RNA–Protein interactions for RNA: ENST00000585371.1

CHAF1A-202, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-202ENST00000585371 SYS1-DBNDD2H3BUS1 97 aa8.52□□□□□ -1.05
CHAF1A-202ENST00000585371 INAFM2P0DMQ5 153 aa8.52□□□□□ -1.05
CHAF1A-202ENST00000585371 C2orf82Q6UX34 121 aa8.52□□□□□ -1.05
CHAF1A-202ENST00000585371 MAP1LC3CQ9BXW4 147 aa8.52□□□□□ -1.05
CHAF1A-202ENST00000585371 C6orf48Q9UBA6 75 aa8.52□□□□□ -1.05
CHAF1A-202ENST00000585371 TMEM223A0PJW6 202 aa8.51□□□□□ -1.05
CHAF1A-202ENST00000585371 H3BRM9 83 aa8.51□□□□□ -1.05
CHAF1A-202ENST00000585371 C3orf79P0CE67 100 aa8.51□□□□□ -1.05
CHAF1A-202ENST00000585371 CIRBPQ14011 172 aaKnown RBP8.51□□□□□ -1.05
CHAF1A-202ENST00000585371 RNF151Q2KHN1 245 aa8.51□□□□□ -1.05
CHAF1A-202ENST00000585371 TMEM170BQ5T4T1 132 aa8.51□□□□□ -1.05
CHAF1A-202ENST00000585371 PMCHL2Q9BQD1 86 aa8.51□□□□□ -1.05
CHAF1A-202ENST00000585371 TOMM7Q9P0U1 55 aa8.51□□□□□ -1.05
CHAF1A-202ENST00000585371 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.51□□□□□ -1.05
CHAF1A-202ENST00000585371 NDUFA1O15239 70 aa8.5□□□□□ -1.05
CHAF1A-202ENST00000585371 Q5VSD8 79 aa8.5□□□□□ -1.05
CHAF1A-202ENST00000585371 LINC01545Q5VT33 79 aa8.5□□□□□ -1.05
CHAF1A-202ENST00000585371 COX7B2Q8TF08 81 aa8.5□□□□□ -1.05
CHAF1A-202ENST00000585371 A0A096LNI7 61 aa8.49□□□□□ -1.05
CHAF1A-202ENST00000585371 C5orf52A6NGY3 159 aa8.49□□□□□ -1.05
CHAF1A-202ENST00000585371 CHTF8P0CG12 524 aa8.49□□□□□ -1.05
CHAF1A-202ENST00000585371 HAMPP81172 84 aa8.49□□□□□ -1.05
CHAF1A-202ENST00000585371 C6orf226Q5I0X4 101 aa8.49□□□□□ -1.05
CHAF1A-202ENST00000585371 HIST1H2BLQ99880 126 aa8.49□□□□□ -1.05
CHAF1A-202ENST00000585371 TRBV30A0A0K0K1B3 111 aa8.48□□□□□ -1.05
CHAF1A-202ENST00000585371 DPM2O94777 84 aa8.48□□□□□ -1.05
CHAF1A-202ENST00000585371 PRSS2P07478 247 aa8.48□□□□□ -1.05
CHAF1A-202ENST00000585371 PET117Q6UWS5 81 aa8.48□□□□□ -1.05
CHAF1A-202ENST00000585371 IGKCP01834 107 aa8.47□□□□□ -1.05
CHAF1A-202ENST00000585371 TLX1NBP0CAT3 122 aa8.47□□□□□ -1.05
CHAF1A-202ENST00000585371 PLNP26678 52 aa8.47□□□□□ -1.05
CHAF1A-202ENST00000585371 CXCL5P42830 114 aa8.47□□□□□ -1.05
CHAF1A-202ENST00000585371 SNRPEP62304 92 aaKnown RBP8.47□□□□□ -1.05
CHAF1A-202ENST00000585371 C9orf116Q5BN46 136 aaPredicted RBP8.47□□□□□ -1.05
CHAF1A-202ENST00000585371 SCXQ7RTU7 201 aa8.47□□□□□ -1.05
CHAF1A-202ENST00000585371 SPACA4Q8TDM5 124 aa8.47□□□□□ -1.05
CHAF1A-202ENST00000585371 LOC107984640A0A0U1RRK4 108 aa8.46□□□□□ -1.06
CHAF1A-202ENST00000585371 S100A6P06703 90 aa8.46□□□□□ -1.06
CHAF1A-202ENST00000585371 KRTDAPP60985 99 aa8.46□□□□□ -1.06
CHAF1A-202ENST00000585371 CKS1BP61024 79 aa8.46□□□□□ -1.06
CHAF1A-202ENST00000585371 DMBT1Q9UGM3 2413 aaPredicted RBP8.46□□□□□ -1.06
CHAF1A-202ENST00000585371 PTTG1IPP53801 180 aa8.45□□□□□ -1.06
CHAF1A-202ENST00000585371 Q6ZRP5 223 aa8.45□□□□□ -1.06
CHAF1A-202ENST00000585371 CIRBP-AS1Q8TBR5 109 aa8.45□□□□□ -1.06
CHAF1A-202ENST00000585371 FAM229AH3BQW9 127 aa8.44□□□□□ -1.06
CHAF1A-202ENST00000585371 ZNF625Q96I27 306 aaPredicted RBP8.44□□□□□ -1.06
CHAF1A-202ENST00000585371 IGKV2-24A0A0C4DH68 120 aa8.43□□□□□ -1.06
CHAF1A-202ENST00000585371 S100A2P29034 98 aa8.43□□□□□ -1.06
CHAF1A-202ENST00000585371 TSPEAR-AS2P59090 65 aa8.43□□□□□ -1.06
CHAF1A-202ENST00000585371 A0A087WYN8 130 aa8.42□□□□□ -1.06
CHAF1A-202ENST00000585371 SMR3BP02814 79 aaPredicted RBP8.42□□□□□ -1.06
CHAF1A-202ENST00000585371 GAGE2BQ13066 116 aa8.42□□□□□ -1.06
CHAF1A-202ENST00000585371 PLAC8Q9NZF1 115 aa8.42□□□□□ -1.06
CHAF1A-202ENST00000585371 PKIGQ9Y2B9 76 aa8.42□□□□□ -1.06
CHAF1A-202ENST00000585371 NDUFC2-KCTD14E9PQ53 114 aa8.41□□□□□ -1.06
CHAF1A-202ENST00000585371 LEPROTO15243 131 aa8.41□□□□□ -1.06
CHAF1A-202ENST00000585371 RPL18AQ02543 176 aaKnown RBP8.41□□□□□ -1.06
CHAF1A-202ENST00000585371 MAJINQ3KP22 176 aa8.41□□□□□ -1.06
CHAF1A-202ENST00000585371 FAT1Q14517 4588 aa8.41□□□□□ -1.06
CHAF1A-202ENST00000585371 A0A1W2PNN7 141 aa8.4□□□□□ -1.06
CHAF1A-202ENST00000585371 STPG4Q8N801 248 aa8.4□□□□□ -1.06
CHAF1A-202ENST00000585371 HERC1Q15751 4861 aa8.4□□□□□ -1.07
CHAF1A-202ENST00000585371 E9PLD3 99 aa8.39□□□□□ -1.07
CHAF1A-202ENST00000585371 C9orf129Q5T035 196 aaKnown RBP8.39□□□□□ -1.07
CHAF1A-202ENST00000585371 KRTAP7-1Q8IUC3 87 aa8.39□□□□□ -1.07
CHAF1A-202ENST00000585371 PLEKHB2Q96CS7 222 aa8.39□□□□□ -1.07
CHAF1A-202ENST00000585371 LINC00474Q9P2X8 69 aa8.39□□□□□ -1.07
CHAF1A-202ENST00000585371 HERVK_113P61574 105 aa8.38□□□□□ -1.07
CHAF1A-202ENST00000585371 GAGE2EQ4V326 116 aa8.38□□□□□ -1.07
CHAF1A-202ENST00000585371 GAGE2DQ9UEU5 116 aa8.38□□□□□ -1.07
CHAF1A-202ENST00000585371 IGKV2D-26A0A0A0MRZ7 120 aa8.37□□□□□ -1.07
CHAF1A-202ENST00000585371 C20orf202A1L168 122 aa8.37□□□□□ -1.07
CHAF1A-202ENST00000585371 J3QQQ9 107 aa8.37□□□□□ -1.07
CHAF1A-202ENST00000585371 SFTA2Q6UW10 78 aa8.37□□□□□ -1.07
CHAF1A-202ENST00000585371 ATOH7Q8N100 152 aa8.37□□□□□ -1.07
CHAF1A-202ENST00000585371 NDUFA12Q9UI09 145 aa8.37□□□□□ -1.07
CHAF1A-202ENST00000585371 ERG28Q9UKR5 140 aa8.37□□□□□ -1.07
CHAF1A-202ENST00000585371 VPS13BQ7Z7G8 4022 aa8.37□□□□□ -1.07
CHAF1A-202ENST00000585371 FLG2Q5D862 2391 aaPredicted RBP8.36□□□□□ -1.07
CHAF1A-202ENST00000585371 FAM168BA1KXE4 195 aa8.36□□□□□ -1.07
CHAF1A-202ENST00000585371 PFN2P35080 140 aa8.35□□□□□ -1.07
CHAF1A-202ENST00000585371 ANKRD39Q53RE8 183 aa8.35□□□□□ -1.07
CHAF1A-202ENST00000585371 DPH3Q96FX2 82 aa8.35□□□□□ -1.07
CHAF1A-202ENST00000585371 XAGE1AQ9HD64 81 aa8.35□□□□□ -1.07
CHAF1A-202ENST00000585371 TMA7Q9Y2S6 64 aaKnown RBP8.35□□□□□ -1.07
CHAF1A-202ENST00000585371 SRRM2Q9UQ35 2752 aaKnown RBP8.35□□□□□ -1.07
CHAF1A-202ENST00000585371 J3QL48 77 aa8.34□□□□□ -1.07
CHAF1A-202ENST00000585371 KRTAP10-4P60372 401 aaPredicted RBP8.34□□□□□ -1.07
CHAF1A-202ENST00000585371 HERV-K104P63124 156 aa8.34□□□□□ -1.07
CHAF1A-202ENST00000585371 COX17Q14061 63 aa8.34□□□□□ -1.07
CHAF1A-202ENST00000585371 MYMXA0A1B0GTQ4 84 aa8.33□□□□□ -1.08
CHAF1A-202ENST00000585371 PLA2G1BP04054 148 aaKnown RBP8.33□□□□□ -1.08
CHAF1A-202ENST00000585371 LGALS3P17931 250 aaKnown RBP8.33□□□□□ -1.08
CHAF1A-202ENST00000585371 NMUP48645 174 aa8.33□□□□□ -1.08
CHAF1A-202ENST00000585371 SERTAD4-AS1Q5TG53 156 aa8.33□□□□□ -1.08
CHAF1A-202ENST00000585371 LINC00528Q8N1L1 170 aa8.33□□□□□ -1.08
CHAF1A-202ENST00000585371 SMIM13P0DJ93 91 aa8.32□□□□□ -1.08
CHAF1A-202ENST00000585371 AKR1D1P51857 326 aa8.32□□□□□ -1.08
CHAF1A-202ENST00000585371 TTTY13Q9BZ97 58 aa8.32□□□□□ -1.08
CHAF1A-202ENST00000585371 MYCBP2O75592 4640 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms