RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 TRBV30A0A0K0K1B3 111 aa11.17□□□□□ -0.62
CIRBP-227ENST00000590188 SEC11AP67812 179 aa11.17□□□□□ -0.62
CIRBP-227ENST00000590188 C6orf226Q5I0X4 101 aa11.17□□□□□ -0.62
CIRBP-227ENST00000590188 CKS1BP61024 79 aa11.16□□□□□ -0.62
CIRBP-227ENST00000590188 Q8IZM0 81 aa11.15□□□□□ -0.62
CIRBP-227ENST00000590188 C18orf32Q8TCD1 76 aa11.15□□□□□ -0.62
CIRBP-227ENST00000590188 URB1-AS1Q96HZ7 61 aa11.15□□□□□ -0.62
CIRBP-227ENST00000590188 MT1HL1P0DM35 61 aa11.14□□□□□ -0.63
CIRBP-227ENST00000590188 PMCHL1Q16048 86 aa11.14□□□□□ -0.63
CIRBP-227ENST00000590188 CST9LQ9H4G1 147 aa11.14□□□□□ -0.63
CIRBP-227ENST00000590188 PSORS1C2Q9UIG4 136 aa11.14□□□□□ -0.63
CIRBP-227ENST00000590188 TINCRA0A1B0GVN0 87 aa11.13□□□□□ -0.63
CIRBP-227ENST00000590188 LINC01549A6NIU2 74 aa11.13□□□□□ -0.63
CIRBP-227ENST00000590188 NDUFC2-KCTD14E9PQ53 114 aa11.13□□□□□ -0.63
CIRBP-227ENST00000590188 PMVKQ15126 192 aa11.13□□□□□ -0.63
CIRBP-227ENST00000590188 HMCN2Q8NDA2 5059 aa11.12□□□□□ -0.63
CIRBP-227ENST00000590188 A0A096LNJ9 63 aa11.12□□□□□ -0.63
CIRBP-227ENST00000590188 SMIM1B2RUZ4 78 aa11.12□□□□□ -0.63
CIRBP-227ENST00000590188 SPINK8P0C7L1 97 aa11.12□□□□□ -0.63
CIRBP-227ENST00000590188 LINC00614P0C842 121 aa11.12□□□□□ -0.63
CIRBP-227ENST00000590188 NDUFA6P56556 154 aa11.12□□□□□ -0.63
CIRBP-227ENST00000590188 C1orf137Q5JT78 98 aa11.12□□□□□ -0.63
CIRBP-227ENST00000590188 C9orf129Q5T035 196 aaKnown RBP11.12□□□□□ -0.63
CIRBP-227ENST00000590188 TNXBP22105 4242 aa11.11□□□□□ -0.63
CIRBP-227ENST00000590188 SPINK6Q6UWN8 80 aa11.11□□□□□ -0.63
CIRBP-227ENST00000590188 KRTAP7-1Q8IUC3 87 aa11.11□□□□□ -0.63
CIRBP-227ENST00000590188 KRTAP11-1Q8IUC1 163 aa11.1□□□□□ -0.63
CIRBP-227ENST00000590188 M0QXV9 152 aa11.09□□□□□ -0.63
CIRBP-227ENST00000590188 HBDP02042 147 aa11.09□□□□□ -0.63
CIRBP-227ENST00000590188 SRSF9Q13242 221 aaKnown RBP eCLIP11.09□□□□□ -0.633e-7■■□□□ 13.7
CIRBP-227ENST00000590188 COX7B2Q8TF08 81 aa11.09□□□□□ -0.63
CIRBP-227ENST00000590188 IGLV5-45A0A087WSX0 123 aa11.08□□□□□ -0.64
CIRBP-227ENST00000590188 F8VRH5 84 aa11.08□□□□□ -0.64
CIRBP-227ENST00000590188 PDZD11Q5EBL8 140 aa11.08□□□□□ -0.64
CIRBP-227ENST00000590188 SERTAD4-AS1Q5TG53 156 aa11.08□□□□□ -0.64
CIRBP-227ENST00000590188 CBLN2Q8IUK8 224 aa11.08□□□□□ -0.64
CIRBP-227ENST00000590188 YPEL4Q96NS1 127 aa11.08□□□□□ -0.64
CIRBP-227ENST00000590188 XAGE1AQ9HD64 81 aa11.08□□□□□ -0.64
CIRBP-227ENST00000590188 UBE2BP63146 152 aa11.07□□□□□ -0.64
CIRBP-227ENST00000590188 CXCL5P42830 114 aa11.06□□□□□ -0.64
CIRBP-227ENST00000590188 REG3GQ6UW15 175 aa11.06□□□□□ -0.64
CIRBP-227ENST00000590188 RAB5BP61020 215 aa11.05□□□□□ -0.64
CIRBP-227ENST00000590188 ODF1Q14990 250 aa11.05□□□□□ -0.64
CIRBP-227ENST00000590188 LINC01600Q96MT4 127 aa11.05□□□□□ -0.64
CIRBP-227ENST00000590188 H3BRM9 83 aa11.04□□□□□ -0.64
CIRBP-227ENST00000590188 IGLC3P0DOY3 106 aa11.04□□□□□ -0.64
CIRBP-227ENST00000590188 ZNF22P17026 224 aaPredicted RBP11.03□□□□□ -0.64
CIRBP-227ENST00000590188 PLA2G2DQ9UNK4 145 aa11.03□□□□□ -0.64
CIRBP-227ENST00000590188 IGLV7-43P04211 117 aa11.02□□□□□ -0.65
CIRBP-227ENST00000590188 BAGE3Q86Y29 109 aa11.02□□□□□ -0.65
CIRBP-227ENST00000590188 ATP5LO75964 103 aa11.01□□□□□ -0.65
CIRBP-227ENST00000590188 C22orf24Q9Y442 160 aa11.01□□□□□ -0.65
CIRBP-227ENST00000590188 C11orf86A6NJI1 115 aa10.99□□□□□ -0.65
CIRBP-227ENST00000590188 TMEM170BQ5T4T1 132 aa10.98□□□□□ -0.65
CIRBP-227ENST00000590188 IGLV5-39A0A0G2JS06 123 aa10.97□□□□□ -0.65
CIRBP-227ENST00000590188 CHCHD1Q96BP2 118 aaKnown RBP10.97□□□□□ -0.65
CIRBP-227ENST00000590188 CHTOPQ9Y3Y2 248 aaKnown RBP10.97□□□□□ -0.65
CIRBP-227ENST00000590188 TRGC2P03986 189 aa10.96□□□□□ -0.65
CIRBP-227ENST00000590188 PFN2P35080 140 aa10.96□□□□□ -0.65
CIRBP-227ENST00000590188 FAM19A2Q8N3H0 131 aa10.96□□□□□ -0.65
CIRBP-227ENST00000590188 KRTAP10-8P60410 259 aa10.95□□□□□ -0.66
CIRBP-227ENST00000590188 DIRC1Q969H9 104 aa10.95□□□□□ -0.66
CIRBP-227ENST00000590188 IFI27L1Q96BM0 104 aa10.95□□□□□ -0.66
CIRBP-227ENST00000590188 ZNF625Q96I27 306 aaPredicted RBP10.95□□□□□ -0.66
CIRBP-227ENST00000590188 HSBP1O75506 76 aa10.94□□□□□ -0.66
CIRBP-227ENST00000590188 LBHQ53QV2 105 aaPredicted RBP10.94□□□□□ -0.66
CIRBP-227ENST00000590188 GAGE10A6NGK3 116 aa10.93□□□□□ -0.66
CIRBP-227ENST00000590188 H0Y9J4 135 aa10.93□□□□□ -0.66
CIRBP-227ENST00000590188 MRPL55Q7Z7F7 128 aaKnown RBP10.93□□□□□ -0.66
CIRBP-227ENST00000590188 RPL37AP8A6NKH3 93 aa10.92□□□□□ -0.66
CIRBP-227ENST00000590188 H0Y8G0 127 aa10.92□□□□□ -0.66
CIRBP-227ENST00000590188 ATP6V1G1O75348 118 aa10.92□□□□□ -0.66
CIRBP-227ENST00000590188 LINC00167Q96N53 147 aa10.91□□□□□ -0.66
CIRBP-227ENST00000590188 ERG28Q9UKR5 140 aa10.91□□□□□ -0.66
CIRBP-227ENST00000590188 TRAV12-1A0A0B4J245 112 aa10.9□□□□□ -0.66
CIRBP-227ENST00000590188 SCO1O75880 301 aa10.9□□□□□ -0.66
CIRBP-227ENST00000590188 PRR26Q8N8Z3 221 aa10.9□□□□□ -0.66
CIRBP-227ENST00000590188 TP73-AS1Q9UF72 201 aa10.9□□□□□ -0.66
CIRBP-227ENST00000590188 SERF1AO75920 110 aa10.89□□□□□ -0.67
CIRBP-227ENST00000590188 NKAPP1Q8N9T2 125 aa10.89□□□□□ -0.67
CIRBP-227ENST00000590188 TMEM223A0PJW6 202 aa10.88□□□□□ -0.67
CIRBP-227ENST00000590188 NUPR1O60356 82 aa10.88□□□□□ -0.67
CIRBP-227ENST00000590188 LINC00310P59036 64 aa10.88□□□□□ -0.67
CIRBP-227ENST00000590188 UBR4Q5T4S7 5183 aa10.88□□□□□ -0.67
CIRBP-227ENST00000590188 SND1-IT1Q9HBX3 110 aa10.87□□□□□ -0.67
CIRBP-227ENST00000590188 A0A0U1RRA0 63 aa10.86□□□□□ -0.67
CIRBP-227ENST00000590188 COLCA2A8K830 154 aa10.86□□□□□ -0.67
CIRBP-227ENST00000590188 ZNF861PO60384 105 aa10.86□□□□□ -0.67
CIRBP-227ENST00000590188 IGLV5-37A0A075B6J1 123 aa10.85□□□□□ -0.67
CIRBP-227ENST00000590188 LEPROTL1O95214 131 aa10.85□□□□□ -0.67
CIRBP-227ENST00000590188 IGKV2-28A0A075B6P5 120 aa10.84□□□□□ -0.67
CIRBP-227ENST00000590188 BCE1O60756 84 aa10.84□□□□□ -0.67
CIRBP-227ENST00000590188 IGKV2D-28P01615 120 aa10.84□□□□□ -0.67
CIRBP-227ENST00000590188 KRTAP1-4P0C5Y4 121 aa10.84□□□□□ -0.67
CIRBP-227ENST00000590188 FABP4P15090 132 aa10.83□□□□□ -0.68
CIRBP-227ENST00000590188 LINC00158P58513 81 aa10.83□□□□□ -0.68
CIRBP-227ENST00000590188 VPREB1P12018 145 aa10.82□□□□□ -0.68
CIRBP-227ENST00000590188 S100A1P23297 94 aa10.82□□□□□ -0.68
CIRBP-227ENST00000590188 COX17Q14061 63 aa10.82□□□□□ -0.68
CIRBP-227ENST00000590188 Q8NDZ9 215 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 202.3 ms