RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 GAGE2DQ9UEU5 116 aa6.82□□□□□ -1.32
CCDC47-206ENST00000584112 TRAV9-1A0A075B6T8 112 aa6.81□□□□□ -1.32
CCDC47-206ENST00000584112 PRSS2P07478 247 aa6.81□□□□□ -1.32
CCDC47-206ENST00000584112 SEC11AP67812 179 aa6.81□□□□□ -1.32
CCDC47-206ENST00000584112 FAM19A3Q7Z5A8 133 aa6.81□□□□□ -1.32
CCDC47-206ENST00000584112 FAM168BA1KXE4 195 aa6.8□□□□□ -1.32
CCDC47-206ENST00000584112 IGIPA6NJ69 53 aa6.8□□□□□ -1.32
CCDC47-206ENST00000584112 NDUFC2-KCTD14E9PQ53 114 aa6.8□□□□□ -1.32
CCDC47-206ENST00000584112 HERVK_113P63121 156 aa6.8□□□□□ -1.32
CCDC47-206ENST00000584112 C2orf82Q6UX34 121 aa6.8□□□□□ -1.32
CCDC47-206ENST00000584112 FAM19A5Q7Z5A7 132 aaPredicted RBP6.8□□□□□ -1.32
CCDC47-206ENST00000584112 TIMM17AQ99595 171 aa6.8□□□□□ -1.32
CCDC47-206ENST00000584112 H3BS24 57 aa6.79□□□□□ -1.32
CCDC47-206ENST00000584112 IGLV7-43P04211 117 aa6.79□□□□□ -1.32
CCDC47-206ENST00000584112 CKS1BP61024 79 aa6.79□□□□□ -1.32
CCDC47-206ENST00000584112 ZC2HC1BQ5TFG8 222 aa6.79□□□□□ -1.32
CCDC47-206ENST00000584112 Q8IZM0 81 aa6.79□□□□□ -1.32
CCDC47-206ENST00000584112 DIRC1Q969H9 104 aa6.79□□□□□ -1.32
CCDC47-206ENST00000584112 TOMM6Q96B49 74 aa6.79□□□□□ -1.32
CCDC47-206ENST00000584112 TOMM7Q9P0U1 55 aa6.79□□□□□ -1.32
CCDC47-206ENST00000584112 TMEM218A2RU14 115 aa6.78□□□□□ -1.32
CCDC47-206ENST00000584112 LINC01549A6NIU2 74 aa6.78□□□□□ -1.32
CCDC47-206ENST00000584112 M0QXV9 152 aa6.78□□□□□ -1.32
CCDC47-206ENST00000584112 ADCYAP1P18509 176 aa6.78□□□□□ -1.32
CCDC47-206ENST00000584112 S100PP25815 95 aa6.78□□□□□ -1.32
CCDC47-206ENST00000584112 UBE2BP63146 152 aa6.78□□□□□ -1.32
CCDC47-206ENST00000584112 KIAA1644Q3SXP7 199 aa6.78□□□□□ -1.32
CCDC47-206ENST00000584112 C6orf226Q5I0X4 101 aa6.78□□□□□ -1.32
CCDC47-206ENST00000584112 ALKBH7Q9BT30 221 aaPredicted RBP6.78□□□□□ -1.32
CCDC47-206ENST00000584112 GEMIN7Q9H840 131 aaKnown RBP6.78□□□□□ -1.32
CCDC47-206ENST00000584112 ERASQ7Z444 233 aa6.77□□□□□ -1.33
CCDC47-206ENST00000584112 SEC11CQ9BY50 192 aa6.77□□□□□ -1.33
CCDC47-206ENST00000584112 GNB1LQ9BYB4 327 aa6.77□□□□□ -1.33
CCDC47-206ENST00000584112 CXCL5P42830 114 aa6.76□□□□□ -1.33
CCDC47-206ENST00000584112 COX19Q49B96 90 aa6.76□□□□□ -1.33
CCDC47-206ENST00000584112 C9orf129Q5T035 196 aaKnown RBP6.76□□□□□ -1.33
CCDC47-206ENST00000584112 SCGB3A1Q96QR1 104 aa6.76□□□□□ -1.33
CCDC47-206ENST00000584112 CDKN2A-AS1Q9UH64 79 aa6.76□□□□□ -1.33
CCDC47-206ENST00000584112 F8VRH5 84 aa6.75□□□□□ -1.33
CCDC47-206ENST00000584112 H0Y9J4 135 aa6.75□□□□□ -1.33
CCDC47-206ENST00000584112 LINC01546A6NGU7 62 aa6.74□□□□□ -1.33
CCDC47-206ENST00000584112 IFITM2Q01629 132 aa6.74□□□□□ -1.33
CCDC47-206ENST00000584112 C21orf62-AS1Q17RA5 79 aa6.74□□□□□ -1.33
CCDC47-206ENST00000584112 KRTAP11-1Q8IUC1 163 aa6.74□□□□□ -1.33
CCDC47-206ENST00000584112 KRTAP7-1Q8IUC3 87 aa6.74□□□□□ -1.33
CCDC47-206ENST00000584112 LINC00469Q8N7U9 141 aa6.74□□□□□ -1.33
CCDC47-206ENST00000584112 TINCRA0A1B0GVN0 87 aa6.73□□□□□ -1.33
CCDC47-206ENST00000584112 PDZD11Q5EBL8 140 aa6.73□□□□□ -1.33
CCDC47-206ENST00000584112 SMCO4Q9NRQ5 59 aa6.73□□□□□ -1.33
CCDC47-206ENST00000584112 SMIM1B2RUZ4 78 aa6.72□□□□□ -1.33
CCDC47-206ENST00000584112 RHEBQ15382 184 aa6.72□□□□□ -1.33
CCDC47-206ENST00000584112 LBHQ53QV2 105 aaPredicted RBP6.72□□□□□ -1.33
CCDC47-206ENST00000584112 FA2HQ7L5A8 372 aa6.72□□□□□ -1.33
CCDC47-206ENST00000584112 COMMD7Q86VX2 200 aa6.72□□□□□ -1.33
CCDC47-206ENST00000584112 IGLV1-50A0A075B6I6 118 aa6.71□□□□□ -1.34
CCDC47-206ENST00000584112 IGLV5-45A0A087WSX0 123 aa6.71□□□□□ -1.34
CCDC47-206ENST00000584112 NUPR1O60356 82 aa6.71□□□□□ -1.34
CCDC47-206ENST00000584112 FABP9Q0Z7S8 132 aa6.71□□□□□ -1.34
CCDC47-206ENST00000584112 PMVKQ15126 192 aa6.71□□□□□ -1.34
CCDC47-206ENST00000584112 COX7B2Q8TF08 81 aa6.71□□□□□ -1.34
CCDC47-206ENST00000584112 XAGE1AQ9HD64 81 aa6.71□□□□□ -1.34
CCDC47-206ENST00000584112 C10orf91Q5T1B1 145 aa6.7□□□□□ -1.34
CCDC47-206ENST00000584112 PRR26Q8N8Z3 221 aa6.7□□□□□ -1.34
CCDC47-206ENST00000584112 CST9LQ9H4G1 147 aa6.7□□□□□ -1.34
CCDC47-206ENST00000584112 RPS10P5Q9NQ39 176 aa6.7□□□□□ -1.34
CCDC47-206ENST00000584112 TP73-AS1Q9UF72 201 aa6.7□□□□□ -1.34
CCDC47-206ENST00000584112 C22orf24Q9Y442 160 aa6.7□□□□□ -1.34
CCDC47-206ENST00000584112 H3BRM9 83 aa6.69□□□□□ -1.34
CCDC47-206ENST00000584112 CARHSP1Q9Y2V2 147 aaKnown RBP6.69□□□□□ -1.34
CCDC47-206ENST00000584112 ZNF861PO60384 105 aa6.68□□□□□ -1.34
CCDC47-206ENST00000584112 KRTAP1-4P0C5Y4 121 aa6.68□□□□□ -1.34
CCDC47-206ENST00000584112 SPINK8P0C7L1 97 aa6.68□□□□□ -1.34
CCDC47-206ENST00000584112 RPL13AP40429 203 aaKnown RBP6.68□□□□□ -1.34
CCDC47-206ENST00000584112 MRPL55Q7Z7F7 128 aaKnown RBP6.68□□□□□ -1.34
CCDC47-206ENST00000584112 ATP5LO75964 103 aa6.66□□□□□ -1.34
CCDC47-206ENST00000584112 TRAPPC1Q9Y5R8 145 aa6.66□□□□□ -1.34
CCDC47-206ENST00000584112 LINC00614P0C842 121 aa6.65□□□□□ -1.34
CCDC47-206ENST00000584112 IGLC3P0DOY3 106 aa6.65□□□□□ -1.34
CCDC47-206ENST00000584112 RPL28P46779 137 aaKnown RBP6.65□□□□□ -1.34
CCDC47-206ENST00000584112 NDUFA6P56556 154 aa6.65□□□□□ -1.34
CCDC47-206ENST00000584112 RAB5BP61020 215 aa6.65□□□□□ -1.34
CCDC47-206ENST00000584112 PRR4Q16378 134 aa6.65□□□□□ -1.34
CCDC47-206ENST00000584112 NKAPP1Q8N9T2 125 aa6.65□□□□□ -1.34
CCDC47-206ENST00000584112 MUC17Q685J3 4493 aa6.64□□□□□ -1.35
CCDC47-206ENST00000584112 BCE1O60756 84 aa6.64□□□□□ -1.35
CCDC47-206ENST00000584112 HBDP02042 147 aa6.64□□□□□ -1.35
CCDC47-206ENST00000584112 C18orf32Q8TCD1 76 aa6.64□□□□□ -1.35
CCDC47-206ENST00000584112 LINC00167Q96N53 147 aa6.64□□□□□ -1.35
CCDC47-206ENST00000584112 IGLV5-37A0A075B6J1 123 aa6.63□□□□□ -1.35
CCDC47-206ENST00000584112 A0A096LNJ9 63 aa6.63□□□□□ -1.35
CCDC47-206ENST00000584112 IGLV5-39A0A0G2JS06 123 aa6.63□□□□□ -1.35
CCDC47-206ENST00000584112 NDUFA5Q16718 116 aa6.63□□□□□ -1.35
CCDC47-206ENST00000584112 SSPOA2VEC9 5147 aa6.63□□□□□ -1.35
CCDC47-206ENST00000584112 RPL37AP8A6NKH3 93 aa6.62□□□□□ -1.35
CCDC47-206ENST00000584112 SNAPINO95295 136 aa6.62□□□□□ -1.35
CCDC47-206ENST00000584112 APOC3P02656 99 aa6.62□□□□□ -1.35
CCDC47-206ENST00000584112 ZNF22P17026 224 aaPredicted RBP6.62□□□□□ -1.35
CCDC47-206ENST00000584112 LINC01547P58512 204 aaPredicted RBP6.62□□□□□ -1.35
CCDC47-206ENST00000584112 SFTA2Q6UW10 78 aa6.62□□□□□ -1.35
CCDC47-206ENST00000584112 SVBPQ8N300 66 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms