RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 ASXL1Q8IXJ9 1541 aa0.08□□□□□ -2.4
SMAD4-207ENST00000589076 DOCK1Q14185 1865 aa0.08□□□□□ -2.4
SMAD4-207ENST00000589076 SPTSSBQ8NFR3 76 aa0.08□□□□□ -2.4
SMAD4-207ENST00000589076 SPRR2FQ96RM1 72 aa0.08□□□□□ -2.4
SMAD4-207ENST00000589076 SDF2Q99470 211 aa0.08□□□□□ -2.4
SMAD4-207ENST00000589076 CCDC167Q9P0B6 97 aa0.08□□□□□ -2.4
SMAD4-207ENST00000589076 FOCADQ5VW36 1801 aa0.08□□□□□ -2.4
SMAD4-207ENST00000589076 NRXN3Q9Y4C0 1643 aa0.07□□□□□ -2.4
SMAD4-207ENST00000589076 TRAV1-2A0A0B4J238 106 aa0.07□□□□□ -2.4
SMAD4-207ENST00000589076 Q5VSD8 79 aa0.07□□□□□ -2.4
SMAD4-207ENST00000589076 PLXNB2O15031 1838 aa0.07□□□□□ -2.4
SMAD4-207ENST00000589076 URB1O60287 2271 aaKnown RBP0.07□□□□□ -2.4
SMAD4-207ENST00000589076 KDM3BQ7LBC6 1761 aa0.06□□□□□ -2.4
SMAD4-207ENST00000589076 ABCC5O15440 1437 aa0.06□□□□□ -2.4
SMAD4-207ENST00000589076 CASKIN1Q8WXD9 1431 aa0.06□□□□□ -2.4
SMAD4-207ENST00000589076 IFT140Q96RY7 1462 aa0.06□□□□□ -2.4
SMAD4-207ENST00000589076 SMIM6P0DI80 62 aa0.06□□□□□ -2.4
SMAD4-207ENST00000589076 CCL8P80075 99 aa0.06□□□□□ -2.4
SMAD4-207ENST00000589076 S100A7L2Q5SY68 101 aa0.06□□□□□ -2.4
SMAD4-207ENST00000589076 UBE2DNLQ8IWF7 75 aa0.06□□□□□ -2.4
SMAD4-207ENST00000589076 TARBP1Q13395 1621 aaKnown RBP0.05□□□□□ -2.4
SMAD4-207ENST00000589076 FAM92AA1XBS5 289 aa0.05□□□□□ -2.4
SMAD4-207ENST00000589076 G3V318 75 aa0.05□□□□□ -2.4
SMAD4-207ENST00000589076 IFITM1P13164 125 aa0.05□□□□□ -2.4
SMAD4-207ENST00000589076 Q5VV11 94 aa0.05□□□□□ -2.4
SMAD4-207ENST00000589076 SEC11CQ9BY50 192 aa0.05□□□□□ -2.4
SMAD4-207ENST00000589076 PI4KAP42356 2102 aa0.05□□□□□ -2.4
SMAD4-207ENST00000589076 VPS13DQ5THJ4 4388 aa0.04□□□□□ -2.4
SMAD4-207ENST00000589076 GAPVD1Q14C86 1478 aa0.04□□□□□ -2.4
SMAD4-207ENST00000589076 DNAH2Q9P225 4427 aa0.04□□□□□ -2.4
SMAD4-207ENST00000589076 ARPC4P59998 168 aa0.04□□□□□ -2.4
SMAD4-207ENST00000589076 BAGE3Q86Y29 109 aa0.04□□□□□ -2.4
SMAD4-207ENST00000589076 COPS9Q8WXC6 57 aa0.04□□□□□ -2.4
SMAD4-207ENST00000589076 DPH3Q96FX2 82 aa0.04□□□□□ -2.4
SMAD4-207ENST00000589076 LINC00312Q9Y6C7 94 aa0.04□□□□□ -2.4
SMAD4-207ENST00000589076 U3KQA8 63 aa0.04□□□□□ -2.4
SMAD4-207ENST00000589076 CFTRP13569 1480 aa0.03□□□□□ -2.4
SMAD4-207ENST00000589076 DNMBPQ6XZF7 1577 aa0.03□□□□□ -2.4
SMAD4-207ENST00000589076 SHPRHQ149N8 1683 aa0.03□□□□□ -2.4
SMAD4-207ENST00000589076 PIN1P1O15428 100 aa0.03□□□□□ -2.4
SMAD4-207ENST00000589076 ARAP2Q8WZ64 1704 aa0.03□□□□□ -2.4
SMAD4-207ENST00000589076 TCHHQ07283 1943 aa0.03□□□□□ -2.41
SMAD4-207ENST00000589076 ERVK-7P63135 1459 aa0.03□□□□□ -2.41
SMAD4-207ENST00000589076 C1orf167Q5SNV9 1468 aa0.03□□□□□ -2.41
SMAD4-207ENST00000589076 PIGBOS1A0A0B4J2F0 54 aa0.02□□□□□ -2.41
SMAD4-207ENST00000589076 ZNF815PA8K554 130 aa0.02□□□□□ -2.41
SMAD4-207ENST00000589076 SSBP3-AS1Q7Z2R9 100 aa0.02□□□□□ -2.41
SMAD4-207ENST00000589076 PDCD10Q9BUL8 212 aa0.02□□□□□ -2.41
SMAD4-207ENST00000589076 SPAARA0A1B0GVQ0 90 aa0.01□□□□□ -2.41
SMAD4-207ENST00000589076 SIX6O95475 246 aa0.01□□□□□ -2.41
SMAD4-207ENST00000589076 CCL18P55774 89 aa0.01□□□□□ -2.41
SMAD4-207ENST00000589076 C12orf73Q69YU5 71 aa0.01□□□□□ -2.41
SMAD4-207ENST00000589076 CNFNQ9BYD5 112 aa0.01□□□□□ -2.41
SMAD4-207ENST00000589076 MLH3Q9UHC1 1453 aa0.01□□□□□ -2.41
SMAD4-207ENST00000589076 DNAH11Q96DT5 4516 aa0.01□□□□□ -2.41
SMAD4-207ENST00000589076 ADCY10Q96PN6 1610 aa0.01□□□□□ -2.41
SMAD4-207ENST00000589076 TRAV13-2A0A0B4J235 113 aa0□□□□□ -2.41
SMAD4-207ENST00000589076 SPINK8P0C7L1 97 aa0□□□□□ -2.41
SMAD4-207ENST00000589076 S100A12P80511 92 aa0□□□□□ -2.41
SMAD4-207ENST00000589076 CFAP126Q5VTH2 177 aa0□□□□□ -2.41
SMAD4-207ENST00000589076 SMG6Q86US8 1419 aaKnown RBP0□□□□□ -2.41
SMAD4-207ENST00000589076 ARL11Q969Q4 196 aa0□□□□□ -2.41
SMAD4-207ENST00000589076 ROBO1Q9Y6N7 1651 aa0□□□□□ -2.41
SMAD4-207ENST00000589076 SBF2Q86WG5 1849 aa-0.01□□□□□ -2.41
SMAD4-207ENST00000589076 A0A0D9SFI3 127 aa-0.01□□□□□ -2.41
SMAD4-207ENST00000589076 HIST1H1DP16402 221 aaKnown RBP-0.01□□□□□ -2.41
SMAD4-207ENST00000589076 SELENOWP63302 87 aa-0.01□□□□□ -2.41
SMAD4-207ENST00000589076 CCDC58Q4VC31 144 aa-0.01□□□□□ -2.41
SMAD4-207ENST00000589076 AQP10Q96PS8 301 aa-0.01□□□□□ -2.41
SMAD4-207ENST00000589076 CYP4F30PQ9H0H9 118 aa-0.01□□□□□ -2.41
SMAD4-207ENST00000589076 RERGLQ9H628 205 aa-0.01□□□□□ -2.41
SMAD4-207ENST00000589076 ANKRD26Q9UPS8 1709 aa-0.01□□□□□ -2.41
SMAD4-207ENST00000589076 MRC1P22897 1456 aa-0.02□□□□□ -2.41
SMAD4-207ENST00000589076 HCG22E2RYF7 251 aa-0.02□□□□□ -2.41
SMAD4-207ENST00000589076 CFDP00746 253 aaPredicted RBP-0.02□□□□□ -2.41
SMAD4-207ENST00000589076 Q6AWC8 147 aa-0.02□□□□□ -2.41
SMAD4-207ENST00000589076 SNRNP25Q9BV90 132 aaKnown RBP-0.02□□□□□ -2.41
SMAD4-207ENST00000589076 LINC00470Q9BZP3 86 aa-0.02□□□□□ -2.41
SMAD4-207ENST00000589076 AGPAT4-IT1Q9H0P7 198 aa-0.02□□□□□ -2.41
SMAD4-207ENST00000589076 PRO0255Q9UI72 69 aa-0.02□□□□□ -2.41
SMAD4-207ENST00000589076 SERP1Q9Y6X1 66 aa-0.02□□□□□ -2.41
SMAD4-207ENST00000589076 R4GMQ9 66 aa-0.02□□□□□ -2.41
SMAD4-207ENST00000589076 ZNF236Q9UL36 1845 aa-0.02□□□□□ -2.41
SMAD4-207ENST00000589076 FAM25AB3EWG3 89 aa-0.03□□□□□ -2.41
SMAD4-207ENST00000589076 FAM25CB3EWG5 89 aa-0.03□□□□□ -2.41
SMAD4-207ENST00000589076 FAM25GB3EWG6 89 aa-0.03□□□□□ -2.41
SMAD4-207ENST00000589076 PPP1R17O96001 155 aa-0.03□□□□□ -2.41
SMAD4-207ENST00000589076 SMR3BP02814 79 aaPredicted RBP-0.03□□□□□ -2.41
SMAD4-207ENST00000589076 Q8N8P6 123 aa-0.03□□□□□ -2.41
SMAD4-207ENST00000589076 KIF21AQ7Z4S6 1674 aa-0.03□□□□□ -2.41
SMAD4-207ENST00000589076 KDM5DQ9BY66 1539 aa-0.03□□□□□ -2.41
SMAD4-207ENST00000589076 NDUFA2O43678 99 aa-0.04□□□□□ -2.42
SMAD4-207ENST00000589076 RBM3P98179 157 aaKnown RBP-0.04□□□□□ -2.42
SMAD4-207ENST00000589076 LSM10Q969L4 123 aaKnown RBP-0.04□□□□□ -2.42
SMAD4-207ENST00000589076 NPVFQ9HCQ7 196 aa-0.04□□□□□ -2.42
SMAD4-207ENST00000589076 LENEPQ9Y5L5 61 aa-0.04□□□□□ -2.42
SMAD4-207ENST00000589076 PSME4Q14997 1843 aa-0.04□□□□□ -2.42
SMAD4-207ENST00000589076 C10orf128Q5T292 105 aa-0.05□□□□□ -2.42
SMAD4-207ENST00000589076 SMIM4Q8WVI0 70 aa-0.05□□□□□ -2.42
SMAD4-207ENST00000589076 TSC22D3Q99576 134 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms