RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 TRBV24-1A0A075B6N3 115 aa2.39□□□□□ -2.03
VMP1-205ENST00000587470 IGKV2-28A0A075B6P5 120 aa2.39□□□□□ -2.03
VMP1-205ENST00000587470 TRAV8-6A0A0B4J262 113 aa2.39□□□□□ -2.03
VMP1-205ENST00000587470 TRBV27A0A0K0K1C4 114 aa2.39□□□□□ -2.03
VMP1-205ENST00000587470 SDHAF1A6NFY7 115 aa2.39□□□□□ -2.03
VMP1-205ENST00000587470 IGKV2D-28P01615 120 aa2.39□□□□□ -2.03
VMP1-205ENST00000587470 IGHV3-30P01768 117 aa2.39□□□□□ -2.03
VMP1-205ENST00000587470 IGHV3-33P01772 117 aa2.39□□□□□ -2.03
VMP1-205ENST00000587470 IGHV3-30-3P0DP02 117 aa2.39□□□□□ -2.03
VMP1-205ENST00000587470 IGHV3-30-5P0DP03 117 aa2.39□□□□□ -2.03
VMP1-205ENST00000587470 ESDP10768 282 aa2.39□□□□□ -2.03
VMP1-205ENST00000587470 HBBP68871 147 aa2.39□□□□□ -2.03
VMP1-205ENST00000587470 ORMDL2Q53FV1 153 aa2.39□□□□□ -2.03
VMP1-205ENST00000587470 MPV17L2Q567V2 206 aa2.39□□□□□ -2.03
VMP1-205ENST00000587470 TTC32Q5I0X7 151 aa2.39□□□□□ -2.03
VMP1-205ENST00000587470 OR10J3Q5JRS4 329 aa2.39□□□□□ -2.03
VMP1-205ENST00000587470 KRTAP26-1Q6PEX3 210 aa2.39□□□□□ -2.03
VMP1-205ENST00000587470 ENHOQ6UWT2 76 aa2.39□□□□□ -2.03
VMP1-205ENST00000587470 SMIM15Q7Z3B0 74 aa2.39□□□□□ -2.03
VMP1-205ENST00000587470 ATP5L2Q7Z4Y8 100 aa2.39□□□□□ -2.03
VMP1-205ENST00000587470 SLC7A5P1Q8MH63 180 aa2.39□□□□□ -2.03
VMP1-205ENST00000587470 DEFB104AQ8WTQ1 72 aa2.39□□□□□ -2.03
VMP1-205ENST00000587470 MRAP2Q96G30 205 aa2.39□□□□□ -2.03
VMP1-205ENST00000587470 BTF3L4Q96K17 158 aa2.39□□□□□ -2.03
VMP1-205ENST00000587470 YPEL4Q96NS1 127 aa2.39□□□□□ -2.03
VMP1-205ENST00000587470 CHCHD7Q9BUK0 85 aa2.39□□□□□ -2.03
VMP1-205ENST00000587470 LRP1BQ9NZR2 4599 aa2.39□□□□□ -2.03
VMP1-205ENST00000587470 HMCN2Q8NDA2 5059 aa2.38□□□□□ -2.03
VMP1-205ENST00000587470 IGLV4-60A0A075B6I1 120 aa2.38□□□□□ -2.03
VMP1-205ENST00000587470 TRBV25-1A0A075B6N4 114 aa2.38□□□□□ -2.03
VMP1-205ENST00000587470 TRAV9-1A0A075B6T8 112 aa2.38□□□□□ -2.03
VMP1-205ENST00000587470 IGHV1-24A0A0C4DH33 117 aa2.38□□□□□ -2.03
VMP1-205ENST00000587470 LRCOL1A6NCL2 159 aa2.38□□□□□ -2.03
VMP1-205ENST00000587470 NCR2O95944 276 aa2.38□□□□□ -2.03
VMP1-205ENST00000587470 NPYP01303 97 aa2.38□□□□□ -2.03
VMP1-205ENST00000587470 PPBPP02775 128 aa2.38□□□□□ -2.03
VMP1-205ENST00000587470 RBX1P62877 108 aa2.38□□□□□ -2.03
VMP1-205ENST00000587470 COTL1Q14019 142 aa2.38□□□□□ -2.03
VMP1-205ENST00000587470 WFDC2Q14508 124 aa2.38□□□□□ -2.03
VMP1-205ENST00000587470 RHEBQ15382 184 aa2.38□□□□□ -2.03
VMP1-205ENST00000587470 TMEM97Q5BJF2 176 aa2.38□□□□□ -2.03
VMP1-205ENST00000587470 TMEM136Q6ZRR5 245 aa2.38□□□□□ -2.03
VMP1-205ENST00000587470 SPATA12Q7Z6I5 190 aa2.38□□□□□ -2.03
VMP1-205ENST00000587470 C10orf126Q8N4M7 172 aa2.38□□□□□ -2.03
VMP1-205ENST00000587470 Q8N976 141 aa2.38□□□□□ -2.03
VMP1-205ENST00000587470 BORCS7Q96B45 105 aa2.38□□□□□ -2.03
VMP1-205ENST00000587470 C20orf78Q9BR46 151 aa2.38□□□□□ -2.03
VMP1-205ENST00000587470 TMEM243Q9BU79 118 aa2.38□□□□□ -2.03
VMP1-205ENST00000587470 RNF213Q63HN8 5207 aa2.38□□□□□ -2.03
VMP1-205ENST00000587470 A0A087WTM6 91 aa2.37□□□□□ -2.03
VMP1-205ENST00000587470 A0A087WX48 190 aa2.37□□□□□ -2.03
VMP1-205ENST00000587470 TRAV8-3A0A0A6YYJ7 113 aa2.37□□□□□ -2.03
VMP1-205ENST00000587470 D6R8Y8 96 aa2.37□□□□□ -2.03
VMP1-205ENST00000587470 TMEM262E9PQX1 116 aa2.37□□□□□ -2.03
VMP1-205ENST00000587470 I3L3M4 83 aa2.37□□□□□ -2.03
VMP1-205ENST00000587470 PPP1R17O96001 155 aa2.37□□□□□ -2.03
VMP1-205ENST00000587470 APOC3P02656 99 aa2.37□□□□□ -2.03
VMP1-205ENST00000587470 S100A8P05109 93 aa2.37□□□□□ -2.03
VMP1-205ENST00000587470 CKS2P33552 79 aa2.37□□□□□ -2.03
VMP1-205ENST00000587470 ELOBQ15370 118 aa2.37□□□□□ -2.03
VMP1-205ENST00000587470 FAM19A1Q7Z5A9 133 aa2.37□□□□□ -2.03
VMP1-205ENST00000587470 C15orf56Q8N910 161 aa2.37□□□□□ -2.03
VMP1-205ENST00000587470 UBE2WQ96B02 151 aa2.37□□□□□ -2.03
VMP1-205ENST00000587470 GNB1LQ9BYB4 327 aa2.37□□□□□ -2.03
VMP1-205ENST00000587470 ST20Q9HBF5 79 aa2.37□□□□□ -2.03
VMP1-205ENST00000587470 URGCP-MRPS24S4R325 110 aa2.37□□□□□ -2.03
VMP1-205ENST00000587470 DNAH5Q8TE73 4624 aa2.37□□□□□ -2.03
VMP1-205ENST00000587470 IGLV1-50A0A075B6I6 118 aa2.36□□□□□ -2.03
VMP1-205ENST00000587470 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.36□□□□□ -2.03
VMP1-205ENST00000587470 SMIM26A0A096LP01 95 aa2.36□□□□□ -2.03
VMP1-205ENST00000587470 TGIF2-C20orf24A0A0A6YYL0 155 aa2.36□□□□□ -2.03
VMP1-205ENST00000587470 A0A1B0GVX0 72 aa2.36□□□□□ -2.03
VMP1-205ENST00000587470 IGKV2-29A2NJV5 120 aaPredicted RBP2.36□□□□□ -2.03
VMP1-205ENST00000587470 ANGP03950 147 aaKnown RBP2.36□□□□□ -2.03
VMP1-205ENST00000587470 TLX1NBP0CAT3 122 aa2.36□□□□□ -2.03
VMP1-205ENST00000587470 FGF6P10767 208 aa2.36□□□□□ -2.03
VMP1-205ENST00000587470 FUSP35637 526 aaKnown RBP eCLIP2.36□□□□□ -2.03
VMP1-205ENST00000587470 UBE2AP49459 152 aa2.36□□□□□ -2.03
VMP1-205ENST00000587470 PKIAP61925 76 aa2.36□□□□□ -2.03
VMP1-205ENST00000587470 MRPL52Q86TS9 123 aaKnown RBP2.36□□□□□ -2.03
VMP1-205ENST00000587470 PCP2Q8IVA1 136 aa2.36□□□□□ -2.03
VMP1-205ENST00000587470 ORMDL3Q8N138 153 aa2.36□□□□□ -2.03
VMP1-205ENST00000587470 LINC00269Q8N2A0 174 aa2.36□□□□□ -2.03
VMP1-205ENST00000587470 SVBPQ8N300 66 aa2.36□□□□□ -2.03
VMP1-205ENST00000587470 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.36□□□□□ -2.03
VMP1-205ENST00000587470 PRELID3AQ96N28 172 aa2.36□□□□□ -2.03
VMP1-205ENST00000587470 SMIM2Q9BVW6 85 aa2.36□□□□□ -2.03
VMP1-205ENST00000587470 CDC42SE2Q9NRR3 84 aa2.36□□□□□ -2.03
VMP1-205ENST00000587470 LAMTOR2Q9Y2Q5 125 aa2.36□□□□□ -2.03
VMP1-205ENST00000587470 LINC01546A6NGU7 62 aa2.35□□□□□ -2.03
VMP1-205ENST00000587470 TCAPO15273 167 aa2.35□□□□□ -2.03
VMP1-205ENST00000587470 HLA-DQA1P01909 254 aa2.35□□□□□ -2.03
VMP1-205ENST00000587470 APCSP02743 223 aa2.35□□□□□ -2.03
VMP1-205ENST00000587470 SMR3BP02814 79 aaPredicted RBP2.35□□□□□ -2.03
VMP1-205ENST00000587470 ZNF25P17030 456 aaPredicted RBP2.35□□□□□ -2.03
VMP1-205ENST00000587470 S100PP25815 95 aa2.35□□□□□ -2.03
VMP1-205ENST00000587470 RPL39P62891 51 aaKnown RBP2.35□□□□□ -2.03
VMP1-205ENST00000587470 Q0VG73 95 aa2.35□□□□□ -2.03
VMP1-205ENST00000587470 MIAQ16674 131 aa2.35□□□□□ -2.03
VMP1-205ENST00000587470 NDUFA5Q16718 116 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms