6NGK3 116 aa8.62□□□□□ -1.03
SCAMP4-212ENST00000590266 LBHQ53QV2 105 aaPredicted RBP8.62□□□□□ -1.03
SCAMP4-212ENST00000590266 IGLV7-43P04211 117 aa8.61□□□□□ -1.03
SCAMP4-212ENST00000590266 LINC00158P58513 81 aa8.61□□□□□ -1.03
SCAMP4-212ENST00000590266 SRSF9Q13242 221 aaKnown RBP eCLIP8.61□□□□□ -1.03
SCAMP4-212ENST00000590266 SFTA2Q6UW10 78 aa8.61□□□□□ -1.03
SCAMP4-212ENST00000590266 REG3GQ6UW15 175 aa8.61□□□□□ -1.03
SCAMP4-212ENST00000590266 PET117Q6UWS5 81 aa8.61□□□□□ -1.03
SCAMP4-212ENST00000590266 MRPL55Q7Z7F7 128 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms