RNA–Protein interactions for RNA: ENST00000589235.5

CIRBP-222, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CIRBP, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-222ENST00000589235 DIRC1Q969H9 104 aa13.05□□□□□ -0.32
CIRBP-222ENST00000589235 TRAV9-1A0A075B6T8 112 aa13.04□□□□□ -0.32
CIRBP-222ENST00000589235 FAM168BA1KXE4 195 aa13.04□□□□□ -0.32
CIRBP-222ENST00000589235 IGLV7-43P04211 117 aa13.04□□□□□ -0.32
CIRBP-222ENST00000589235 HERVK_113P63121 156 aa13.04□□□□□ -0.32
CIRBP-222ENST00000589235 C2orf82Q6UX34 121 aa13.04□□□□□ -0.32
CIRBP-222ENST00000589235 FAM19A3Q7Z5A8 133 aa13.04□□□□□ -0.32
CIRBP-222ENST00000589235 TOMM7Q9P0U1 55 aa13.04□□□□□ -0.32
CIRBP-222ENST00000589235 UBE2BP63146 152 aa13.03□□□□□ -0.32
CIRBP-222ENST00000589235 LINC00173Q6ZV60 143 aa13.03□□□□□ -0.32
CIRBP-222ENST00000589235 TIMM17AQ99595 171 aa13.03□□□□□ -0.32
CIRBP-222ENST00000589235 GEMIN7Q9H840 131 aaKnown RBP13.03□□□□□ -0.32
CIRBP-222ENST00000589235 ZC2HC1BQ5TFG8 222 aa13.02□□□□□ -0.33
CIRBP-222ENST00000589235 ALKBH7Q9BT30 221 aaPredicted RBP13.02□□□□□ -0.33
CIRBP-222ENST00000589235 LINC01549A6NIU2 74 aa13.01□□□□□ -0.33
CIRBP-222ENST00000589235 M0QXV9 152 aa13.01□□□□□ -0.33
CIRBP-222ENST00000589235 S100A6P06703 90 aa13.01□□□□□ -0.33
CIRBP-222ENST00000589235 Q8IZM0 81 aa13.01□□□□□ -0.33
CIRBP-222ENST00000589235 TOMM6Q96B49 74 aa13.01□□□□□ -0.33
CIRBP-222ENST00000589235 C5orf52A6NGY3 159 aa13□□□□□ -0.33
CIRBP-222ENST00000589235 KIAA1644Q3SXP7 199 aa12.99□□□□□ -0.33
CIRBP-222ENST00000589235 ERASQ7Z444 233 aa12.99□□□□□ -0.33
CIRBP-222ENST00000589235 UBR4Q5T4S7 5183 aa12.98□□□□□ -0.33
CIRBP-222ENST00000589235 SCGB3A1Q96QR1 104 aa12.98□□□□□ -0.33
CIRBP-222ENST00000589235 COX19Q49B96 90 aa12.97□□□□□ -0.33
CIRBP-222ENST00000589235 GNB1LQ9BYB4 327 aa12.97□□□□□ -0.33
CIRBP-222ENST00000589235 CXCL5P42830 114 aa12.96□□□□□ -0.33
CIRBP-222ENST00000589235 C9orf129Q5T035 196 aaKnown RBP12.96□□□□□ -0.33
CIRBP-222ENST00000589235 CDKN2A-AS1Q9UH64 79 aa12.96□□□□□ -0.33
CIRBP-222ENST00000589235 TNXBP22105 4242 aa12.95□□□□□ -0.34
CIRBP-222ENST00000589235 H0Y9J4 135 aa12.95□□□□□ -0.34
CIRBP-222ENST00000589235 TRGC2P03986 189 aa12.95□□□□□ -0.34
CIRBP-222ENST00000589235 SNRPEP62304 92 aaKnown RBP12.95□□□□□ -0.34
CIRBP-222ENST00000589235 F8VRH5 84 aa12.94□□□□□ -0.34
CIRBP-222ENST00000589235 ODF1Q14990 250 aa12.94□□□□□ -0.34
CIRBP-222ENST00000589235 LBHQ53QV2 105 aaPredicted RBP12.94□□□□□ -0.34
CIRBP-222ENST00000589235 KRTAP11-1Q8IUC1 163 aa12.93□□□□□ -0.34
CIRBP-222ENST00000589235 KRTAP7-1Q8IUC3 87 aa12.93□□□□□ -0.34
CIRBP-222ENST00000589235 LINC00469Q8N7U9 141 aa12.93□□□□□ -0.34
CIRBP-222ENST00000589235 TINCRA0A1B0GVN0 87 aa12.91□□□□□ -0.34
CIRBP-222ENST00000589235 HIST1H2BKO60814 126 aa12.91□□□□□ -0.34
CIRBP-222ENST00000589235 HIST1H2BJP06899 126 aa12.91□□□□□ -0.34
CIRBP-222ENST00000589235 HIST1H2BOP23527 126 aa12.91□□□□□ -0.34
CIRBP-222ENST00000589235 HIST1H2BBP33778 126 aa12.91□□□□□ -0.34
CIRBP-222ENST00000589235 HIST1H2BDP58876 126 aa12.91□□□□□ -0.34
CIRBP-222ENST00000589235 HIST1H2BCP62807 126 aa12.91□□□□□ -0.34
CIRBP-222ENST00000589235 HIST2H2BEQ16778 126 aa12.91□□□□□ -0.34
CIRBP-222ENST00000589235 PDZD11Q5EBL8 140 aa12.91□□□□□ -0.34
CIRBP-222ENST00000589235 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.91□□□□□ -0.34
CIRBP-222ENST00000589235 HIST1H2BHQ93079 126 aa12.91□□□□□ -0.34
CIRBP-222ENST00000589235 HIST1H2BNQ99877 126 aa12.91□□□□□ -0.34
CIRBP-222ENST00000589235 HIST1H2BMQ99879 126 aa12.91□□□□□ -0.34
CIRBP-222ENST00000589235 FABP9Q0Z7S8 132 aa12.9□□□□□ -0.34
CIRBP-222ENST00000589235 FA2HQ7L5A8 372 aa12.9□□□□□ -0.34
CIRBP-222ENST00000589235 IGLV1-50A0A075B6I6 118 aa12.89□□□□□ -0.35
CIRBP-222ENST00000589235 LINC01546A6NGU7 62 aa12.89□□□□□ -0.35
CIRBP-222ENST00000589235 NUPR1O60356 82 aa12.89□□□□□ -0.35
CIRBP-222ENST00000589235 NDUFA6P56556 154 aa12.89□□□□□ -0.35
CIRBP-222ENST00000589235 C22orf24Q9Y442 160 aa12.89□□□□□ -0.35
CIRBP-222ENST00000589235 PRR26Q8N8Z3 221 aa12.88□□□□□ -0.35
CIRBP-222ENST00000589235 COX7B2Q8TF08 81 aa12.88□□□□□ -0.35
CIRBP-222ENST00000589235 XAGE1AQ9HD64 81 aa12.88□□□□□ -0.35
CIRBP-222ENST00000589235 PMVKQ15126 192 aa12.87□□□□□ -0.35
CIRBP-222ENST00000589235 COA6Q5JTJ3 125 aaKnown RBP12.87□□□□□ -0.35
CIRBP-222ENST00000589235 LINC00518Q8N0U6 118 aa12.87□□□□□ -0.35
CIRBP-222ENST00000589235 MRPL18Q9H0U6 180 aaKnown RBP12.87□□□□□ -0.35
CIRBP-222ENST00000589235 CST9LQ9H4G1 147 aa12.87□□□□□ -0.35
CIRBP-222ENST00000589235 SMIM1B2RUZ4 78 aa12.86□□□□□ -0.35
CIRBP-222ENST00000589235 AKR1D1P51857 326 aa12.86□□□□□ -0.35
CIRBP-222ENST00000589235 TRAPPC1Q9Y5R8 145 aa12.86□□□□□ -0.35
CIRBP-222ENST00000589235 IGLV5-45A0A087WSX0 123 aa12.85□□□□□ -0.35
CIRBP-222ENST00000589235 H3BRM9 83 aa12.85□□□□□ -0.35
CIRBP-222ENST00000589235 TP73-AS1Q9UF72 201 aa12.85□□□□□ -0.35
CIRBP-222ENST00000589235 ZNF861PO60384 105 aa12.84□□□□□ -0.35
CIRBP-222ENST00000589235 RPL13AP40429 203 aaKnown RBP12.84□□□□□ -0.35
CIRBP-222ENST00000589235 MRPL55Q7Z7F7 128 aaKnown RBP12.83□□□□□ -0.36
CIRBP-222ENST00000589235 SPINK8P0C7L1 97 aa12.8□□□□□ -0.36
CIRBP-222ENST00000589235 SMIM6P0DI80 62 aa12.8□□□□□ -0.36
CIRBP-222ENST00000589235 HIST3H2BBQ8N257 126 aa12.8□□□□□ -0.36
CIRBP-222ENST00000589235 ATP5LO75964 103 aa12.79□□□□□ -0.36
CIRBP-222ENST00000589235 KRTAP1-4P0C5Y4 121 aa12.79□□□□□ -0.36
CIRBP-222ENST00000589235 S100A2P29034 98 aa12.79□□□□□ -0.36
CIRBP-222ENST00000589235 RPL28P46779 137 aaKnown RBP12.78□□□□□ -0.36
CIRBP-222ENST00000589235 BCE1O60756 84 aa12.76□□□□□ -0.37
CIRBP-222ENST00000589235 LINC00614P0C842 121 aa12.76□□□□□ -0.37
CIRBP-222ENST00000589235 NKAPP1Q8N9T2 125 aa12.76□□□□□ -0.37
CIRBP-222ENST00000589235 LRP2P98164 4655 aa12.76□□□□□ -0.37
CIRBP-222ENST00000589235 IGLC3P0DOY3 106 aa12.75□□□□□ -0.37
CIRBP-222ENST00000589235 LINC00167Q96N53 147 aa12.75□□□□□ -0.37
CIRBP-222ENST00000589235 C12orf57Q99622 126 aa12.75□□□□□ -0.37
CIRBP-222ENST00000589235 HBDP02042 147 aa12.73□□□□□ -0.37
CIRBP-222ENST00000589235 IGLV5-37A0A075B6J1 123 aa12.72□□□□□ -0.37
CIRBP-222ENST00000589235 RPL37AP8A6NKH3 93 aa12.72□□□□□ -0.37
CIRBP-222ENST00000589235 C18orf32Q8TCD1 76 aa12.71□□□□□ -0.37
CIRBP-222ENST00000589235 HIST1H2BLQ99880 126 aa12.71□□□□□ -0.37
CIRBP-222ENST00000589235 GAGE10A6NGK3 116 aa12.7□□□□□ -0.38
CIRBP-222ENST00000589235 IGLV5-39A0A0G2JS06 123 aa12.69□□□□□ -0.38
CIRBP-222ENST00000589235 PFN2P35080 140 aa12.69□□□□□ -0.38
CIRBP-222ENST00000589235 SFTA2Q6UW10 78 aa12.69□□□□□ -0.38
CIRBP-222ENST00000589235 A0A096LNJ9 63 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms