RNA–Protein interactions for RNA: ENST00000585942.5

CACTIN-204, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 1 (best)

Gene CACTIN, Length 2,810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-204ENST00000585942 C19orf73Q9NVV2 129 aa12.98□□□□□ -0.33
CACTIN-204ENST00000585942 C16orf74Q96GX8 76 aa12.97□□□□□ -0.33
CACTIN-204ENST00000585942 Q9HAA7 133 aa12.97□□□□□ -0.33
CACTIN-204ENST00000585942 A0A087WVE0 104 aa12.96□□□□□ -0.33
CACTIN-204ENST00000585942 CSNK1G2-AS1Q8NCQ2 148 aa12.96□□□□□ -0.33
CACTIN-204ENST00000585942 MIR7-3HGQ8N6C7 128 aa12.96□□□□□ -0.34
CACTIN-204ENST00000585942 VWFP04275 2813 aa12.96□□□□□ -0.34
CACTIN-204ENST00000585942 SERP2Q8N6R1 65 aa12.95□□□□□ -0.34
CACTIN-204ENST00000585942 UPK3BQ9BT76 320 aa12.95□□□□□ -0.34
CACTIN-204ENST00000585942 TRBV6-4A0A1B0GX49 114 aa12.94□□□□□ -0.34
CACTIN-204ENST00000585942 FAM222AQ5U5X8 452 aa12.94□□□□□ -0.34
CACTIN-204ENST00000585942 COX7B2Q8TF08 81 aa12.94□□□□□ -0.34
CACTIN-204ENST00000585942 Q5XG85 94 aa12.94□□□□□ -0.34
CACTIN-204ENST00000585942 DNAL4O96015 105 aa12.93□□□□□ -0.34
CACTIN-204ENST00000585942 IGLV1-51P01701 117 aa12.93□□□□□ -0.34
CACTIN-204ENST00000585942 FHL2Q14192 279 aa12.93□□□□□ -0.34
CACTIN-204ENST00000585942 LINC00337Q8N6G1 96 aa12.93□□□□□ -0.34
CACTIN-204ENST00000585942 COPS9Q8WXC6 57 aa12.93□□□□□ -0.34
CACTIN-204ENST00000585942 MALP21145 153 aa12.92□□□□□ -0.34
CACTIN-204ENST00000585942 TRBV6-8A0A0A6YYG3 113 aa12.92□□□□□ -0.34
CACTIN-204ENST00000585942 IGKV2-28A0A075B6P5 120 aa12.91□□□□□ -0.34
CACTIN-204ENST00000585942 IGKV2D-28P01615 120 aa12.91□□□□□ -0.34
CACTIN-204ENST00000585942 DEFB130BP0DP73 79 aa12.91□□□□□ -0.34
CACTIN-204ENST00000585942 DEFB130AP0DP74 79 aa12.91□□□□□ -0.34
CACTIN-204ENST00000585942 LINC00158P58513 81 aa12.91□□□□□ -0.34
CACTIN-204ENST00000585942 OVOL2Q9BRP0 275 aa12.91□□□□□ -0.34
CACTIN-204ENST00000585942 IGHV3OR16-9A0A0B4J2B5 98 aa12.9□□□□□ -0.34
CACTIN-204ENST00000585942 C9orf129Q5T035 196 aaKnown RBP12.9□□□□□ -0.34
CACTIN-204ENST00000585942 SND1-IT1Q9HBX3 110 aa12.9□□□□□ -0.34
CACTIN-204ENST00000585942 C14orf132Q9NPU4 83 aa12.9□□□□□ -0.34
CACTIN-204ENST00000585942 PFN2P35080 140 aa12.89□□□□□ -0.35
CACTIN-204ENST00000585942 USP17L23D6RBM5 183 aa12.89□□□□□ -0.35
CACTIN-204ENST00000585942 KRTAP1-1Q07627 177 aa12.89□□□□□ -0.35
CACTIN-204ENST00000585942 C11orf68Q9H3H3 251 aaKnown RBP12.89□□□□□ -0.35
CACTIN-204ENST00000585942 LINC01561Q8N1V8 128 aa12.89□□□□□ -0.35
CACTIN-204ENST00000585942 LINC00846Q9NV44 126 aa12.89□□□□□ -0.35
CACTIN-204ENST00000585942 HIVEP2P31629 2446 aa12.88□□□□□ -0.35
CACTIN-204ENST00000585942 CRPP02741 224 aa12.87□□□□□ -0.35
CACTIN-204ENST00000585942 Q6JHZ5 121 aa12.87□□□□□ -0.35
CACTIN-204ENST00000585942 CCL18P55774 89 aa12.86□□□□□ -0.35
CACTIN-204ENST00000585942 TRAV13-2A0A0B4J235 113 aa12.86□□□□□ -0.35
CACTIN-204ENST00000585942 CMC4P56277 68 aaPredicted RBP12.86□□□□□ -0.35
CACTIN-204ENST00000585942 RNASE1P07998 156 aaKnown RBP12.85□□□□□ -0.35
CACTIN-204ENST00000585942 RPL28P46779 137 aaKnown RBP12.85□□□□□ -0.35
CACTIN-204ENST00000585942 A0A096LPF7 62 aa12.84□□□□□ -0.35
CACTIN-204ENST00000585942 SMIM11BQ8TCY0 68 aa12.84□□□□□ -0.35
CACTIN-204ENST00000585942 A0A087WYN8 130 aa12.84□□□□□ -0.35
CACTIN-204ENST00000585942 CLPSL2Q6UWE3 100 aa12.84□□□□□ -0.35
CACTIN-204ENST00000585942 A0A087WZ39 114 aa12.84□□□□□ -0.35
CACTIN-204ENST00000585942 C16orf95Q9H693 158 aa12.84□□□□□ -0.35
CACTIN-204ENST00000585942 XCL1P47992 114 aa12.83□□□□□ -0.36
CACTIN-204ENST00000585942 HELZ2Q9BYK8 2649 aaKnown RBP12.83□□□□□ -0.36
CACTIN-204ENST00000585942 LINC00959A0A1B0GUT2 108 aa12.83□□□□□ -0.36
CACTIN-204ENST00000585942 PF4P02776 101 aa12.81□□□□□ -0.36
CACTIN-204ENST00000585942 GYPEP15421 78 aa12.81□□□□□ -0.36
CACTIN-204ENST00000585942 FASNP49327 2511 aaKnown RBP12.8□□□□□ -0.36
CACTIN-204ENST00000585942 UNC79Q9P2D8 2635 aa12.8□□□□□ -0.36
CACTIN-204ENST00000585942 PAX4O43316 350 aa12.8□□□□□ -0.36
CACTIN-204ENST00000585942 C6orf226Q5I0X4 101 aa12.8□□□□□ -0.36
CACTIN-204ENST00000585942 MRAPQ8TCY5 172 aa12.8□□□□□ -0.36
CACTIN-204ENST00000585942 NOTCH2Q04721 2471 aa12.79□□□□□ -0.36
CACTIN-204ENST00000585942 IBA57-AS1B1ANH7 110 aa12.79□□□□□ -0.36
CACTIN-204ENST00000585942 HILS1P60008 231 aa12.78□□□□□ -0.36
CACTIN-204ENST00000585942 SMR3AQ99954 134 aa12.78□□□□□ -0.36
CACTIN-204ENST00000585942 KRTAP10-3P60369 221 aa12.78□□□□□ -0.36
CACTIN-204ENST00000585942 NCR3O14931 201 aa12.77□□□□□ -0.36
CACTIN-204ENST00000585942 TENM1Q9UKZ4 2725 aa12.76□□□□□ -0.37
CACTIN-204ENST00000585942 DEFB4AO15263 64 aa12.75□□□□□ -0.37
CACTIN-204ENST00000585942 SPATA3Q8NHX4 192 aa12.75□□□□□ -0.37
CACTIN-204ENST00000585942 GHRHP01286 108 aa12.75□□□□□ -0.37
CACTIN-204ENST00000585942 SLPIP03973 132 aa12.75□□□□□ -0.37
CACTIN-204ENST00000585942 PRR3P79522 188 aaKnown RBP12.75□□□□□ -0.37
CACTIN-204ENST00000585942 Q8N3U1 123 aa12.75□□□□□ -0.37
CACTIN-204ENST00000585942 LECT2O14960 151 aa12.75□□□□□ -0.37
CACTIN-204ENST00000585942 WFDC9Q8NEX5 89 aa12.75□□□□□ -0.37
CACTIN-204ENST00000585942 OBSCN-AS1Q96MR7 158 aa12.74□□□□□ -0.37
CACTIN-204ENST00000585942 LINC00482Q8N8I6 264 aa12.74□□□□□ -0.37
CACTIN-204ENST00000585942 X6R8D5 127 aa12.74□□□□□ -0.37
CACTIN-204ENST00000585942 TRRAPQ9Y4A5 3859 aa12.73□□□□□ -0.37
CACTIN-204ENST00000585942 TRAV23DV6A0A075B6W5 121 aa12.73□□□□□ -0.37
CACTIN-204ENST00000585942 NDUFC2O95298 119 aa12.72□□□□□ -0.37
CACTIN-204ENST00000585942 C20orf197Q8N268 126 aa12.72□□□□□ -0.37
CACTIN-204ENST00000585942 IGLV10-54A0A075B6I4 117 aa12.71□□□□□ -0.37
CACTIN-204ENST00000585942 SS18Q15532 418 aa12.71□□□□□ -0.37
CACTIN-204ENST00000585942 LINC00612Q8N6U2 182 aa12.71□□□□□ -0.37
CACTIN-204ENST00000585942 LINC00336Q6ZUF6 198 aa12.7□□□□□ -0.38
CACTIN-204ENST00000585942 LINC00269Q8N2A0 174 aa12.7□□□□□ -0.38
CACTIN-204ENST00000585942 OTOGQ6ZRI0 2925 aa12.7□□□□□ -0.38
CACTIN-204ENST00000585942 NDUFC2-KCTD14E9PQ53 114 aa12.7□□□□□ -0.38
CACTIN-204ENST00000585942 H0YGX0 51 aa12.7□□□□□ -0.38
CACTIN-204ENST00000585942 PRO0255Q9UI72 69 aa12.7□□□□□ -0.38
CACTIN-204ENST00000585942 FAM236DA0A1B0GTK5 79 aa12.69□□□□□ -0.38
CACTIN-204ENST00000585942 A0A1B0GUV1 79 aa12.69□□□□□ -0.38
CACTIN-204ENST00000585942 FAM236CP0DP71 79 aa12.69□□□□□ -0.38
CACTIN-204ENST00000585942 C9orf116Q5BN46 136 aaPredicted RBP12.68□□□□□ -0.38
CACTIN-204ENST00000585942 FAM19A1Q7Z5A9 133 aa12.68□□□□□ -0.38
CACTIN-204ENST00000585942 HECTD1Q9ULT8 2610 aa12.68□□□□□ -0.38
CACTIN-204ENST00000585942 PRO0628Q9UI54 55 aa12.67□□□□□ -0.38
CACTIN-204ENST00000585942 Q8IZM0 81 aa12.67□□□□□ -0.38
CACTIN-204ENST00000585942 DEFB135Q30KP9 77 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms